POGK 13946

Name: POGK	Sequence: fasta or formatted (609aa)		NCBI GI: 22027480
Description: pogo transposable element with KRAB domain		Referenced in: DNA Transposon and Retrovirus-related Sequences
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 38 2 C cysteine 1.1 7 1 D aspartate 5.4 33 2 E glutamate 9.9 60 7 F phenylalanine 3.3 20 1 G glycine 6.7 41 3 H histidine 1.3 8 1 I isoleucine 3.6 22 2 K lysine 5.3 32 2 L leucine 8.9 54 2 M methionine 4.4 27 2 N asparagine 3.9 24 2 P proline 6.7 41 2 Q glutamine 4.8 29 2 R arginine 6.4 39 3 S serine 6.2 38 2 T threonine 3.8 23 1 V valine 6.6 40 3 W tryptophan 2.3 14 1 Y tyrosine 3.1 19 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 pogo transposable element with KRAB domain POGZ 0.072 pogo transposable element with ZNF domain isoform 1 ... POGZ 0.072 pogo transposable element with ZNF domain isoform 2 ... ZNF619 0.044 zinc finger protein 619 isoform 2 LOC100293029 0.043 PREDICTED: similar to zinc finger protein 30 LOC100290062 0.043 PREDICTED: hypothetical protein XP_002346980 LOC100289678 0.043 PREDICTED: hypothetical protein XP_002342831 LOC100289678 0.043 PREDICTED: similar to zinc finger protein 30 ZNF777 0.038 zinc finger protein 777 TIGD6 0.038 hypothetical protein LOC81789 ZNF620 0.037 zinc finger protein 620 ZNF398 0.037 zinc finger 398 isoform a ZNF425 0.036 zinc finger protein 425 ZNF862 0.035 zinc finger protein 862 ZNF786 0.034 zinc finger protein 786 ZNF662 0.034 zinc finger protein 662 isoform 2 TIGD4 0.033 tigger transposable element derived 4 ZNF707 0.033 zinc finger protein 707 ZNF707 0.033 zinc finger protein 707 ZNF707 0.033 zinc finger protein 707 ZNF311 0.032 zinc finger protein 311 ZNF251 0.032 zinc finger protein 251 ZNF780A 0.032 zinc finger protein 780A isoform c ZNF621 0.031 zinc finger protein 621 ZNF621 0.031 zinc finger protein 621 ZNF785 0.030 zinc finger protein 785 ZNF780A 0.030 zinc finger protein 780A isoform b ZNF780A 0.030 zinc finger protein 780A isoform b ZNF75A 0.030 zinc finger protein 75a ZNF2 0.029 zinc finger protein 2 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.