Guide to the Human Genome
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Name: ADD1 Sequence: fasta or formatted (737aa) NCBI GI: 29826319
Description:

adducin 1 (alpha) isoform a

Referenced in:

Cytoskeleton

Other entries for this name:
alt prot [768aa] adducin 1 (alpha) isoform b
alt prot [631aa] adducin 1 (alpha) isoform c
alt prot [662aa] adducin 1 (alpha) isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         57           3
 C cysteine            0.9          7           1
 D aspartate           5.0         37           2
 E glutamate           9.0         66           3
 F phenylalanine       2.7         20           1
 G glycine             6.6         49           2
 H histidine           2.0         15           1
 I isoleucine          3.3         24           2
 K lysine              7.1         52           5
 L leucine             8.1         60           2
 M methionine          2.2         16           2
 N asparagine          4.1         30           2
 P proline             8.8         65           3
 Q glutamine           4.1         30           2
 R arginine            4.7         35           2
 S serine              8.4         62           2
 T threonine           5.3         39           2
 V valine              6.5         48           2
 W tryptophan          0.5          4           1
 Y tyrosine            2.8         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   adducin 1 (alpha) isoform a 
ADD1                  0.989   adducin 1 (alpha) isoform b 
ADD1                  0.838   adducin 1 (alpha) isoform c 
ADD1                  0.827   adducin 1 (alpha) isoform d 
ADD3                  0.459   adducin 3 (gamma) isoform a 
ADD3                  0.444   adducin 3 (gamma) isoform b 
ADD3                  0.444   adducin 3 (gamma) isoform b 
ADD2                  0.417   adducin 2 isoform a 
ADD2                  0.387   adducin 2 isoform e 
ADD2                  0.364   adducin 2 isoform b 
ADD2                  0.126   adducin 2 isoform d 
ADD2                  0.126   adducin 2 isoform c 
NEFH                  0.023   neurofilament, heavy polypeptide 200kDa 
BASP1                 0.020   brain abundant, membrane attached signal protein 1 [...
POLR2A                0.018   DNA-directed RNA polymerase II A 
TTN                   0.018   titin isoform novex-2 
TTN                   0.018   titin isoform novex-1 
TTN                   0.018   titin isoform N2-B 
SRRM2                 0.017   splicing coactivator subunit SRm300 
NCOR2                 0.017   nuclear receptor co-repressor 2 isoform 2 
NCOR2                 0.017   nuclear receptor co-repressor 2 isoform 1 
DGKK                  0.017   diacylglycerol kinase kappa 
PELP1                 0.016   proline, glutamic acid and leucine rich protein 1 [...
KIAA1522              0.015   hypothetical protein LOC57648 
TTN                   0.015   titin isoform N2-A 
PRG4                  0.015   proteoglycan 4 isoform D 
PRG4                  0.015   proteoglycan 4 isoform C 
PRG4                  0.015   proteoglycan 4 isoform B 
PRG4                  0.015   proteoglycan 4 isoform A 
PRR12                 0.015   proline rich 12 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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