Guide to the Human Genome
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Name: STXBP5L Sequence: fasta or formatted (1186aa) NCBI GI: 149363700
Description:

syntaxin binding protein 5-like

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         66           2
 C cysteine            2.6         31           1
 D aspartate           4.3         51           2
 E glutamate           6.4         76           2
 F phenylalanine       4.1         49           1
 G glycine             6.9         82           3
 H histidine           2.4         29           2
 I isoleucine          6.2         74           3
 K lysine              5.3         63           2
 L leucine             8.8        104           2
 M methionine          2.6         31           2
 N asparagine          3.5         42           2
 P proline             5.9         70           2
 Q glutamine           4.1         49           2
 R arginine            4.8         57           2
 S serine             10.0        119           3
 T threonine           6.0         71           2
 V valine              5.8         69           3
 W tryptophan          1.3         15           1
 Y tyrosine            3.2         38           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   syntaxin binding protein 5-like 
STXBP5                0.646   syntaxin binding protein 5 (tomosyn) isoform b [Hom...
STXBP5                0.642   syntaxin binding protein 5 (tomosyn) isoform a [Hom...
LLGL1                 0.127   lethal giant larvae homolog 1 
LLGL2                 0.127   lethal giant larvae homolog 2 isoform c 
LLGL2                 0.127   lethal giant larvae homolog 2 isoform a 
LLGL2                 0.061   lethal giant larvae homolog 2 isoform b 
STXBP6                0.010   amisyn 
GNB1L                 0.009   guanine nucleotide binding protein beta-subunit-like...
PAK1IP1               0.008   PAK1 interacting protein 1 
TBL1X                 0.007   transducin beta-like 1X isoform b 
TBL1X                 0.007   transducin beta-like 1X isoform b 
TBL1X                 0.007   transducin beta-like 1X isoform a 
TBL1X                 0.007   transducin beta-like 1X isoform a 
WDFY2                 0.007   WD repeat and FYVE domain containing 2 
TBL1Y                 0.007   transducin beta-like 1Y 
TBL1Y                 0.007   transducin beta-like 1Y 
TBL1Y                 0.007   transducin beta-like 1Y 
GEMIN5                0.006   gemin 5 
GTF3C2                0.006   general transcription factor IIIC, polypeptide 2, be...
GTF3C2                0.006   general transcription factor IIIC, polypeptide 2, bet...
NLE1                  0.006   Notchless gene homolog isoform b 
NLE1                  0.006   Notchless gene homolog isoform a 
TEP1                  0.006   telomerase-associated protein 1 
PHIP                  0.005   pleckstrin homology domain interacting protein [Homo...
TBL1XR1               0.005   transducin (beta)-like 1 X-linked receptor 1 
STRN4                 0.005   zinedin isoform 2 
STRN4                 0.005   zinedin isoform 1 
WDR12                 0.005   WD repeat domain 12 protein 
WDHD1                 0.005   WD repeat and HMG-box DNA binding protein 1 isoform ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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