Guide to the Human Genome
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Name: ZNF281 Sequence: fasta or formatted (895aa) NCBI GI: 6912752
Description:

zinc finger protein 281

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         45           3
 C cysteine            1.5         13           1
 D aspartate           3.8         34           2
 E glutamate           5.6         50           2
 F phenylalanine       3.8         34           1
 G glycine             8.8         79           7
 H histidine           4.1         37           8
 I isoleucine          4.2         38           2
 K lysine              6.5         58           2
 L leucine             6.6         59           2
 M methionine          2.0         18           2
 N asparagine          3.7         33           2
 P proline             6.6         59           5
 Q glutamine           7.3         65           3
 R arginine            3.9         35           2
 S serine             14.7        132           4
 T threonine           5.6         50           2
 V valine              4.1         37           1
 W tryptophan          0.1          1           1
 Y tyrosine            2.0         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 281 
ZNF148                0.210   zinc finger protein 148 
ZNF180                0.057   zinc finger protein 180 
ZNF16                 0.056   zinc finger protein 16 
ZNF16                 0.056   zinc finger protein 16 
ZFP28                 0.055   zinc finger protein 28 
ZNF468                0.055   zinc finger protein ZNF468 isoform 1 
ZNF468                0.055   zinc finger protein ZNF468 isoform 2 
ZSCAN22               0.055   zinc finger and SCAN domain containing 22 
ZFP3                  0.055   zinc finger protein-3 
LOC100292052          0.054   PREDICTED: similar to hCG1773661 
LOC100287226          0.054   PREDICTED: similar to hCG1773661 
LOC100287226          0.054   PREDICTED: hypothetical protein XP_002343677 
ZNF782                0.054   zinc finger protein 782 
ZNF235                0.054   zinc finger protein 93 homolog 
ZNF527                0.054   zinc finger protein 527 
ZNF429                0.054   zinc finger protein 429 
ZNF470                0.053   zinc finger protein 470 
ZNF70                 0.053   zinc finger protein 70 
ZNF436                0.053   zinc finger protein 436 
ZNF436                0.053   zinc finger protein 436 
ZNF135                0.053   zinc finger protein 135 
ZNF726                0.053   PREDICTED: zinc finger protein 726 
ZNF726                0.053   PREDICTED: zinc finger protein 726 
ZNF726                0.053   PREDICTED: zinc finger protein 726 
ZNF677                0.053   zinc finger protein 677 
ZNF7                  0.053   zinc finger protein 7 
ZNF79                 0.053   zinc finger protein 79 
ZNF184                0.053   zinc finger protein 184 
ZNF28                 0.053   zinc finger protein 28 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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