Guide to the Human Genome
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Name: KIAA0652 Sequence: fasta or formatted (480aa) NCBI GI: 41281462
Description:

autophagy-related protein 13 isoform 2

Referenced in:

Additional Membrane Functions

Other entries for this name:
alt prot [517aa] autophagy-related protein 13 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         26           2
 C cysteine            1.9          9           1
 D aspartate           6.5         31           2
 E glutamate           7.1         34           1
 F phenylalanine       4.4         21           2
 G glycine             6.0         29           2
 H histidine           2.1         10           1
 I isoleucine          5.2         25           3
 K lysine              4.6         22           2
 L leucine             8.3         40           3
 M methionine          2.7         13           1
 N asparagine          3.1         15           1
 P proline             7.1         34           2
 Q glutamine           4.0         19           1
 R arginine            4.4         21           1
 S serine             10.2         49           4
 T threonine           7.5         36           2
 V valine              6.9         33           1
 W tryptophan          0.4          2           1
 Y tyrosine            2.3         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   autophagy-related protein 13 isoform 2 
KIAA0652              0.980   autophagy-related protein 13 isoform 1 
ZFHX2                 0.013   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.013   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.013   PREDICTED: zinc finger homeobox 2 
MUC5B                 0.009   mucin 5, subtype B, tracheobronchial 
SOX11                 0.009   SRY-box 11 
KIAA1549              0.009   hypothetical protein LOC57670 
SERPING1              0.007   serpin peptidase inhibitor, clade G, member 1 precur...
SERPING1              0.007   serpin peptidase inhibitor, clade G, member 1 precur...
MTMR14                0.007   jumpy isoform 2 
C22orf29              0.007   hypothetical protein LOC79680 
NACA                  0.007   nascent polypeptide-associated complex alpha subuni...
FEZF1                 0.007   FEZ family zinc finger 1 isoform 2 
FEZF1                 0.007   FEZ family zinc finger 1 isoform 1 
RBBP5                 0.007   retinoblastoma binding protein 5 
LOC647546             0.006   PREDICTED: hypothetical protein 
AFF1                  0.006   myeloid/lymphoid or mixed-lineage leukemia trithorax ...
C1orf127              0.006   hypothetical protein LOC148345 
SGOL1                 0.006   shugoshin-like 1 isoform B1 
SGOL1                 0.006   shugoshin-like 1 isoform A1 
SGOL1                 0.006   shugoshin-like 1 isoform B2 
SGOL1                 0.006   shugoshin-like 1 isoform A2 
GORASP1               0.006   Golgi reassembly stacking protein 1 
YEATS2                0.006   YEATS domain containing 2 
MUC5AC                0.005   mucin 5AC 
RFC1                  0.005   replication factor C large subunit 
TSG101                0.005   tumor susceptibility gene 101 
SYNE2                 0.005   spectrin repeat containing, nuclear envelope 2 isof...
SYNE2                 0.005   spectrin repeat containing, nuclear envelope 2 isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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