TIGD7 14564

Name: TIGD7	Sequence: fasta or formatted (549aa)		NCBI GI: 22325392
Description: tigger transposable element derived 7		Referenced in: DNA Transposon and Retrovirus-related Sequences
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.7 26 3 C cysteine 1.8 10 1 D aspartate 5.6 31 3 E glutamate 8.7 48 2 F phenylalanine 5.6 31 2 G glycine 6.0 33 2 H histidine 2.0 11 1 I isoleucine 5.3 29 3 K lysine 10.9 60 2 L leucine 9.1 50 4 M methionine 1.8 10 1 N asparagine 3.6 20 1 P proline 3.3 18 1 Q glutamine 4.2 23 2 R arginine 5.5 30 1 S serine 8.0 44 2 T threonine 4.2 23 2 V valine 5.3 29 2 W tryptophan 1.8 10 1 Y tyrosine 2.4 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tigger transposable element derived 7 JRKL 0.203 jerky homolog-like TIGD2 0.194 tigger transposable element derived 2 JRK 0.160 jerky isoform a JRK 0.160 jerky isoform b TIGD6 0.152 hypothetical protein LOC81789 TIGD1 0.142 hypothetical protein LOC200765 TIGD4 0.122 tigger transposable element derived 4 TIGD5 0.105 tigger transposable element derived 5 CENPB 0.080 centromere protein B LOC100291289 0.060 PREDICTED: hypothetical protein XP_002347296 LOC100287896 0.060 PREDICTED: hypothetical protein XP_002343159 LOC100293487 0.058 PREDICTED: similar to cag TIGD3 0.043 tigger transposable element derived 3 MGC16385 0.018 hypothetical protein LOC92806 EPB41L2 0.010 erythrocyte membrane protein band 4.1-like 2 isofor... EPB41L2 0.010 erythrocyte membrane protein band 4.1-like 2 isofor... EPB41L2 0.010 erythrocyte membrane protein band 4.1-like 2 isoform ... POGK 0.009 pogo transposable element with KRAB domain LOC100293326 0.007 PREDICTED: similar to hCG1802057 LOC100291015 0.007 PREDICTED: hypothetical protein XP_002347719 LOC100288326 0.007 PREDICTED: hypothetical protein XP_002344143 KIF20B 0.007 M-phase phosphoprotein 1 WDR87 0.007 NYD-SP11 protein SYNE2 0.007 spectrin repeat containing, nuclear envelope 2 isof... SYNE2 0.007 spectrin repeat containing, nuclear envelope 2 isof... DNAH7 0.006 dynein, axonemal, heavy chain 7 BRAP 0.005 BRCA1 associated protein PALM3 0.005 hypothetical protein LOC342979 C14orf145 0.005 hypothetical protein LOC145508 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.