Guide to the Human Genome
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Name: MIA3 Sequence: fasta or formatted (1907aa) NCBI GI: 122891870
Description:

melanoma inhibitory activity family, member 3

Referenced in:

T cells

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1        116           3
 C cysteine            0.6         12           1
 D aspartate           7.1        135           4
 E glutamate          12.0        229           3
 F phenylalanine       2.9         56           2
 G glycine             5.6        107           2
 H histidine           2.1         41           2
 I isoleucine          3.1         60           2
 K lysine              7.8        148           4
 L leucine             8.8        167           2
 M methionine          2.4         46           2
 N asparagine          4.6         87           2
 P proline             7.0        133           4
 Q glutamine           5.3        101           2
 R arginine            4.2         80           2
 S serine              7.7        146           4
 T threonine           5.2         99           2
 V valine              5.2         99           2
 W tryptophan          0.6         12           1
 Y tyrosine            1.7         33           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   melanoma inhibitory activity family, member 3 [Homo... 
CTAGE5                0.068   CTAGE family, member 5 isoform 3 
CTAGE5                0.066   CTAGE family, member 5 isoform 1 
CTAGE5                0.066   CTAGE family, member 5 isoform 2 
CTAGE5                0.063   CTAGE family, member 5 isoform 4 
CTAGE6                0.057   CTAGE family, member 6 
LOC441294             0.057   hypothetical protein LOC441294 
CTAGE4                0.056   CTAGE family, member 4 
LOC643854             0.056   hypothetical protein LOC643854 
CTAGE1                0.053   cutaneous T-cell lymphoma-associated antigen 1 isofo...
SPZ1                  0.031   spermatogenic leucine zipper 1 
MIA2                  0.023   melanoma inhibitory activity 2 
MYH13                 0.018   myosin, heavy polypeptide 13, skeletal muscle [Homo...
DIAPH1                0.017   diaphanous 1 isoform 2 
DIAPH1                0.017   diaphanous 1 isoform 1 
MYH3                  0.017   myosin, heavy chain 3, skeletal muscle, embryonic [H...
MYH8                  0.017   myosin, heavy chain 8, skeletal muscle, perinatal [...
OTOR                  0.017   otoraplin precursor 
MYH7                  0.017   myosin, heavy chain 7, cardiac muscle, beta 
MYH10                 0.016   myosin, heavy polypeptide 10, non-muscle 
CENPF                 0.016   centromere protein F 
MYH4                  0.016   myosin, heavy polypeptide 4, skeletal muscle 
MYH11                 0.016   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.016   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.016   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.016   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
HOOK3                 0.016   golgi-associated microtubule-binding protein HOOK3 [...
CCDC88C               0.016   DVL-binding protein DAPLE 
MYH15                 0.016   myosin, heavy polypeptide 15 
LOC727832             0.015   golgi autoantigen, golgin subfamily a-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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