Guide to the Human Genome
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Name: ADD1 Sequence: fasta or formatted (768aa) NCBI GI: 29826321
Description:

adducin 1 (alpha) isoform b

Referenced in:

Cytoskeleton

Other entries for this name:
alt prot [737aa] adducin 1 (alpha) isoform a
alt prot [631aa] adducin 1 (alpha) isoform c
alt prot [662aa] adducin 1 (alpha) isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         57           3
 C cysteine            1.3         10           1
 D aspartate           4.9         38           2
 E glutamate           8.6         66           3
 F phenylalanine       2.6         20           1
 G glycine             6.5         50           2
 H histidine           2.2         17           1
 I isoleucine          3.4         26           2
 K lysine              6.9         53           5
 L leucine             8.3         64           2
 M methionine          2.1         16           2
 N asparagine          4.2         32           2
 P proline             8.7         67           3
 Q glutamine           4.0         31           2
 R arginine            4.6         35           2
 S serine              8.6         66           2
 T threonine           5.5         42           2
 V valine              6.8         52           2
 W tryptophan          0.7          5           1
 Y tyrosine            2.7         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   adducin 1 (alpha) isoform b 
ADD1                  0.946   adducin 1 (alpha) isoform a 
ADD1                  0.845   adducin 1 (alpha) isoform d 
ADD1                  0.791   adducin 1 (alpha) isoform c 
ADD3                  0.429   adducin 3 (gamma) isoform a 
ADD3                  0.414   adducin 3 (gamma) isoform b 
ADD3                  0.414   adducin 3 (gamma) isoform b 
ADD2                  0.388   adducin 2 isoform a 
ADD2                  0.359   adducin 2 isoform e 
ADD2                  0.338   adducin 2 isoform b 
ADD2                  0.120   adducin 2 isoform d 
ADD2                  0.120   adducin 2 isoform c 
NEFH                  0.022   neurofilament, heavy polypeptide 200kDa 
BASP1                 0.019   brain abundant, membrane attached signal protein 1 [...
POLR2A                0.017   DNA-directed RNA polymerase II A 
TTN                   0.017   titin isoform novex-2 
TTN                   0.017   titin isoform novex-1 
TTN                   0.017   titin isoform N2-B 
NCOR2                 0.016   nuclear receptor co-repressor 2 isoform 2 
NCOR2                 0.016   nuclear receptor co-repressor 2 isoform 1 
DGKK                  0.016   diacylglycerol kinase kappa 
SRRM2                 0.016   splicing coactivator subunit SRm300 
PALM2-AKAP2           0.016   PALM2-AKAP2 protein isoform 2 
PALM2-AKAP2           0.016   PALM2-AKAP2 protein isoform 1 
AKAP2                 0.016   A kinase (PRKA) anchor protein 2 isoform 2 
AKAP2                 0.016   A kinase (PRKA) anchor protein 2 isoform 1 
PELP1                 0.015   proline, glutamic acid and leucine rich protein 1 [...
KIAA1522              0.014   hypothetical protein LOC57648 
TTN                   0.014   titin isoform N2-A 
PRG4                  0.014   proteoglycan 4 isoform D 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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