Guide to the Human Genome
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Name: KIAA0652 Sequence: fasta or formatted (517aa) NCBI GI: 218082953
Description:

autophagy-related protein 13 isoform 1

Referenced in:

Additional Membrane Functions

Other entries for this name:
alt prot [480aa] autophagy-related protein 13 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         33           2
 C cysteine            1.7          9           1
 D aspartate           6.2         32           2
 E glutamate           6.6         34           1
 F phenylalanine       4.3         22           2
 G glycine             6.2         32           2
 H histidine           2.3         12           1
 I isoleucine          4.8         25           3
 K lysine              4.3         22           2
 L leucine             8.7         45           3
 M methionine          2.5         13           1
 N asparagine          3.1         16           1
 P proline             7.2         37           2
 Q glutamine           4.1         21           1
 R arginine            4.3         22           1
 S serine             10.4         54           4
 T threonine           7.2         37           2
 V valine              7.0         36           2
 W tryptophan          0.4          2           1
 Y tyrosine            2.5         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   autophagy-related protein 13 isoform 1 
KIAA0652              0.910   autophagy-related protein 13 isoform 2 
ZFHX2                 0.012   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.012   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.012   PREDICTED: zinc finger homeobox 2 
PRPF40A               0.011   formin binding protein 3 
MUC17                 0.010   mucin 17 
ZNF692                0.008   zinc finger protein 692 isoform 2 
ZNF692                0.008   zinc finger protein 692 isoform 1 
SOX11                 0.008   SRY-box 11 
SERPING1              0.007   serpin peptidase inhibitor, clade G, member 1 precur...
SERPING1              0.007   serpin peptidase inhibitor, clade G, member 1 precur...
ZNF726                0.007   PREDICTED: zinc finger protein 726 
MTMR14                0.007   jumpy isoform 2 
LOC729792             0.007   PREDICTED: hypothetical protein 
LOC729792             0.007   PREDICTED: hypothetical protein 
LOC729792             0.007   PREDICTED: hypothetical protein 
LOC100294501          0.007   PREDICTED: hypothetical protein 
LOC100294249          0.007   PREDICTED: hypothetical protein XP_002344067 
LOC100294136          0.007   PREDICTED: hypothetical protein 
LOC100294091          0.007   PREDICTED: hypothetical protein 
LOC730401             0.007   PREDICTED: hypothetical protein 
C1orf127              0.007   hypothetical protein LOC148345 
GORASP1               0.007   Golgi reassembly stacking protein 1 
RBBP5                 0.007   retinoblastoma binding protein 5 
LOC100294335          0.006   PREDICTED: similar to c114 SLIT-like testicular pro...
LOC100294335          0.006   PREDICTED: similar to c114 SLIT-like testicular pro...
SGOL1                 0.006   shugoshin-like 1 isoform B1 
SGOL1                 0.006   shugoshin-like 1 isoform A1 
SGOL1                 0.006   shugoshin-like 1 isoform B2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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