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Search of human proteins with 60302873
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|60302873 shugoshin-like 1 isoform B2 [Homo sapiens]
(309 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|60302873 shugoshin-like 1 isoform B2 [Homo sapiens] 616 e-177
gi|24308448 shugoshin-like 1 isoform C2 [Homo sapiens] 571 e-163
gi|60302877 shugoshin-like 1 isoform B1 [Homo sapiens] 535 e-152
gi|60302879 shugoshin-like 1 isoform C1 [Homo sapiens] 489 e-138
gi|60302875 shugoshin-like 1 isoform A1 [Homo sapiens] 350 1e-96
gi|60302870 shugoshin-like 1 isoform A2 [Homo sapiens] 350 1e-96
gi|154350244 hypothetical protein LOC79632 isoform 2 [Homo sapiens] 39 0.004
gi|154350226 hypothetical protein LOC79632 isoform 1 [Homo sapiens] 39 0.004
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 34 0.14
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 34 0.19
gi|29826321 adducin 1 (alpha) isoform b [Homo sapiens] 33 0.25
gi|29826319 adducin 1 (alpha) isoform a [Homo sapiens] 33 0.25
gi|145699123 dedicator of cytokinesis 11 [Homo sapiens] 33 0.25
gi|122891870 melanoma inhibitory activity family, member 3 [Homo... 33 0.32
gi|32698688 citron [Homo sapiens] 33 0.42
gi|21264345 peripherin [Homo sapiens] 33 0.42
gi|134133246 hypothetical protein LOC285753 [Homo sapiens] 32 0.55
gi|28603844 hypothetical protein LOC285753 [Homo sapiens] 32 0.55
gi|34878777 ring finger protein 20 [Homo sapiens] 32 0.71
gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens] 32 0.93
gi|16445033 ACRC protein [Homo sapiens] 32 0.93
gi|110815815 centlein isoform 1 [Homo sapiens] 32 0.93
gi|167555106 centlein isoform 2 [Homo sapiens] 32 0.93
gi|218082953 autophagy-related protein 13 isoform 1 [Homo sapiens] 31 1.2
gi|41281462 autophagy-related protein 13 isoform 2 [Homo sapiens] 31 1.2
gi|42794779 myosin 18A isoform b [Homo sapiens] 31 1.6
gi|28416946 myosin 18A isoform a [Homo sapiens] 31 1.6
gi|110349719 titin isoform N2-A [Homo sapiens] 30 2.1
gi|4505579 furin preproprotein [Homo sapiens] 30 2.1
gi|9506603 spermatogenesis associated 6 [Homo sapiens] 30 2.1
>gi|60302873 shugoshin-like 1 isoform B2 [Homo sapiens]
Length = 309
Score = 616 bits (1589), Expect = e-177
Identities = 309/309 (100%), Positives = 309/309 (100%)
Query: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
Sbjct: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
Query: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
Sbjct: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
Query: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSATPPE 180
GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSATPPE
Sbjct: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSATPPE 180
Query: 181 TQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASK 240
TQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASK
Sbjct: 181 TQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASK 240
Query: 241 LRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEVSPAKEAIFILYYVREFVSRFPDCRKC 300
LRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEVSPAKEAIFILYYVREFVSRFPDCRKC
Sbjct: 241 LRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEVSPAKEAIFILYYVREFVSRFPDCRKC 300
Query: 301 KLETHICLR 309
KLETHICLR
Sbjct: 301 KLETHICLR 309
>gi|24308448 shugoshin-like 1 isoform C2 [Homo sapiens]
Length = 292
Score = 571 bits (1471), Expect = e-163
Identities = 292/309 (94%), Positives = 292/309 (94%), Gaps = 17/309 (5%)
Query: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
Sbjct: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
Query: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
Sbjct: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
Query: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSATPPE 180
GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIE ATPPE
Sbjct: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIE-----------------ATPPE 163
Query: 181 TQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASK 240
TQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASK
Sbjct: 164 TQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASK 223
Query: 241 LRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEVSPAKEAIFILYYVREFVSRFPDCRKC 300
LRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEVSPAKEAIFILYYVREFVSRFPDCRKC
Sbjct: 224 LRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEVSPAKEAIFILYYVREFVSRFPDCRKC 283
Query: 301 KLETHICLR 309
KLETHICLR
Sbjct: 284 KLETHICLR 292
>gi|60302877 shugoshin-like 1 isoform B1 [Homo sapiens]
Length = 275
Score = 535 bits (1378), Expect = e-152
Identities = 269/274 (98%), Positives = 271/274 (98%)
Query: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
Sbjct: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
Query: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
Sbjct: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
Query: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSATPPE 180
GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSATPPE
Sbjct: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSATPPE 180
Query: 181 TQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASK 240
TQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASK
Sbjct: 181 TQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASK 240
Query: 241 LRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEV 274
LRRGDPFTDLCFLNSPIFKQKKDLRRSKK ++
Sbjct: 241 LRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQI 274
>gi|60302879 shugoshin-like 1 isoform C1 [Homo sapiens]
Length = 258
Score = 489 bits (1260), Expect = e-138
Identities = 252/274 (91%), Positives = 254/274 (92%), Gaps = 17/274 (6%)
Query: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
Sbjct: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
Query: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
Sbjct: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
Query: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSATPPE 180
GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIE ATPPE
Sbjct: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIE-----------------ATPPE 163
Query: 181 TQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASK 240
TQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASK
Sbjct: 164 TQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASK 223
Query: 241 LRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEV 274
LRRGDPFTDLCFLNSPIFKQKKDLRRSKK ++
Sbjct: 224 LRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQI 257
>gi|60302875 shugoshin-like 1 isoform A1 [Homo sapiens]
Length = 527
Score = 350 bits (897), Expect = 1e-96
Identities = 176/181 (97%), Positives = 176/181 (97%)
Query: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
Sbjct: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
Query: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
Sbjct: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
Query: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSATPPE 180
GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDS
Sbjct: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSGEAKS 180
Query: 181 T 181
T
Sbjct: 181 T 181
Score = 189 bits (480), Expect = 3e-48
Identities = 93/100 (93%), Positives = 96/100 (96%)
Query: 175 SATPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKE 234
+ TPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKE
Sbjct: 427 TTTPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKE 486
Query: 235 PTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEV 274
PTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKK ++
Sbjct: 487 PTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQI 526
>gi|60302870 shugoshin-like 1 isoform A2 [Homo sapiens]
Length = 561
Score = 350 bits (897), Expect = 1e-96
Identities = 176/181 (97%), Positives = 176/181 (97%)
Query: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN
Sbjct: 1 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 60
Query: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS
Sbjct: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 120
Query: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSATPPE 180
GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDS
Sbjct: 121 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSGEAKS 180
Query: 181 T 181
T
Sbjct: 181 T 181
Score = 270 bits (691), Expect = 9e-73
Identities = 133/135 (98%), Positives = 134/135 (99%)
Query: 175 SATPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKE 234
+ TPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKE
Sbjct: 427 TTTPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKE 486
Query: 235 PTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEVSPAKEAIFILYYVREFVSRF 294
PTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEVSPAKEAIFILYYVREFVSRF
Sbjct: 487 PTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEVSPAKEAIFILYYVREFVSRF 546
Query: 295 PDCRKCKLETHICLR 309
PDCRKCKLETHICLR
Sbjct: 547 PDCRKCKLETHICLR 561
>gi|154350244 hypothetical protein LOC79632 isoform 2 [Homo sapiens]
Length = 971
Score = 39.3 bits (90), Expect = 0.004
Identities = 22/81 (27%), Positives = 41/81 (50%)
Query: 8 KKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDNNKMLVLA 67
K Q LE++K+ +++K N EIG + + Q + + L+ + QD+ + L
Sbjct: 407 KNQLQQELENLKEVLEDKLNTANQEIGHLQDMVRKSEQGLGSAEGLIASLQDSQERLQNE 466
Query: 68 LENEKSKVKEAQDIILQLRKE 88
L+ K +KE +D +L + E
Sbjct: 467 LDLTKDSLKETKDALLNVEGE 487
>gi|154350226 hypothetical protein LOC79632 isoform 1 [Homo sapiens]
Length = 1140
Score = 39.3 bits (90), Expect = 0.004
Identities = 22/81 (27%), Positives = 41/81 (50%)
Query: 8 KKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDNNKMLVLA 67
K Q LE++K+ +++K N EIG + + Q + + L+ + QD+ + L
Sbjct: 527 KNQLQQELENLKEVLEDKLNTANQEIGHLQDMVRKSEQGLGSAEGLIASLQDSQERLQNE 586
Query: 68 LENEKSKVKEAQDIILQLRKE 88
L+ K +KE +D +L + E
Sbjct: 587 LDLTKDSLKETKDALLNVEGE 607
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 34.3 bits (77), Expect = 0.14
Identities = 43/161 (26%), Positives = 61/161 (37%), Gaps = 20/161 (12%)
Query: 7 LKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQD--NNKML 64
LK +FQ + K K + ++ E GK + C I N L N D N +
Sbjct: 928 LKANFQLHCKTDKHMQKYQLVAHIKEGGKSNEW-RLKCIAIGNPVHLKCNACDYYTNSVD 986
Query: 65 VLALENEKSKVKEAQDIILQLRKE--------CYYLTCQL-YALKGKLTSQQTVEPAQNQ 115
L L + + A + L+K+ CYY Y K KL Q V ++Q
Sbjct: 987 KLRLHTTNHRHEAALKLYKHLQKQEGAVNPESCYYYCAVCDYTTKVKLNLVQHVRSVKHQ 1046
Query: 116 E--------ICSSGMDPNSDDSSRNLFVKDLPQIPLEETEL 148
+ + G+ P D+ S FVKD P LE L
Sbjct: 1047 QTEGLRKLQLHQQGLAPEEDNLSEIFFVKDCPPNELETASL 1087
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 33.9 bits (76), Expect = 0.19
Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 14/126 (11%)
Query: 6 CLKKSFQDSLEDIKKR---MKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN-- 60
CLK +D ++K+ ++ + A I + I I + + +LKNY
Sbjct: 1497 CLKGEMEDDKSKMEKKESNLETELKSQTARIMELEDHITQKTIEIESLNEVLKNYNQQKD 1556
Query: 61 --NKMLVLAL-------ENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEP 111
+K LV L E + ++VKEA++ IL L + Y + +L K +L
Sbjct: 1557 IEHKELVQKLQHFQELGEEKDNRVKEAEEKILTLENQVYSMKAELETKKKELEHVNLSVK 1616
Query: 112 AQNQEI 117
++ +E+
Sbjct: 1617 SKEEEL 1622
>gi|29826321 adducin 1 (alpha) isoform b [Homo sapiens]
Length = 768
Score = 33.5 bits (75), Expect = 0.25
Identities = 41/176 (23%), Positives = 76/176 (43%), Gaps = 14/176 (7%)
Query: 103 LTSQQTVEPAQNQEICSSGMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIP 162
LT ++ E + E G + N D++ + + P ++ +P S I+ +
Sbjct: 598 LTDRELEEYRREVERKQKGSEENLDEAR-----EQKEKSPPDQPAVPHPPPSTPIKLEED 652
Query: 163 TIPQDTLGVDFDSATPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALP 222
+P+ T G D D+AT T P LS + + +P+++ + P +P A P
Sbjct: 653 LVPEPTTGDDSDAATFKPT--LPDLSPDEPSEALGFPMLEKEEEAHRPPSPTEAPTEASP 710
Query: 223 KRRCTASVNYKE--PTLASKLRRGDPFTDLCFLNSPIFKQKK-----DLRRSKKRA 271
+ + +E P+ + DP +D SP K+KK L++SKK++
Sbjct: 711 EPAPDPAPVAEEAAPSAVEEGAAADPGSDGSPGKSPSKKKKKFRTPSFLKKSKKKS 766
>gi|29826319 adducin 1 (alpha) isoform a [Homo sapiens]
Length = 737
Score = 33.5 bits (75), Expect = 0.25
Identities = 41/176 (23%), Positives = 76/176 (43%), Gaps = 14/176 (7%)
Query: 103 LTSQQTVEPAQNQEICSSGMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIP 162
LT ++ E + E G + N D++ + + P ++ +P S I+ +
Sbjct: 567 LTDRELEEYRREVERKQKGSEENLDEAR-----EQKEKSPPDQPAVPHPPPSTPIKLEED 621
Query: 163 TIPQDTLGVDFDSATPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALP 222
+P+ T G D D+AT T P LS + + +P+++ + P +P A P
Sbjct: 622 LVPEPTTGDDSDAATFKPT--LPDLSPDEPSEALGFPMLEKEEEAHRPPSPTEAPTEASP 679
Query: 223 KRRCTASVNYKE--PTLASKLRRGDPFTDLCFLNSPIFKQKK-----DLRRSKKRA 271
+ + +E P+ + DP +D SP K+KK L++SKK++
Sbjct: 680 EPAPDPAPVAEEAAPSAVEEGAAADPGSDGSPGKSPSKKKKKFRTPSFLKKSKKKS 735
>gi|145699123 dedicator of cytokinesis 11 [Homo sapiens]
Length = 2073
Score = 33.5 bits (75), Expect = 0.25
Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 23/130 (17%)
Query: 14 SLEDIKKRMKE--KRNKNLAEIGKRRSFIAAPC------QIITNTSTLLKNYQDNNKMLV 65
S EDI K + E K K +I + I C IT++ LK ++ N + +
Sbjct: 560 SSEDILKLLSEYKKPEKTKLQIIPGQLNITVECVPVDLSNCITSSYVPLKPFEKNCQNIT 619
Query: 66 LALENEKSKVKEAQDIILQLRKECYYLTCQ-----LYALKGKLTSQQTVEPAQNQEICSS 120
+ E ++ + ++ K CY T +Y L+ K SQ+T A+N +C
Sbjct: 620 V----------EVEEFVPEMTKYCYPFTIYKNHLYVYPLQLKYDSQKTFAKARNIAVCVE 669
Query: 121 GMDPNSDDSS 130
D + D+S
Sbjct: 670 FRDSDESDAS 679
>gi|122891870 melanoma inhibitory activity family, member 3 [Homo
sapiens]
Length = 1907
Score = 33.1 bits (74), Expect = 0.32
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 13/85 (15%)
Query: 51 STLLKNYQDNNKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVE 110
S LK N LV L N + K+KE++ + + RK+ L+ + K K+ +T+E
Sbjct: 1217 SEKLKTIMKENTELVQKLSNYEQKIKESKKHVQETRKQNMILSDEAIKYKDKI---KTLE 1273
Query: 111 PAQNQEICSSGMDPNSDDSSRNLFV 135
+NQEI DD+++NL V
Sbjct: 1274 --KNQEIL--------DDTAKNLRV 1288
>gi|32698688 citron [Homo sapiens]
Length = 2027
Score = 32.7 bits (73), Expect = 0.42
Identities = 32/157 (20%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 7 LKKSFQD--SLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDNNKML 64
+KK D +LE++ +R +E+ ++ + ++++ I A I + + + NK+
Sbjct: 732 IKKDLADKETLENMMQRHEEEAHEKGKILSEQKAMINAMDSKIRSLEQRIVELSEANKLA 791
Query: 65 VLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSSGMDP 124
+ + +K +++I +LR++ +YL Q GKL +Q Q ++I
Sbjct: 792 ANSSLFTQRNMKAQEEMISELRQQKFYLETQ----AGKLEAQNRKLEEQLEKI------S 841
Query: 125 NSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQI 161
+ D S +N ++ + L E L + + +++ Q+
Sbjct: 842 HQDHSDKNRLLE--LETRLREVSLEHEEQKLELKRQL 876
Score = 30.0 bits (66), Expect = 2.7
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 32 EIGKRRSFIAAPCQIITNTSTLLKNYQDNNKMLV---LALENEKSKVKEAQDIILQLRKE 88
EI ++ + C +IT+ L ++N L L + + A D I+QLR E
Sbjct: 931 EIQRKFDALRNSCTVITDLEEQLNQLTEDNAELNNQNFYLSKQLDEASGANDEIVQLRSE 990
Query: 89 CYYLTCQLYALKGKLTSQ-QTVE 110
+L ++ + +LTSQ QT+E
Sbjct: 991 VDHLRREITEREMQLTSQKQTME 1013
>gi|21264345 peripherin [Homo sapiens]
Length = 470
Score = 32.7 bits (73), Expect = 0.42
Identities = 16/58 (27%), Positives = 31/58 (53%)
Query: 61 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEIC 118
N+ + NEK +++E D ++ +L Q AL+G+L+ + EPA+ ++C
Sbjct: 87 NQEFLATRSNEKQELQELNDRFANFIEKVRFLEQQNAALRGELSQARGQEPARADQLC 144
>gi|134133246 hypothetical protein LOC285753 [Homo sapiens]
Length = 460
Score = 32.3 bits (72), Expect = 0.55
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 19 KKRMKEKRN-KNLA--EIGKRRSFIAAPCQIITNTSTLLKNYQDNNKMLVLALENEKSKV 75
KK ++ + N +NLA E+ K++ I+ + TLL+ + K +VL +E EK+ +
Sbjct: 91 KKALENETNERNLAHQELIKQKKDISIQLSSAQSRCTLLEKQLEYTKRMVLNVEREKNMI 150
Query: 76 KEAQDIILQLRKECYYLTCQLYALKGKL 103
E Q QL++E +LYA KL
Sbjct: 151 LEQQ---AQLQREKEQDQMKLYAKLEKL 175
>gi|28603844 hypothetical protein LOC285753 [Homo sapiens]
Length = 460
Score = 32.3 bits (72), Expect = 0.55
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 19 KKRMKEKRN-KNLA--EIGKRRSFIAAPCQIITNTSTLLKNYQDNNKMLVLALENEKSKV 75
KK ++ + N +NLA E+ K++ I+ + TLL+ + K +VL +E EK+ +
Sbjct: 91 KKALENETNERNLAHQELIKQKKDISIQLSSAQSRCTLLEKQLEYTKRMVLNVEREKNMI 150
Query: 76 KEAQDIILQLRKECYYLTCQLYALKGKL 103
E Q QL++E +LYA KL
Sbjct: 151 LEQQ---AQLQREKEQDQMKLYAKLEKL 175
>gi|34878777 ring finger protein 20 [Homo sapiens]
Length = 975
Score = 32.0 bits (71), Expect = 0.71
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Query: 3 KERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDNNK 62
+ER +K + + +K+ KE+ + E GK +II LK Q++ K
Sbjct: 582 REREKEKEREREKQKLKESEKERDSAKDKEKGKHDDGRKKEAEIIKQLKIELKKAQESQK 641
Query: 63 MLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEI 117
+ L L+ +S KE +D + QL +L L+ +L + E +N+++
Sbjct: 642 EMKLLLDMYRSAPKEQRDKV-QLMAAEKKSKAELEDLRQRLKDLEDKEKKENKKM 695
>gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens]
Length = 1505
Score = 31.6 bits (70), Expect = 0.93
Identities = 38/127 (29%), Positives = 53/127 (41%), Gaps = 30/127 (23%)
Query: 100 KGKLTSQQTVEPAQNQEICSSGMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIED 159
K +L Q+T EPAQ SG NSDD+ R++ + ++ ++ L
Sbjct: 679 KRELQVQKTAEPAQPSSASGSG---NSDDAIRSILQQARREMEAQQAALD---------- 725
Query: 160 QIPTIPQDTLG-VDFDSATPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASP- 217
P + Q L D TP SP + VS YP L++S KK A+P
Sbjct: 726 --PALKQAPLSQSDITILTPKLLSTSP------MPTVSSYP-----PLAISLKKPSAAPE 772
Query: 218 --AVALP 222
A ALP
Sbjct: 773 AGASALP 779
>gi|16445033 ACRC protein [Homo sapiens]
Length = 691
Score = 31.6 bits (70), Expect = 0.93
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 9/117 (7%)
Query: 123 DPNSDDSSRNLFVKDL---PQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSATPP 179
D NSDD + +DL QI +E EL + D + LG + S P
Sbjct: 326 DDNSDDLEVPVPAEDLCNEGQIASDEEELVEAAAAVSQHDSSDDAGEQDLGENL-SKPPS 384
Query: 180 ETQQSPHLSLKDI-TNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEP 235
+ + +P +S + + T PVV+ +K+K V P++R T + N EP
Sbjct: 385 DPEANPEVSERKLPTEEEPAPVVE----QSGKRKSKTKTIVEPPRKRQTKTKNIVEP 437
>gi|110815815 centlein isoform 1 [Homo sapiens]
Length = 1406
Score = 31.6 bits (70), Expect = 0.93
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 23/115 (20%)
Query: 7 LKKSFQDSLEDIKK-----RMKEKRN----KNLAEIGKRRSFIAAPCQIITNTSTLLKNY 57
L+K F+D ++IK + KE++N KNL E K+ ++ C + N L+
Sbjct: 211 LEKKFKDKSQEIKDTKECVQNKEEQNRLVIKNLEEENKK---LSTRCTDLLNDLEKLRKQ 267
Query: 58 QDNNKMLVLALENEK----SKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQT 108
+ + L EK +K+K +D +++ RKE + AL +L+++QT
Sbjct: 268 EAH-------LRKEKYSTDAKIKTFEDNLIEARKEVEVSQSKYNALSLQLSNKQT 315
>gi|167555106 centlein isoform 2 [Homo sapiens]
Length = 391
Score = 31.6 bits (70), Expect = 0.93
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 23/115 (20%)
Query: 7 LKKSFQDSLEDIKK-----RMKEKRN----KNLAEIGKRRSFIAAPCQIITNTSTLLKNY 57
L+K F+D ++IK + KE++N KNL E K+ ++ C + N L+
Sbjct: 211 LEKKFKDKSQEIKDTKECVQNKEEQNRLVIKNLEEENKK---LSTRCTDLLNDLEKLRKQ 267
Query: 58 QDNNKMLVLALENEK----SKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQT 108
+ + L EK +K+K +D +++ RKE + AL +L+++QT
Sbjct: 268 EAH-------LRKEKYSTDAKIKTFEDNLIEARKEVEVSQSKYNALSLQLSNKQT 315
>gi|218082953 autophagy-related protein 13 isoform 1 [Homo sapiens]
Length = 517
Score = 31.2 bits (69), Expect = 1.2
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 95 QLYALKGKLTSQQTVEPAQNQEICSSGMDPNSDDSSRNLFVKDLPQIPLEET-----ELP 149
+ +ALK T Q V+ ++IC+ + NL +KD+P++ E +LP
Sbjct: 18 KFFALK---TVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPEVTHEAKKALAGQLP 74
Query: 150 GQGESFQIEDQIPTIPQDTLGVD 172
G S +E + T D++ ++
Sbjct: 75 AVGRSMCVEISLKTSEGDSMELE 97
>gi|41281462 autophagy-related protein 13 isoform 2 [Homo sapiens]
Length = 480
Score = 31.2 bits (69), Expect = 1.2
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 95 QLYALKGKLTSQQTVEPAQNQEICSSGMDPNSDDSSRNLFVKDLPQIPLEET-----ELP 149
+ +ALK T Q V+ ++IC+ + NL +KD+P++ E +LP
Sbjct: 18 KFFALK---TVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPEVTHEAKKALAGQLP 74
Query: 150 GQGESFQIEDQIPTIPQDTLGVD 172
G S +E + T D++ ++
Sbjct: 75 AVGRSMCVEISLKTSEGDSMELE 97
>gi|42794779 myosin 18A isoform b [Homo sapiens]
Length = 2039
Score = 30.8 bits (68), Expect = 1.6
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 6/115 (5%)
Query: 58 QDNNKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQ--TVEPAQNQ 115
Q N + L L + ++ +E+Q + QL+K+C LT +L K L QQ E + Q
Sbjct: 1401 QQNKRQLERRLGDLQADSEESQRALQQLKKKCQRLTAELQDTKLHLEGQQVRNHELEKKQ 1460
Query: 116 EICSSGMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLG 170
S + +++ R + L + L+ + E+F ++ Q+ D G
Sbjct: 1461 RRFDSELSQAHEEAQR----EKLQREKLQREKDMLLAEAFSLKQQLEEKDMDIAG 1511
>gi|28416946 myosin 18A isoform a [Homo sapiens]
Length = 2054
Score = 30.8 bits (68), Expect = 1.6
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 6/115 (5%)
Query: 58 QDNNKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQ--TVEPAQNQ 115
Q N + L L + ++ +E+Q + QL+K+C LT +L K L QQ E + Q
Sbjct: 1401 QQNKRQLERRLGDLQADSEESQRALQQLKKKCQRLTAELQDTKLHLEGQQVRNHELEKKQ 1460
Query: 116 EICSSGMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLG 170
S + +++ R + L + L+ + E+F ++ Q+ D G
Sbjct: 1461 RRFDSELSQAHEEAQR----EKLQREKLQREKDMLLAEAFSLKQQLEEKDMDIAG 1511
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 30.4 bits (67), Expect = 2.1
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 115 QEICSSGMDPNSDDSSRNLFVKDLPQI--PLEETELPGQGESFQIEDQIPTIPQ 166
Q C + D D S L VK+ P+ LE +++ QGES Q+E +I P+
Sbjct: 6340 QYTCQATNDVGKDMCSAQLSVKEPPKFVKKLEASKVAKQGESIQLECKISGSPE 6393
>gi|4505579 furin preproprotein [Homo sapiens]
Length = 794
Score = 30.4 bits (67), Expect = 2.1
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 81 IILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSSGMDPNSDDSSRNLFVKD 137
++LQLR + ++Y + L S + + P QE C S + + R F+KD
Sbjct: 734 LVLQLRSGFSFRGVKVYTMDRGLISYKGLPPEAWQEECPSDSEEDEGRGERTAFIKD 790
>gi|9506603 spermatogenesis associated 6 [Homo sapiens]
Length = 488
Score = 30.4 bits (67), Expect = 2.1
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 205 RLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPFT 248
R S S KK SP + + C + NY++PT++SK P+T
Sbjct: 182 RTSRSQKKKSKSPERS---KYCINAKNYEQPTISSKSHSPSPYT 222
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.132 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,934,227
Number of Sequences: 37866
Number of extensions: 553544
Number of successful extensions: 1966
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 1922
Number of HSP's gapped (non-prelim): 81
length of query: 309
length of database: 18,247,518
effective HSP length: 102
effective length of query: 207
effective length of database: 14,385,186
effective search space: 2977733502
effective search space used: 2977733502
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.