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Search of human proteins with 58219040
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|58219040 golgi autoantigen, golgin subfamily a, 7B [Homo
sapiens]
(167 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|58219040 golgi autoantigen, golgin subfamily a, 7B [Homo sapi... 333 4e-92
gi|50541946 golgi autoantigen, golgin subfamily a, 7 [Homo sapiens] 214 2e-56
gi|50541950 golgi autoantigen, golgin subfamily a, 7 [Homo sapiens] 214 2e-56
gi|21327710 nucleosome assembly protein 1-like 3 [Homo sapiens] 35 0.030
gi|150378478 PR domain containing 8 [Homo sapiens] 35 0.039
gi|150378439 PR domain containing 8 [Homo sapiens] 35 0.039
gi|238859557 regulatory factor X1 [Homo sapiens] 34 0.051
gi|119395716 forkhead box C1 [Homo sapiens] 34 0.051
gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens] 33 0.087
gi|188497630 hypothetical protein LOC55571 [Homo sapiens] 33 0.087
gi|6912752 zinc finger protein 281 [Homo sapiens] 33 0.087
gi|195972866 keratin 10 [Homo sapiens] 33 0.11
gi|55956899 keratin 9 [Homo sapiens] 33 0.15
gi|140561024 CASK-interacting protein CIP98 isoform 1 [Homo sapi... 33 0.15
gi|186928829 dermokine isoform 4 precursor [Homo sapiens] 33 0.15
gi|186928827 dermokine isoform 5 precursor [Homo sapiens] 33 0.15
gi|186928825 dermokine isoform 3 precursor [Homo sapiens] 33 0.15
gi|33504489 dermokine isoform 2 precursor [Homo sapiens] 33 0.15
gi|169881239 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked ... 33 0.15
gi|13514809 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [... 33 0.15
gi|84993742 tripartite motif-containing 71 [Homo sapiens] 33 0.15
gi|149363700 syntaxin binding protein 5-like [Homo sapiens] 33 0.15
gi|119395750 keratin 1 [Homo sapiens] 32 0.19
gi|154091020 leucine-rich repeats and calponin homology (CH) dom... 32 0.19
gi|47132620 keratin 2 [Homo sapiens] 32 0.19
gi|46358366 zinc finger protein 746 [Homo sapiens] 32 0.19
gi|55956910 meningioma 1 [Homo sapiens] 32 0.25
gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens] 32 0.25
gi|59709427 XK, Kell blood group complex subunit-related family,... 32 0.25
gi|110347455 Brn3b POU domain transcription factor [Homo sapiens] 32 0.25
>gi|58219040 golgi autoantigen, golgin subfamily a, 7B [Homo
sapiens]
Length = 167
Score = 333 bits (854), Expect = 4e-92
Identities = 167/167 (100%), Positives = 167/167 (100%)
Query: 1 MATEVHNLQELRRSASLATKVFIQRDYSDGTICQFQTKFPPELDSRIERQLFEETVKTLN 60
MATEVHNLQELRRSASLATKVFIQRDYSDGTICQFQTKFPPELDSRIERQLFEETVKTLN
Sbjct: 1 MATEVHNLQELRRSASLATKVFIQRDYSDGTICQFQTKFPPELDSRIERQLFEETVKTLN 60
Query: 61 GFYAEAEKIGGSSYLEGCLACATAYFIFLCMETHYEKVLKKISRYIQEQNEKIFAPRGLL 120
GFYAEAEKIGGSSYLEGCLACATAYFIFLCMETHYEKVLKKISRYIQEQNEKIFAPRGLL
Sbjct: 61 GFYAEAEKIGGSSYLEGCLACATAYFIFLCMETHYEKVLKKISRYIQEQNEKIFAPRGLL 120
Query: 121 LTDPVERGMRVIEISIYEDRCSSGSSSSGSSSGSGSSSGGGGGAGAR 167
LTDPVERGMRVIEISIYEDRCSSGSSSSGSSSGSGSSSGGGGGAGAR
Sbjct: 121 LTDPVERGMRVIEISIYEDRCSSGSSSSGSSSGSGSSSGGGGGAGAR 167
>gi|50541946 golgi autoantigen, golgin subfamily a, 7 [Homo sapiens]
Length = 137
Score = 214 bits (546), Expect = 2e-56
Identities = 104/133 (78%), Positives = 119/133 (89%), Gaps = 1/133 (0%)
Query: 13 RSASLATKVFIQRDYSDGTICQFQTKFPPELDSRIERQLFEETVKTLNGFYAEAEKIGGS 72
+ A ++ KVFIQRDYS GT CQFQTKFP EL++RI+RQ FEETV+TLN YAEAEK+GG
Sbjct: 4 QQAPVSGKVFIQRDYSSGTRCQFQTKFPAELENRIDRQQFEETVRTLNNLYAEAEKLGGQ 63
Query: 73 SYLEGCLACATAYFIFLCMETHYEKVLKKISRYIQEQNEKIFAPRGLLLTDPVERGMRVI 132
SYLEGCLAC TAY IFLCMETHYEKVLKK+S+YIQEQNEKI+AP+GLLLTDP+ERG+RVI
Sbjct: 64 SYLEGCLACLTAYTIFLCMETHYEKVLKKVSKYIQEQNEKIYAPQGLLLTDPIERGLRVI 123
Query: 133 EISIYEDR-CSSG 144
EI+IYEDR SSG
Sbjct: 124 EITIYEDRGMSSG 136
>gi|50541950 golgi autoantigen, golgin subfamily a, 7 [Homo sapiens]
Length = 137
Score = 214 bits (546), Expect = 2e-56
Identities = 104/133 (78%), Positives = 119/133 (89%), Gaps = 1/133 (0%)
Query: 13 RSASLATKVFIQRDYSDGTICQFQTKFPPELDSRIERQLFEETVKTLNGFYAEAEKIGGS 72
+ A ++ KVFIQRDYS GT CQFQTKFP EL++RI+RQ FEETV+TLN YAEAEK+GG
Sbjct: 4 QQAPVSGKVFIQRDYSSGTRCQFQTKFPAELENRIDRQQFEETVRTLNNLYAEAEKLGGQ 63
Query: 73 SYLEGCLACATAYFIFLCMETHYEKVLKKISRYIQEQNEKIFAPRGLLLTDPVERGMRVI 132
SYLEGCLAC TAY IFLCMETHYEKVLKK+S+YIQEQNEKI+AP+GLLLTDP+ERG+RVI
Sbjct: 64 SYLEGCLACLTAYTIFLCMETHYEKVLKKVSKYIQEQNEKIYAPQGLLLTDPIERGLRVI 123
Query: 133 EISIYEDR-CSSG 144
EI+IYEDR SSG
Sbjct: 124 EITIYEDRGMSSG 136
>gi|21327710 nucleosome assembly protein 1-like 3 [Homo sapiens]
Length = 506
Score = 35.0 bits (79), Expect = 0.030
Identities = 17/26 (65%), Positives = 19/26 (73%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGGAGAR 167
SS SS+SGSSSGSGSSS G +R
Sbjct: 46 SSSSSTSGSSSGSGSSSSSSGSTSSR 71
Score = 30.8 bits (68), Expect = 0.56
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 120 LLTDPVERGMRVIEI------SIYEDRCSSGSSSSGSSSGSGSSSGGGGGAGA 166
++++PV G+ E+ S E SS SSS+ SS S S+SG G+G+
Sbjct: 8 MVSEPVAHGVAEEEMASSTSDSGEESDSSSSSSSTSDSSSSSSTSGSSSGSGS 60
Score = 29.3 bits (64), Expect = 1.6
Identities = 15/25 (60%), Positives = 17/25 (68%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGGAGA 166
SS S SS SSS SGSSSG G + +
Sbjct: 40 SSTSDSSSSSSTSGSSSGSGSSSSS 64
>gi|150378478 PR domain containing 8 [Homo sapiens]
Length = 689
Score = 34.7 bits (78), Expect = 0.039
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 111 EKIFAPR-GLLLTDPVERGM--RVIEISIYEDRCSSGSSSSGSSSGSGSSSGGGGGAGA 166
EK+ APR G L +E G R + S+GS+S G +G+G++ G GGG GA
Sbjct: 434 EKLLAPRPGGPLPSRLEGGSPARGSAFTSVPQLGSAGSTSGGGGTGAGAAGGAGGGQGA 492
Score = 26.9 bits (58), Expect = 8.1
Identities = 13/26 (50%), Positives = 14/26 (53%)
Query: 138 EDRCSSGSSSSGSSSGSGSSSGGGGG 163
E+ S S S SGS SGGGGG
Sbjct: 269 ENSRGGSSCSPAQSLSSGSGSGGGGG 294
>gi|150378439 PR domain containing 8 [Homo sapiens]
Length = 689
Score = 34.7 bits (78), Expect = 0.039
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 111 EKIFAPR-GLLLTDPVERGM--RVIEISIYEDRCSSGSSSSGSSSGSGSSSGGGGGAGA 166
EK+ APR G L +E G R + S+GS+S G +G+G++ G GGG GA
Sbjct: 434 EKLLAPRPGGPLPSRLEGGSPARGSAFTSVPQLGSAGSTSGGGGTGAGAAGGAGGGQGA 492
Score = 26.9 bits (58), Expect = 8.1
Identities = 13/26 (50%), Positives = 14/26 (53%)
Query: 138 EDRCSSGSSSSGSSSGSGSSSGGGGG 163
E+ S S S SGS SGGGGG
Sbjct: 269 ENSRGGSSCSPAQSLSSGSGSGGGGG 294
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 34.3 bits (77), Expect = 0.051
Identities = 16/39 (41%), Positives = 20/39 (51%)
Query: 128 GMRVIEISIYEDRCSSGSSSSGSSSGSGSSSGGGGGAGA 166
G +V+ S +S SS G S G G GGGGG G+
Sbjct: 362 GSQVVASSTSTGAGASNSSGGGGSGGGGGGGGGGGGGGS 400
Score = 30.4 bits (67), Expect = 0.74
Identities = 12/22 (54%), Positives = 13/22 (59%)
Query: 144 GSSSSGSSSGSGSSSGGGGGAG 165
G G GSGS+ GGG GAG
Sbjct: 390 GGGGGGGGGGSGSTGGGGSGAG 411
Score = 29.6 bits (65), Expect = 1.3
Identities = 12/23 (52%), Positives = 13/23 (56%)
Query: 144 GSSSSGSSSGSGSSSGGGGGAGA 166
G G G GS S GGGG+GA
Sbjct: 388 GGGGGGGGGGGGSGSTGGGGSGA 410
>gi|119395716 forkhead box C1 [Homo sapiens]
Length = 553
Score = 34.3 bits (77), Expect = 0.051
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 135 SIYEDRCSSGSSSSGSSSGSGSSSGGGGGAG 165
S+Y CS +SS+GSS G G +G GGAG
Sbjct: 359 SLYSSPCSQ-TSSAGSSGGGGGGAGAAGGAG 388
Score = 26.9 bits (58), Expect = 8.1
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 132 IEISIYEDRCSSGSSSSGSSSGSGSSS-GGGGGAGA 166
+ + Y SS SS S + S SS GGGGGAGA
Sbjct: 348 LALGAYSPGQSSLYSSPCSQTSSAGSSGGGGGGAGA 383
>gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]
Length = 532
Score = 33.5 bits (75), Expect = 0.087
Identities = 14/21 (66%), Positives = 15/21 (71%)
Query: 143 SGSSSSGSSSGSGSSSGGGGG 163
SGS +G SG GS SGGGGG
Sbjct: 480 SGSGGAGGGSGGGSGSGGGGG 500
Score = 32.0 bits (71), Expect = 0.25
Identities = 13/22 (59%), Positives = 14/22 (63%)
Query: 144 GSSSSGSSSGSGSSSGGGGGAG 165
GS S G+ GSG SG GGG G
Sbjct: 479 GSGSGGAGGGSGGGSGSGGGGG 500
Score = 32.0 bits (71), Expect = 0.25
Identities = 13/23 (56%), Positives = 14/23 (60%)
Query: 143 SGSSSSGSSSGSGSSSGGGGGAG 165
SG + GS GSGS GGGG G
Sbjct: 482 SGGAGGGSGGGSGSGGGGGGAGG 504
Score = 30.8 bits (68), Expect = 0.56
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGGAGA 166
+ G S GS SG G GGGG G+
Sbjct: 485 AGGGSGGGSGSGGGGGGAGGGGGGS 509
Score = 28.1 bits (61), Expect = 3.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 143 SGSSSSGSSSGSGSSSGGGGG 163
SG G+ G G SSGGG G
Sbjct: 495 SGGGGGGAGGGGGGSSGGGSG 515
Score = 26.9 bits (58), Expect = 8.1
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 144 GSSSSGSSSGSGSSSGGGGGAGA 166
GS S G G +GGGGG +
Sbjct: 488 GSGGGSGSGGGGGGAGGGGGGSS 510
Score = 26.9 bits (58), Expect = 8.1
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 143 SGSSSSGSSSGSGSSSGGGGGAG 165
SG S G G+ GGGG +G
Sbjct: 489 SGGGSGSGGGGGGAGGGGGGSSG 511
Score = 26.9 bits (58), Expect = 8.1
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 144 GSSSSGSSSGSGSSSGGGGGAGA 166
GS S G G+G GG G G+
Sbjct: 492 GSGSGGGGGGAGGGGGGSSGGGS 514
Score = 26.9 bits (58), Expect = 8.1
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 143 SGSSSSGSSSGSGSSSGGGGGAG 165
SGS G +G G GGG+G
Sbjct: 493 SGSGGGGGGAGGGGGGSSGGGSG 515
>gi|188497630 hypothetical protein LOC55571 [Homo sapiens]
Length = 510
Score = 33.5 bits (75), Expect = 0.087
Identities = 20/53 (37%), Positives = 22/53 (41%)
Query: 115 APRGLLLTDPVERGMRVIEISIYEDRCSSGSSSSGSSSGSGSSSGGGGGAGAR 167
A G LLT +RG R S G +SG GS SGG GG R
Sbjct: 8 AASGRLLTAAEQRGSREAAGSASRSGFGGSGGGRGGASGPGSGSGGPGGPAGR 60
>gi|6912752 zinc finger protein 281 [Homo sapiens]
Length = 895
Score = 33.5 bits (75), Expect = 0.087
Identities = 14/23 (60%), Positives = 15/23 (65%)
Query: 143 SGSSSSGSSSGSGSSSGGGGGAG 165
SG +GSS GSGS GG GG G
Sbjct: 9 SGGGGTGSSGGSGSGGGGSGGGG 31
Score = 32.3 bits (72), Expect = 0.19
Identities = 13/23 (56%), Positives = 15/23 (65%)
Query: 144 GSSSSGSSSGSGSSSGGGGGAGA 166
G+ SSG S G SGGGGG G+
Sbjct: 13 GTGSSGGSGSGGGGSGGGGGGGS 35
Score = 32.0 bits (71), Expect = 0.25
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 143 SGSSSSGSSSGSGSSSGGGGGAGAR 167
+GSS S G GS GGGGG+ R
Sbjct: 14 TGSSGGSGSGGGGSGGGGGGGSSGR 38
>gi|195972866 keratin 10 [Homo sapiens]
Length = 584
Score = 33.1 bits (74), Expect = 0.11
Identities = 15/25 (60%), Positives = 17/25 (68%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGGAGA 166
SSG SSG G GSSSGG GG+ +
Sbjct: 503 SSGGGSSGGGYGGGSSSGGHGGSSS 527
Score = 31.6 bits (70), Expect = 0.33
Identities = 14/23 (60%), Positives = 15/23 (65%)
Query: 144 GSSSSGSSSGSGSSSGGGGGAGA 166
G G SSG GSSSGGG G G+
Sbjct: 539 GGGYGGGSSGGGSSSGGGYGGGS 561
Score = 30.8 bits (68), Expect = 0.56
Identities = 14/25 (56%), Positives = 15/25 (60%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGGAGA 166
SSG G SSG GSS GG GG +
Sbjct: 494 SSGGGYGGGSSGGGSSGGGYGGGSS 518
Score = 30.0 bits (66), Expect = 0.96
Identities = 13/23 (56%), Positives = 14/23 (60%)
Query: 144 GSSSSGSSSGSGSSSGGGGGAGA 166
GSS G G G SSGGG G G+
Sbjct: 481 GSSGGGHGGGHGGSSGGGYGGGS 503
Score = 30.0 bits (66), Expect = 0.96
Identities = 14/29 (48%), Positives = 14/29 (48%)
Query: 137 YEDRCSSGSSSSGSSSGSGSSSGGGGGAG 165
Y SSG SS G G S GGGG G
Sbjct: 513 YGGGSSSGGHGGSSSGGYGGGSSGGGGGG 541
Score = 28.9 bits (63), Expect = 2.1
Identities = 15/22 (68%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
Query: 144 GSSSSGSSSGSGSSSGGGGGAG 165
GSSS G G GSS GGGGG G
Sbjct: 524 GSSSGG--YGGGSSGGGGGGYG 543
Score = 28.9 bits (63), Expect = 2.1
Identities = 14/24 (58%), Positives = 14/24 (58%)
Query: 137 YEDRCSSGSSSSGSSSGSGSSSGG 160
Y S G SSSG G GSSSGG
Sbjct: 542 YGGGSSGGGSSSGGGYGGGSSSGG 565
Score = 28.5 bits (62), Expect = 2.8
Identities = 16/26 (61%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Query: 142 SSGSSSSGSSSGS--GSSSGGGGGAG 165
S GS S GSS G G SSGG GG G
Sbjct: 53 SGGSFSRGSSGGGCFGGSSGGYGGLG 78
Score = 28.5 bits (62), Expect = 2.8
Identities = 13/22 (59%), Positives = 13/22 (59%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGG 163
S G G SSG GSS GG GG
Sbjct: 468 SFGGGYGGGSSGGGSSGGGHGG 489
Score = 28.5 bits (62), Expect = 2.8
Identities = 12/22 (54%), Positives = 13/22 (59%)
Query: 144 GSSSSGSSSGSGSSSGGGGGAG 165
G SS G SSG G G GG +G
Sbjct: 475 GGSSGGGSSGGGHGGGHGGSSG 496
Score = 27.7 bits (60), Expect = 4.8
Identities = 12/24 (50%), Positives = 12/24 (50%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGGAG 165
SSG GSS G G GGG G
Sbjct: 526 SSGGYGGGSSGGGGGGYGGGSSGG 549
Score = 27.3 bits (59), Expect = 6.2
Identities = 13/34 (38%), Positives = 14/34 (41%)
Query: 133 EISIYEDRCSSGSSSSGSSSGSGSSSGGGGGAGA 166
EI Y SS G G GS GG GG +
Sbjct: 445 EIQTYRSLLEGEGSSGGGGRGGGSFGGGYGGGSS 478
Score = 27.3 bits (59), Expect = 6.2
Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Query: 142 SSGSSSSGSSSGS--GSSSGGGGGAGA 166
S G GSSSG GSSSGG GG +
Sbjct: 509 SGGGYGGGSSSGGHGGSSSGGYGGGSS 535
Score = 27.3 bits (59), Expect = 6.2
Identities = 12/22 (54%), Positives = 12/22 (54%)
Query: 144 GSSSSGSSSGSGSSSGGGGGAG 165
G SSSG G S GGGG G
Sbjct: 523 GGSSSGGYGGGSSGGGGGGYGG 544
Score = 26.9 bits (58), Expect = 8.1
Identities = 13/26 (50%), Positives = 13/26 (50%)
Query: 140 RCSSGSSSSGSSSGSGSSSGGGGGAG 165
R SS S S SG G GG GG G
Sbjct: 4 RYSSSKHYSSSRSGGGGGGGGCGGGG 29
>gi|55956899 keratin 9 [Homo sapiens]
Length = 623
Score = 32.7 bits (73), Expect = 0.15
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGGAGAR 167
S G+ GS SG GS G GGG+G+R
Sbjct: 554 SGGNYGGGSGSGGGSGGGYGGGSGSR 579
Score = 31.6 bits (70), Expect = 0.33
Identities = 14/24 (58%), Positives = 15/24 (62%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGGAG 165
S GS GS SG GS G GGG+G
Sbjct: 516 SGGSYGGGSGSGGGSGGGYGGGSG 539
Score = 31.2 bits (69), Expect = 0.43
Identities = 13/23 (56%), Positives = 15/23 (65%)
Query: 143 SGSSSSGSSSGSGSSSGGGGGAG 165
SG S G S GSG + GGG G+G
Sbjct: 543 SGGSGGGHSGGSGGNYGGGSGSG 565
Score = 30.8 bits (68), Expect = 0.56
Identities = 14/24 (58%), Positives = 14/24 (58%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGGAG 165
S GS GS GSG S GGGG G
Sbjct: 481 SGGSYGRGSRGGSGGSYGGGGSGG 504
Score = 29.6 bits (65), Expect = 1.3
Identities = 13/24 (54%), Positives = 13/24 (54%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGGAG 165
S SG S G GS SGGG G G
Sbjct: 510 SGSRGGSGGSYGGGSGSGGGSGGG 533
Score = 29.3 bits (64), Expect = 1.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 143 SGSSSSGSSSGSGSSSGGGGGAGAR 167
S S GS G GS G GGG+G+R
Sbjct: 489 SRGGSGGSYGGGGSGGGYGGGSGSR 513
Score = 28.9 bits (63), Expect = 2.1
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 145 SSSSGSSSGSGSSSGGGGGAG 165
S SG + G GS SGGG G G
Sbjct: 551 SGGSGGNYGGGSGSGGGSGGG 571
Score = 28.5 bits (62), Expect = 2.8
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGGAG 165
S G S GS G SG GGG+G
Sbjct: 546 SGGGHSGGSGGNYGGGSGSGGGSG 569
Score = 27.7 bits (60), Expect = 4.8
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
Query: 140 RCSSGSS---SSGSSSGSGSSSGGGGGAG 165
R SG S SGS GSG GGG G G
Sbjct: 513 RGGSGGSYGGGSGSGGGSGGGYGGGSGGG 541
Score = 27.7 bits (60), Expect = 4.8
Identities = 12/20 (60%), Positives = 13/20 (65%)
Query: 147 SSGSSSGSGSSSGGGGGAGA 166
S G SGSG SGGG G G+
Sbjct: 519 SYGGGSGSGGGSGGGYGGGS 538
Score = 27.7 bits (60), Expect = 4.8
Identities = 12/23 (52%), Positives = 12/23 (52%)
Query: 143 SGSSSSGSSSGSGSSSGGGGGAG 165
SG S GSGS G GGG G
Sbjct: 551 SGGSGGNYGGGSGSGGGSGGGYG 573
Score = 27.7 bits (60), Expect = 4.8
Identities = 12/18 (66%), Positives = 12/18 (66%)
Query: 148 SGSSSGSGSSSGGGGGAG 165
SGS GSG S GGG G G
Sbjct: 576 SGSRGGSGGSHGGGSGFG 593
Score = 27.7 bits (60), Expect = 4.8
Identities = 12/23 (52%), Positives = 13/23 (56%)
Query: 143 SGSSSSGSSSGSGSSSGGGGGAG 165
SG S G SGS G GGG+G
Sbjct: 596 SGGSYGGGEEASGSGGGYGGGSG 618
Score = 27.3 bits (59), Expect = 6.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGGAG 165
S G S GSGS G GGG G
Sbjct: 512 SRGGSGGSYGGGSGSGGGSGGGYG 535
Score = 27.3 bits (59), Expect = 6.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGGAG 165
S G S G GSGS G GG G
Sbjct: 564 SGGGSGGGYGGGSGSRGGSGGSHG 587
Score = 26.9 bits (58), Expect = 8.1
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGGAG 165
SSG G GSG GGG G+G
Sbjct: 107 SSGGFGGGFGGGSGGGFGGGYGSG 130
>gi|140561024 CASK-interacting protein CIP98 isoform 1 [Homo
sapiens]
Length = 907
Score = 32.7 bits (73), Expect = 0.15
Identities = 16/25 (64%), Positives = 18/25 (72%)
Query: 143 SGSSSSGSSSGSGSSSGGGGGAGAR 167
S SSSS S GS + +GGGGGAG R
Sbjct: 9 SVSSSSTGSLGSAAGAGGGGGAGLR 33
Score = 28.9 bits (63), Expect = 2.1
Identities = 15/24 (62%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Query: 144 GSSSSGSSSGS-GSSSGGGGGAGA 166
G S S SS+GS GS++G GGG GA
Sbjct: 7 GLSVSSSSTGSLGSAAGAGGGGGA 30
>gi|186928829 dermokine isoform 4 precursor [Homo sapiens]
Length = 386
Score = 32.7 bits (73), Expect = 0.15
Identities = 18/24 (75%), Positives = 18/24 (75%), Gaps = 2/24 (8%)
Query: 142 SSGSSSSGSSSG--SGSSSGGGGG 163
SSG SSSGSSSG SG SSGG G
Sbjct: 268 SSGGSSSGSSSGGSSGGSSGGSSG 291
Score = 32.0 bits (71), Expect = 0.25
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGGAG 165
++GSSS GSSSGS S GG +G
Sbjct: 264 NNGSSSGGSSSGSSSGGSSGGSSG 287
Score = 32.0 bits (71), Expect = 0.25
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Query: 142 SSGSSSSGSSSG-SGSSSGGGGGA 164
SSGSSS GSS G SG SSG GG+
Sbjct: 273 SSGSSSGGSSGGSSGGSSGNSGGS 296
Score = 30.4 bits (67), Expect = 0.74
Identities = 14/22 (63%), Positives = 15/22 (68%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGG 163
SSG SS GSS GS +SGG G
Sbjct: 277 SSGGSSGGSSGGSSGNSGGSRG 298
Score = 30.0 bits (66), Expect = 0.96
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGG 163
SS SS+GSSSG+ SGGG G
Sbjct: 304 SSWGSSTGSSSGNHGGSGGGNG 325
Score = 29.6 bits (65), Expect = 1.3
Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 3/28 (10%)
Query: 142 SSGSSSSGSSSG---SGSSSGGGGGAGA 166
S+G +++GSSSG SGSSSGG G +
Sbjct: 259 SNGDNNNGSSSGGSSSGSSSGGSSGGSS 286
Score = 29.3 bits (64), Expect = 1.6
Identities = 16/27 (59%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 140 RCSSGSSSS-GSSSGSGSSSGGGGGAG 165
R SGS SS GSS+GS S + GG G G
Sbjct: 297 RGDSGSESSWGSSTGSSSGNHGGSGGG 323
Score = 28.1 bits (61), Expect = 3.7
Identities = 13/22 (59%), Positives = 14/22 (63%)
Query: 144 GSSSSGSSSGSGSSSGGGGGAG 165
GSS+SG SGS S S G G G
Sbjct: 240 GSSNSGGGSGSQSGSSGSGSNG 261
Score = 27.7 bits (60), Expect = 4.8
Identities = 13/21 (61%), Positives = 13/21 (61%)
Query: 142 SSGSSSSGSSSGSGSSSGGGG 162
SSG SS GSS SG S G G
Sbjct: 281 SSGGSSGGSSGNSGGSRGDSG 301
>gi|186928827 dermokine isoform 5 precursor [Homo sapiens]
Length = 398
Score = 32.7 bits (73), Expect = 0.15
Identities = 18/24 (75%), Positives = 18/24 (75%), Gaps = 2/24 (8%)
Query: 142 SSGSSSSGSSSG--SGSSSGGGGG 163
SSG SSSGSSSG SG SSGG G
Sbjct: 268 SSGGSSSGSSSGGSSGGSSGGSSG 291
Score = 32.0 bits (71), Expect = 0.25
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGGAG 165
++GSSS GSSSGS S GG +G
Sbjct: 264 NNGSSSGGSSSGSSSGGSSGGSSG 287
Score = 32.0 bits (71), Expect = 0.25
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Query: 142 SSGSSSSGSSSG-SGSSSGGGGGA 164
SSGSSS GSS G SG SSG GG+
Sbjct: 273 SSGSSSGGSSGGSSGGSSGNSGGS 296
Score = 30.4 bits (67), Expect = 0.74
Identities = 14/22 (63%), Positives = 15/22 (68%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGG 163
SSG SS GSS GS +SGG G
Sbjct: 277 SSGGSSGGSSGGSSGNSGGSRG 298
Score = 30.0 bits (66), Expect = 0.96
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGG 163
SS SS+GSSSG+ SGGG G
Sbjct: 304 SSWGSSTGSSSGNHGGSGGGNG 325
Score = 29.6 bits (65), Expect = 1.3
Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 3/28 (10%)
Query: 142 SSGSSSSGSSSG---SGSSSGGGGGAGA 166
S+G +++GSSSG SGSSSGG G +
Sbjct: 259 SNGDNNNGSSSGGSSSGSSSGGSSGGSS 286
Score = 29.3 bits (64), Expect = 1.6
Identities = 16/27 (59%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 140 RCSSGSSSS-GSSSGSGSSSGGGGGAG 165
R SGS SS GSS+GS S + GG G G
Sbjct: 297 RGDSGSESSWGSSTGSSSGNHGGSGGG 323
Score = 28.1 bits (61), Expect = 3.7
Identities = 13/22 (59%), Positives = 14/22 (63%)
Query: 144 GSSSSGSSSGSGSSSGGGGGAG 165
GSS+SG SGS S S G G G
Sbjct: 240 GSSNSGGGSGSQSGSSGSGSNG 261
Score = 27.7 bits (60), Expect = 4.8
Identities = 13/21 (61%), Positives = 13/21 (61%)
Query: 142 SSGSSSSGSSSGSGSSSGGGG 162
SSG SS GSS SG S G G
Sbjct: 281 SSGGSSGGSSGNSGGSRGDSG 301
>gi|186928825 dermokine isoform 3 precursor [Homo sapiens]
Length = 416
Score = 32.7 bits (73), Expect = 0.15
Identities = 18/24 (75%), Positives = 18/24 (75%), Gaps = 2/24 (8%)
Query: 142 SSGSSSSGSSSG--SGSSSGGGGG 163
SSG SSSGSSSG SG SSGG G
Sbjct: 268 SSGGSSSGSSSGGSSGGSSGGSSG 291
Score = 32.0 bits (71), Expect = 0.25
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGGAG 165
++GSSS GSSSGS S GG +G
Sbjct: 264 NNGSSSGGSSSGSSSGGSSGGSSG 287
Score = 32.0 bits (71), Expect = 0.25
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Query: 142 SSGSSSSGSSSG-SGSSSGGGGGA 164
SSGSSS GSS G SG SSG GG+
Sbjct: 273 SSGSSSGGSSGGSSGGSSGNSGGS 296
Score = 30.4 bits (67), Expect = 0.74
Identities = 14/22 (63%), Positives = 15/22 (68%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGG 163
SSG SS GSS GS +SGG G
Sbjct: 277 SSGGSSGGSSGGSSGNSGGSRG 298
Score = 30.0 bits (66), Expect = 0.96
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGG 163
SS SS+GSSSG+ SGGG G
Sbjct: 304 SSWGSSTGSSSGNHGGSGGGNG 325
Score = 29.6 bits (65), Expect = 1.3
Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 3/28 (10%)
Query: 142 SSGSSSSGSSSG---SGSSSGGGGGAGA 166
S+G +++GSSSG SGSSSGG G +
Sbjct: 259 SNGDNNNGSSSGGSSSGSSSGGSSGGSS 286
Score = 29.3 bits (64), Expect = 1.6
Identities = 16/27 (59%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 140 RCSSGSSSS-GSSSGSGSSSGGGGGAG 165
R SGS SS GSS+GS S + GG G G
Sbjct: 297 RGDSGSESSWGSSTGSSSGNHGGSGGG 323
Score = 28.1 bits (61), Expect = 3.7
Identities = 13/22 (59%), Positives = 14/22 (63%)
Query: 144 GSSSSGSSSGSGSSSGGGGGAG 165
GSS+SG SGS S S G G G
Sbjct: 240 GSSNSGGGSGSQSGSSGSGSNG 261
Score = 27.7 bits (60), Expect = 4.8
Identities = 13/21 (61%), Positives = 13/21 (61%)
Query: 142 SSGSSSSGSSSGSGSSSGGGG 162
SSG SS GSS SG S G G
Sbjct: 281 SSGGSSGGSSGNSGGSRGDSG 301
>gi|33504489 dermokine isoform 2 precursor [Homo sapiens]
Length = 476
Score = 32.7 bits (73), Expect = 0.15
Identities = 18/24 (75%), Positives = 18/24 (75%), Gaps = 2/24 (8%)
Query: 142 SSGSSSSGSSSG--SGSSSGGGGG 163
SSG SSSGSSSG SG SSGG G
Sbjct: 268 SSGGSSSGSSSGGSSGGSSGGSSG 291
Score = 32.0 bits (71), Expect = 0.25
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGGAG 165
++GSSS GSSSGS S GG +G
Sbjct: 264 NNGSSSGGSSSGSSSGGSSGGSSG 287
Score = 32.0 bits (71), Expect = 0.25
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Query: 142 SSGSSSSGSSSG-SGSSSGGGGGA 164
SSGSSS GSS G SG SSG GG+
Sbjct: 273 SSGSSSGGSSGGSSGGSSGNSGGS 296
Score = 30.4 bits (67), Expect = 0.74
Identities = 14/22 (63%), Positives = 15/22 (68%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGG 163
SSG SS GSS GS +SGG G
Sbjct: 277 SSGGSSGGSSGGSSGNSGGSRG 298
Score = 30.0 bits (66), Expect = 0.96
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGG 163
SS SS+GSSSG+ SGGG G
Sbjct: 304 SSWGSSTGSSSGNHGGSGGGNG 325
Score = 29.6 bits (65), Expect = 1.3
Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 3/28 (10%)
Query: 142 SSGSSSSGSSSG---SGSSSGGGGGAGA 166
S+G +++GSSSG SGSSSGG G +
Sbjct: 259 SNGDNNNGSSSGGSSSGSSSGGSSGGSS 286
Score = 29.3 bits (64), Expect = 1.6
Identities = 16/27 (59%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 140 RCSSGSSSS-GSSSGSGSSSGGGGGAG 165
R SGS SS GSS+GS S + GG G G
Sbjct: 297 RGDSGSESSWGSSTGSSSGNHGGSGGG 323
Score = 28.1 bits (61), Expect = 3.7
Identities = 13/22 (59%), Positives = 14/22 (63%)
Query: 144 GSSSSGSSSGSGSSSGGGGGAG 165
GSS+SG SGS S S G G G
Sbjct: 240 GSSNSGGGSGSQSGSSGSGSNG 261
Score = 27.7 bits (60), Expect = 4.8
Identities = 13/21 (61%), Positives = 13/21 (61%)
Query: 142 SSGSSSSGSSSGSGSSSGGGG 162
SSG SS GSS SG S G G
Sbjct: 281 SSGGSSGGSSGNSGGSRGDSG 301
>gi|169881239 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
[Homo sapiens]
Length = 660
Score = 32.7 bits (73), Expect = 0.15
Identities = 19/30 (63%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Query: 140 RCSSGSSSSG--SSSGSGSSSGGGGGAGAR 167
R SSGSSSSG +S GS S SGGGG +R
Sbjct: 601 RQSSGSSSSGFGASRGSSSRSGGGGYGNSR 630
>gi|13514809 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
[Homo sapiens]
Length = 660
Score = 32.7 bits (73), Expect = 0.15
Identities = 19/30 (63%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Query: 140 RCSSGSSSSG--SSSGSGSSSGGGGGAGAR 167
R SSGSSSSG +S GS S SGGGG +R
Sbjct: 601 RQSSGSSSSGFGASRGSSSRSGGGGYGNSR 630
>gi|84993742 tripartite motif-containing 71 [Homo sapiens]
Length = 868
Score = 32.7 bits (73), Expect = 0.15
Identities = 16/25 (64%), Positives = 18/25 (72%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGGAGA 166
S+ S+SS SS S SS GGGGG GA
Sbjct: 27 SNSSASSSSSQTSTSSGGGGGGPGA 51
Score = 32.0 bits (71), Expect = 0.25
Identities = 15/22 (68%), Positives = 18/22 (81%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGG 163
SS SS+S SSS + +SSGGGGG
Sbjct: 26 SSNSSASSSSSQTSTSSGGGGG 47
>gi|149363700 syntaxin binding protein 5-like [Homo sapiens]
Length = 1186
Score = 32.7 bits (73), Expect = 0.15
Identities = 14/22 (63%), Positives = 18/22 (81%)
Query: 145 SSSSGSSSGSGSSSGGGGGAGA 166
+SS GS S SGS+SGGG G+G+
Sbjct: 15 ASSPGSGSSSGSNSGGGAGSGS 36
>gi|119395750 keratin 1 [Homo sapiens]
Length = 644
Score = 32.3 bits (72), Expect = 0.19
Identities = 15/24 (62%), Positives = 16/24 (66%)
Query: 143 SGSSSSGSSSGSGSSSGGGGGAGA 166
SG SS GS GS S GGGGG G+
Sbjct: 554 SGGSSYGSGGGSYGSGGGGGGHGS 577
Score = 31.6 bits (70), Expect = 0.33
Identities = 16/25 (64%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Query: 143 SGSSSSGSSSGS-GSSSGGGGGAGA 166
SG SS GS GS GS GGGGG G+
Sbjct: 527 SGGSSYGSGGGSYGSGGGGGGGRGS 551
Score = 30.8 bits (68), Expect = 0.56
Identities = 16/27 (59%), Positives = 17/27 (62%), Gaps = 3/27 (11%)
Query: 144 GSSSSGSSSGS---GSSSGGGGGAGAR 167
GS SGSSSG GS GGGG +G R
Sbjct: 576 GSYGSGSSSGGYRGGSGGGGGGSSGGR 602
Score = 29.6 bits (65), Expect = 1.3
Identities = 13/24 (54%), Positives = 13/24 (54%)
Query: 144 GSSSSGSSSGSGSSSGGGGGAGAR 167
GS S SG GS GGGG G R
Sbjct: 526 GSGGSSYGSGGGSYGSGGGGGGGR 549
Score = 29.6 bits (65), Expect = 1.3
Identities = 14/29 (48%), Positives = 14/29 (48%)
Query: 137 YEDRCSSGSSSSGSSSGSGSSSGGGGGAG 165
Y SSG GS G G SSGG G G
Sbjct: 578 YGSGSSSGGYRGGSGGGGGGSSGGRGSGG 606
Score = 29.6 bits (65), Expect = 1.3
Identities = 15/26 (57%), Positives = 16/26 (61%)
Query: 140 RCSSGSSSSGSSSGSGSSSGGGGGAG 165
R S G SS GS G GSSSGG +G
Sbjct: 602 RGSGGGSSGGSIGGRGSSSGGVKSSG 627
Score = 29.3 bits (64), Expect = 1.6
Identities = 14/26 (53%), Positives = 14/26 (53%)
Query: 140 RCSSGSSSSGSSSGSGSSSGGGGGAG 165
R S GS S SG GS GGGG G
Sbjct: 549 RGSYGSGGSSYGSGGGSYGSGGGGGG 574
Score = 28.9 bits (63), Expect = 2.1
Identities = 13/23 (56%), Positives = 14/23 (60%)
Query: 144 GSSSSGSSSGSGSSSGGGGGAGA 166
G SS G SG GSS G GG G+
Sbjct: 596 GGSSGGRGSGGGSSGGSIGGRGS 618
Score = 28.5 bits (62), Expect = 2.8
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 91 METHYEKVLKKISRYIQEQNEKIFAPRGLLLTDPVERGMRVIEISIYEDRCS-----SGS 145
+E ++ + ++R +++ E + L L R + E S C+ S S
Sbjct: 447 LEDALQQAKEDLARLLRDYQELMNTKLALDLEIATYRTLLEGEESRMSGECAPNVSVSVS 506
Query: 146 SSSGSSSGSGSSSGGGGGAGA 166
+S + SG GS GGGGG G+
Sbjct: 507 TSHTTISGGGSRGGGGGGYGS 527
Score = 28.5 bits (62), Expect = 2.8
Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
Query: 144 GSSSSGSSSGSGSSS---GGGGGAG 165
G S GSS GSG S GGGGG G
Sbjct: 524 GYGSGGSSYGSGGGSYGSGGGGGGG 548
Score = 27.7 bits (60), Expect = 4.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Query: 140 RCSSGSSSSGSSSGSGSSSGGGGGA 164
R SG GSS G GS G GG+
Sbjct: 588 RGGSGGGGGGSSGGRGSGGGSSGGS 612
Score = 26.9 bits (58), Expect = 8.1
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 137 YEDRCSSGSSS-SGSSSGSGSSSGGGGGA 164
Y+ R +S S+ SG G SS GGGGG+
Sbjct: 27 YQRRTTSSSTRRSGGGGGRFSSCGGGGGS 55
Score = 26.9 bits (58), Expect = 8.1
Identities = 12/28 (42%), Positives = 13/28 (46%)
Query: 140 RCSSGSSSSGSSSGSGSSSGGGGGAGAR 167
R G S G G S G GGG G+R
Sbjct: 38 RSGGGGGRFSSCGGGGGSFGAGGGFGSR 65
Score = 26.9 bits (58), Expect = 8.1
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 5/29 (17%)
Query: 142 SSGSSSSGSSSGSGSSSGG-----GGGAG 165
S G S GSGSSSGG GGG G
Sbjct: 568 SGGGGGGHGSYGSGSSSGGYRGGSGGGGG 596
>gi|154091020 leucine-rich repeats and calponin homology (CH) domain
containing 2 [Homo sapiens]
Length = 765
Score = 32.3 bits (72), Expect = 0.19
Identities = 13/22 (59%), Positives = 15/22 (68%)
Query: 144 GSSSSGSSSGSGSSSGGGGGAG 165
G GSS G G++ GGGGGAG
Sbjct: 15 GCGGGGSSGGCGTAGGGGGGAG 36
Score = 29.6 bits (65), Expect = 1.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Query: 141 CSSGSSSSGSSSGSGSSSGGGGGAG 165
C G SS G + G G GGG G
Sbjct: 16 CGGGGSSGGCGTAGGGGGGAGGGGG 40
Score = 28.9 bits (63), Expect = 2.1
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGGAG 165
SSG + G G+ GGGGG G
Sbjct: 21 SSGGCGTAGGGGGGAGGGGGGGGG 44
Score = 28.1 bits (61), Expect = 3.7
Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 4/27 (14%)
Query: 144 GSSSSGSSSGSGSSSG----GGGGAGA 166
G+S G G GSS G GGGG GA
Sbjct: 9 GNSGGGGCGGGGSSGGCGTAGGGGGGA 35
>gi|47132620 keratin 2 [Homo sapiens]
Length = 639
Score = 32.3 bits (72), Expect = 0.19
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGGAGAR 167
S G S GSSSG G SGGGG + +
Sbjct: 598 SGGGSRGGSSSGGGYGSGGGGSSSVK 623
Score = 30.4 bits (67), Expect = 0.74
Identities = 14/22 (63%), Positives = 15/22 (68%)
Query: 144 GSSSSGSSSGSGSSSGGGGGAG 165
G SSG S GSSSGGG G+G
Sbjct: 594 GKHSSGGGSRGGSSSGGGYGSG 615
Score = 30.0 bits (66), Expect = 0.96
Identities = 14/25 (56%), Positives = 15/25 (60%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGGAGA 166
SSGSSS GS S GG GG G+
Sbjct: 533 SSGSSSYGSGGRQSGSRGGSGGGGS 557
Score = 28.9 bits (63), Expect = 2.1
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 145 SSSSGSSSGSGSSSGGGGGAG 165
S S G S G GS SGGG G+G
Sbjct: 546 SGSRGGSGGGGSISGGGYGSG 566
Score = 28.5 bits (62), Expect = 2.8
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Query: 142 SSGSSSSGSSSGSGSSSGGG---GGAGAR 167
S G S GS SG G SGGG G G+R
Sbjct: 575 SGGGSKGGSISGGGYGSGGGKHSSGGGSR 603
Score = 28.1 bits (61), Expect = 3.7
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 132 IEISIYEDRCSSGSSSS---GSSSGSGSSSGGGGGAGA 166
+ +S+ SS +S G S G GSSSGGG +G+
Sbjct: 499 VTVSVTSSTISSNVASKAAFGGSGGRGSSSGGGYSSGS 536
Score = 27.7 bits (60), Expect = 4.8
Identities = 12/20 (60%), Positives = 12/20 (60%)
Query: 144 GSSSSGSSSGSGSSSGGGGG 163
GS GS SG G SGGG G
Sbjct: 551 GSGGGGSISGGGYGSGGGSG 570
Score = 27.3 bits (59), Expect = 6.2
Identities = 13/24 (54%), Positives = 13/24 (54%)
Query: 144 GSSSSGSSSGSGSSSGGGGGAGAR 167
GSS G S SG GGGG G R
Sbjct: 99 GSSFGGGSGFSGGGFGGGGFGGGR 122
Score = 27.3 bits (59), Expect = 6.2
Identities = 13/24 (54%), Positives = 14/24 (58%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGGAG 165
S G SG S GS SGGG G+G
Sbjct: 569 SGGRYGSGGGSKGGSISGGGYGSG 592
>gi|46358366 zinc finger protein 746 [Homo sapiens]
Length = 644
Score = 32.3 bits (72), Expect = 0.19
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Query: 132 IEISIYEDRCS----SGSSSSGSSSGSGSSSGGGGGAGAR 167
+ +S ++ C SG + G SGSG GG GG AR
Sbjct: 466 VSLSAHQRSCGAPDGSGPGTGGGGSGSGGGGGGSGGGSAR 505
>gi|55956910 meningioma 1 [Homo sapiens]
Length = 1320
Score = 32.0 bits (71), Expect = 0.25
Identities = 14/23 (60%), Positives = 16/23 (69%)
Query: 144 GSSSSGSSSGSGSSSGGGGGAGA 166
G +S S+ G G SSGGGGG GA
Sbjct: 762 GVNSPPSAGGGGGSSGGGGGGGA 784
>gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens]
Length = 1215
Score = 32.0 bits (71), Expect = 0.25
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 4/33 (12%)
Query: 133 EISIYEDRCSSGSSSSGSSSGSGSSSGGGGGAG 165
EI +Y SS ++ G++ G G SGGGGGAG
Sbjct: 120 EICMY----SSFNTGGGAAGGPGDDSGGGGGAG 148
Score = 30.0 bits (66), Expect = 0.96
Identities = 12/17 (70%), Positives = 12/17 (70%)
Query: 149 GSSSGSGSSSGGGGGAG 165
G G G SSGGGGGAG
Sbjct: 19 GGGGGGGGSSGGGGGAG 35
>gi|59709427 XK, Kell blood group complex subunit-related family,
member 4 [Homo sapiens]
Length = 650
Score = 32.0 bits (71), Expect = 0.25
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 141 CSSGSSSSGSSSGSGSSSG-GGGGAGA 166
C +GS S S GSG +G GGGGAG+
Sbjct: 67 CCAGSGGSAGSGGSGGVAGPGGGGAGS 93
Score = 28.1 bits (61), Expect = 3.7
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGGAGA 166
S GS+ SG S G GGG G+ A
Sbjct: 71 SGGSAGSGGSGGVAGPGGGGAGSAA 95
>gi|110347455 Brn3b POU domain transcription factor [Homo sapiens]
Length = 409
Score = 32.0 bits (71), Expect = 0.25
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGGAGAR 167
+S SSS ++ G G GGGGG G R
Sbjct: 44 ASSPSSSSNAGGGGGGGGGGGGGGGR 69
Score = 31.6 bits (70), Expect = 0.33
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 142 SSGSSSSGSSSGSGSSSGGGGGAG 165
S+ S SS S++G G GGGGG G
Sbjct: 43 SASSPSSSSNAGGGGGGGGGGGGG 66
Score = 27.7 bits (60), Expect = 4.8
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 4/28 (14%)
Query: 142 SSGSSS----SGSSSGSGSSSGGGGGAG 165
S GSS+ S SS S S++GGGGG G
Sbjct: 33 SPGSSAPIAPSASSPSSSSNAGGGGGGG 60
Score = 27.7 bits (60), Expect = 4.8
Identities = 14/24 (58%), Positives = 14/24 (58%)
Query: 144 GSSSSGSSSGSGSSSGGGGGAGAR 167
G S SSS SGSS GGG A R
Sbjct: 66 GGGRSSSSSSSGSSGGGGSEAMRR 89
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,442,447
Number of Sequences: 37866
Number of extensions: 281399
Number of successful extensions: 8330
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 277
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 4454
Number of HSP's gapped (non-prelim): 2772
length of query: 167
length of database: 18,247,518
effective HSP length: 95
effective length of query: 72
effective length of database: 14,650,248
effective search space: 1054817856
effective search space used: 1054817856
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.