Guide to the Human Genome
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Name: NAP1L3 Sequence: fasta or formatted (506aa) NCBI GI: 21327710
Description:

nucleosome assembly protein 1-like 3

Referenced in:

Histones, Related Proteins, and Modifying Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         27           2
 C cysteine            1.0          5           1
 D aspartate           6.9         35           2
 E glutamate          12.8         65           4
 F phenylalanine       3.8         19           2
 G glycine             4.3         22           1
 H histidine           1.4          7           1
 I isoleucine          4.5         23           2
 K lysine              9.3         47           2
 L leucine             4.7         24           1
 M methionine          1.4          7           1
 N asparagine          3.6         18           1
 P proline             7.5         38           2
 Q glutamine           2.8         14           1
 R arginine            5.7         29           2
 S serine             10.1         51           7
 T threonine           4.3         22           3
 V valine              6.3         32           2
 W tryptophan          1.0          5           1
 Y tyrosine            3.2         16           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nucleosome assembly protein 1-like 3 
NAP1L1                0.184   nucleosome assembly protein 1-like 1 
NAP1L1                0.184   nucleosome assembly protein 1-like 1 
NAP1L4                0.165   nucleosome assembly protein 1-like 4 
NAP1L2                0.152   nucleosome assembly protein 1-like 2 
NAP1L5                0.049   nucleosome assembly protein 1-like 5 
MLLT3                 0.039   myeloid/lymphoid or mixed-lineage leukemia (trithor...
TSPYL1                0.037   TSPY-like 1 
NEFH                  0.036   neurofilament, heavy polypeptide 200kDa 
TTN                   0.035   titin isoform N2-A 
LOC100129700          0.035   PREDICTED: similar to hCG1805148 
SET                   0.035   SET translocation (myeloid leukemia-associated) iso...
TNRC18                0.035   trinucleotide repeat containing 18 
SET                   0.034   SET translocation (myeloid leukemia-associated) iso...
SFRS18                0.033   splicing factor, arginine/serine-rich 130 
SFRS18                0.033   splicing factor, arginine/serine-rich 130 
SETD1A                0.032   SET domain containing 1A 
SRRM2                 0.032   splicing coactivator subunit SRm300 
CYLC1                 0.032   cylicin, basic protein of sperm head cytoskeleton 1...
PNN                   0.032   pinin, desmosome associated protein 
TSPYL4                0.032   TSPY-like 4 
LOC646817             0.030   PREDICTED: similar to SET translocation 
LOC646817             0.030   PREDICTED: similar to SET translocation 
LOC646817             0.030   PREDICTED: similar to SET translocation 
CALD1                 0.030   caldesmon 1 isoform 1 
TRDN                  0.030   triadin 
CHD1                  0.029   chromodomain helicase DNA binding protein 1 
ZCCHC10               0.029   zinc finger, CCHC domain containing 10 
CHD9                  0.029   chromodomain helicase DNA binding protein 9 
DSPP                  0.029   dentin sialophosphoprotein preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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