Guide to the Human Genome
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Search of human proteins with 58218977

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|58218977 adropin [Homo sapiens]
         (76 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|58218977 adropin [Homo sapiens]                                    161   9e-41
gi|62000702 diacylglycerol kinase kappa [Homo sapiens]                 31   0.19 
gi|169214048 PREDICTED: hypothetical protein [Homo sapiens]            31   0.25 
gi|89057602 PREDICTED: hypothetical protein [Homo sapiens]             31   0.25 
gi|37551995 PREDICTED: hypothetical protein [Homo sapiens]             31   0.25 
gi|218505798 protocadherin 15 isoform CD1-10 precursor [Homo sap...    30   0.32 
gi|218505783 protocadherin 15 isoform CD1-8 precursor [Homo sapi...    30   0.32 
gi|218505781 protocadherin 15 isoform CD1-7 precursor [Homo sapi...    30   0.32 
gi|13540513 oxysterol binding protein 2 isoform a [Homo sapiens]       30   0.32 
gi|109948265 solute carrier family 35, member A2 isoform c [Homo...    30   0.32 
gi|54792146 tripartite motif-containing 47 [Homo sapiens]              30   0.32 
gi|5032211 solute carrier family 35, member A2 isoform a [Homo s...    30   0.32 
gi|39995093 parathyroid hormone-like hormone isoform 1 prepropro...    30   0.42 
gi|39995091 parathyroid hormone-like hormone isoform 1 prepropro...    30   0.42 
gi|39995089 parathyroid hormone-like hormone isoform 2 prepropro...    30   0.42 
gi|4506269 parathyroid hormone-like hormone isoform 2 preproprot...    30   0.42 
gi|4505349 necdin [Homo sapiens]                                       30   0.42 
gi|239750235 PREDICTED: hypothetical protein [Homo sapiens]            30   0.42 
gi|239744535 PREDICTED: hypothetical protein XP_002343184 [Homo ...    30   0.42 
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [...    30   0.55 
gi|32481209 mitogen-activated protein kinase-activated protein k...    29   0.72 
gi|10863901 mitogen-activated protein kinase-activated protein k...    29   0.72 
gi|32261318 unc-5 homolog B [Homo sapiens]                             29   0.72 
gi|115387123 protocadherin 15 isoform CD1-4 precursor [Homo sapi...    29   0.72 
gi|218505793 protocadherin 15 isoform CD3-2 precursor [Homo sapi...    29   0.72 
gi|218505791 protocadherin 15 isoform CD3-1 precursor [Homo sapi...    29   0.72 
gi|218505789 protocadherin 15 isoform CD2-2 precursor [Homo sapi...    29   0.72 
gi|218505787 protocadherin 15 isoform CD2-1 precursor [Homo sapi...    29   0.72 
gi|218505785 protocadherin 15 isoform CD1-9 precursor [Homo sapi...    29   0.72 
gi|218505779 protocadherin 15 isoform CD1-6 precursor [Homo sapi...    29   0.72 

>gi|58218977 adropin [Homo sapiens]
          Length = 76

 Score =  161 bits (408), Expect = 9e-41
 Identities = 76/76 (100%), Positives = 76/76 (100%)

Query: 1  MGAAISQGALIAIVCNGLVGFLLLLLWVILCWACHSRSADVDSLSESSPNSSPGPCPEKA 60
          MGAAISQGALIAIVCNGLVGFLLLLLWVILCWACHSRSADVDSLSESSPNSSPGPCPEKA
Sbjct: 1  MGAAISQGALIAIVCNGLVGFLLLLLWVILCWACHSRSADVDSLSESSPNSSPGPCPEKA 60

Query: 61 PPPQKPSHEGSYLLQP 76
          PPPQKPSHEGSYLLQP
Sbjct: 61 PPPQKPSHEGSYLLQP 76


>gi|62000702 diacylglycerol kinase kappa [Homo sapiens]
          Length = 1271

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 13/20 (65%), Positives = 14/20 (70%)

Query: 44 LSESSPNSSPGPCPEKAPPP 63
          LSE+SP   P PCPE AP P
Sbjct: 46 LSEASPEPIPEPCPELAPGP 65


>gi|169214048 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 881

 Score = 30.8 bits (68), Expect = 0.25
 Identities = 14/36 (38%), Positives = 20/36 (55%)

Query: 2   GAAISQGALIAIVCNGLVGFLLLLLWVILCWACHSR 37
           G  +S GA+  IV   L+G  LL + ++LC  C  R
Sbjct: 769 GPTLSHGAIAGIVLGSLLGLALLAVLLLLCICCLCR 804


>gi|89057602 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 881

 Score = 30.8 bits (68), Expect = 0.25
 Identities = 14/36 (38%), Positives = 20/36 (55%)

Query: 2   GAAISQGALIAIVCNGLVGFLLLLLWVILCWACHSR 37
           G  +S GA+  IV   L+G  LL + ++LC  C  R
Sbjct: 769 GPTLSHGAIAGIVLGSLLGLALLAVLLLLCICCLCR 804


>gi|37551995 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 867

 Score = 30.8 bits (68), Expect = 0.25
 Identities = 14/36 (38%), Positives = 20/36 (55%)

Query: 2   GAAISQGALIAIVCNGLVGFLLLLLWVILCWACHSR 37
           G  +S GA+  IV   L+G  LL + ++LC  C  R
Sbjct: 769 GPTLSHGAIAGIVLGSLLGLALLAVLLLLCICCLCR 804


>gi|218505798 protocadherin 15 isoform CD1-10 precursor [Homo sapiens]
          Length = 1932

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 18/74 (24%), Positives = 40/74 (54%), Gaps = 4/74 (5%)

Query: 6    SQGALIAIVCNGLVGFLLLLLWVILCW----ACHSRSADVDSLSESSPNSSPGPCPEKAP 61
            ++GAL+A+    ++  +  +L V++ +    A  +++A + +   ++  + P P P  AP
Sbjct: 1351 TEGALLALAFIIILCCIPAILVVLVSYRQRQAECTKTARIQAALPAAKPAVPAPAPVAAP 1410

Query: 62   PPQKPSHEGSYLLQ 75
            PP  P   G++L +
Sbjct: 1411 PPPPPPPPGAHLYE 1424



 Score = 26.6 bits (57), Expect = 4.6
 Identities = 10/18 (55%), Positives = 10/18 (55%)

Query: 49   PNSSPGPCPEKAPPPQKP 66
            PN SP  CP   PPP  P
Sbjct: 1715 PNISPSACPLPPPPPISP 1732


>gi|218505783 protocadherin 15 isoform CD1-8 precursor [Homo sapiens]
          Length = 1915

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 18/74 (24%), Positives = 40/74 (54%), Gaps = 4/74 (5%)

Query: 6    SQGALIAIVCNGLVGFLLLLLWVILCW----ACHSRSADVDSLSESSPNSSPGPCPEKAP 61
            ++GAL+A+    ++  +  +L V++ +    A  +++A + +   ++  + P P P  AP
Sbjct: 1336 TEGALLALAFIIILCCIPAILVVLVSYRQRQAECTKTARIQAALPAAKPAVPAPAPVAAP 1395

Query: 62   PPQKPSHEGSYLLQ 75
            PP  P   G++L +
Sbjct: 1396 PPPPPPPPGAHLYE 1409



 Score = 26.6 bits (57), Expect = 4.6
 Identities = 10/18 (55%), Positives = 10/18 (55%)

Query: 49   PNSSPGPCPEKAPPPQKP 66
            PN SP  CP   PPP  P
Sbjct: 1698 PNISPSACPLPPPPPISP 1715


>gi|218505781 protocadherin 15 isoform CD1-7 precursor [Homo sapiens]
          Length = 1952

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 18/74 (24%), Positives = 40/74 (54%), Gaps = 4/74 (5%)

Query: 6    SQGALIAIVCNGLVGFLLLLLWVILCW----ACHSRSADVDSLSESSPNSSPGPCPEKAP 61
            ++GAL+A+    ++  +  +L V++ +    A  +++A + +   ++  + P P P  AP
Sbjct: 1373 TEGALLALAFIIILCCIPAILVVLVSYRQRQAECTKTARIQAALPAAKPAVPAPAPVAAP 1432

Query: 62   PPQKPSHEGSYLLQ 75
            PP  P   G++L +
Sbjct: 1433 PPPPPPPPGAHLYE 1446



 Score = 26.6 bits (57), Expect = 4.6
 Identities = 10/18 (55%), Positives = 10/18 (55%)

Query: 49   PNSSPGPCPEKAPPPQKP 66
            PN SP  CP   PPP  P
Sbjct: 1735 PNISPSACPLPPPPPISP 1752


>gi|13540513 oxysterol binding protein 2 isoform a [Homo sapiens]
          Length = 916

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 15 CNGLVGFLLLLLWVILCWACHSRSADVDSLSESSPNSSPGPCPEKAPPPQK 65
          C G    L  L  V+ C +CH+ +  + S S S     P P P+  P P++
Sbjct: 13 CGGRSRGLSSLFTVVPCLSCHTAAPGM-SASTSGSGPEPKPQPQPVPEPER 62


>gi|109948265 solute carrier family 35, member A2 isoform c [Homo
           sapiens]
          Length = 393

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 5/35 (14%)

Query: 47  SSPNSSPGPC-----PEKAPPPQKPSHEGSYLLQP 76
           S+  S+ GPC     P + PPPQ  SH G  + +P
Sbjct: 350 SASASASGPCVHQQPPGQPPPPQLSSHRGDLITEP 384


>gi|54792146 tripartite motif-containing 47 [Homo sapiens]
          Length = 638

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 14/33 (42%), Positives = 16/33 (48%)

Query: 35  HSRSADVDSLSESSPNSSPGPCPEKAPPPQKPS 67
           H+ S  +     S P S PGP P  AP P  PS
Sbjct: 71  HTLSELLQLRQGSGPGSGPGPAPALAPEPSAPS 103


>gi|5032211 solute carrier family 35, member A2 isoform a [Homo
           sapiens]
          Length = 396

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 5/35 (14%)

Query: 47  SSPNSSPGPC-----PEKAPPPQKPSHEGSYLLQP 76
           S+  S+ GPC     P + PPPQ  SH G  + +P
Sbjct: 350 SASASASGPCVHQQPPGQPPPPQLSSHRGDLITEP 384


>gi|39995093 parathyroid hormone-like hormone isoform 1
           preproprotein [Homo sapiens]
          Length = 177

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 38  SADVDSLSESSPNSSPGPCPEKAPPPQKPSHEGSYLLQ 75
           +A++ + SE SPNS P P  +  P       EG YL Q
Sbjct: 69  TAEIRATSEVSPNSKPSPNTKNHPVRFGSDDEGRYLTQ 106


>gi|39995091 parathyroid hormone-like hormone isoform 1
           preproprotein [Homo sapiens]
          Length = 177

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 38  SADVDSLSESSPNSSPGPCPEKAPPPQKPSHEGSYLLQ 75
           +A++ + SE SPNS P P  +  P       EG YL Q
Sbjct: 69  TAEIRATSEVSPNSKPSPNTKNHPVRFGSDDEGRYLTQ 106


>gi|39995089 parathyroid hormone-like hormone isoform 2
           preproprotein [Homo sapiens]
          Length = 175

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 38  SADVDSLSESSPNSSPGPCPEKAPPPQKPSHEGSYLLQ 75
           +A++ + SE SPNS P P  +  P       EG YL Q
Sbjct: 69  TAEIRATSEVSPNSKPSPNTKNHPVRFGSDDEGRYLTQ 106


>gi|4506269 parathyroid hormone-like hormone isoform 2 preproprotein
           [Homo sapiens]
          Length = 175

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 38  SADVDSLSESSPNSSPGPCPEKAPPPQKPSHEGSYLLQ 75
           +A++ + SE SPNS P P  +  P       EG YL Q
Sbjct: 69  TAEIRATSEVSPNSKPSPNTKNHPVRFGSDDEGRYLTQ 106


>gi|4505349 necdin [Homo sapiens]
          Length = 321

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 12/23 (52%), Positives = 14/23 (60%)

Query: 48 SPNSSPGPCPEKAPPPQKPSHEG 70
          SP   P   P+ APPPQ P+ EG
Sbjct: 43 SPPLGPTAAPQAAPPPQAPNDEG 65


>gi|239750235 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 257

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 19/50 (38%), Positives = 23/50 (46%)

Query: 22  LLLLLWVILCWACHSRSADVDSLSESSPNSSPGPCPEKAPPPQKPSHEGS 71
           L L L++ L     S  +   S S SSP+SSP       PPP  PS   S
Sbjct: 162 LFLPLFIPLFLLPSSSPSSSSSPSYSSPSSSPSSSSPLPPPPPPPSFSSS 211


>gi|239744535 PREDICTED: hypothetical protein XP_002343184 [Homo
           sapiens]
          Length = 257

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 19/50 (38%), Positives = 23/50 (46%)

Query: 22  LLLLLWVILCWACHSRSADVDSLSESSPNSSPGPCPEKAPPPQKPSHEGS 71
           L L L++ L     S  +   S S SSP+SSP       PPP  PS   S
Sbjct: 162 LFLPLFIPLFLLPSSSPSSSSSPSYSSPSSSPSSSSPLPPPPPPPSFSSS 211


>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [Homo
            sapiens]
          Length = 3969

 Score = 29.6 bits (65), Expect = 0.55
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 3/34 (8%)

Query: 41   VDSLSESSPNSSPGPCPEKA---PPPQKPSHEGS 71
            VDS  + +P++   P P+K+   PPP+KP  E S
Sbjct: 1238 VDSSQKPTPSAREDPAPKKSSSEPPPRKPVEEKS 1271


>gi|32481209 mitogen-activated protein kinase-activated protein
          kinase 2 isoform 2 [Homo sapiens]
          Length = 400

 Score = 29.3 bits (64), Expect = 0.72
 Identities = 13/24 (54%), Positives = 14/24 (58%)

Query: 44 LSESSPNSSPGPCPEKAPPPQKPS 67
          LS S   S P P P  APPPQ P+
Sbjct: 2  LSNSQGQSPPVPFPAPAPPPQPPT 25


>gi|10863901 mitogen-activated protein kinase-activated protein
          kinase 2 isoform 1 [Homo sapiens]
          Length = 370

 Score = 29.3 bits (64), Expect = 0.72
 Identities = 13/24 (54%), Positives = 14/24 (58%)

Query: 44 LSESSPNSSPGPCPEKAPPPQKPS 67
          LS S   S P P P  APPPQ P+
Sbjct: 2  LSNSQGQSPPVPFPAPAPPPQPPT 25


>gi|32261318 unc-5 homolog B [Homo sapiens]
          Length = 945

 Score = 29.3 bits (64), Expect = 0.72
 Identities = 16/38 (42%), Positives = 19/38 (50%)

Query: 24 LLLWVILCWACHSRSADVDSLSESSPNSSPGPCPEKAP 61
          LLL ++LCW      A  DS SE  P+S P    E  P
Sbjct: 11 LLLALLLCWDPRLSQAGTDSGSEVLPDSFPSAPAEPLP 48


>gi|115387123 protocadherin 15 isoform CD1-4 precursor [Homo sapiens]
          Length = 1955

 Score = 29.3 bits (64), Expect = 0.72
 Identities = 18/77 (23%), Positives = 40/77 (51%), Gaps = 7/77 (9%)

Query: 6    SQGALIAIVCNGLVGFLLLLLWVILCW-------ACHSRSADVDSLSESSPNSSPGPCPE 58
            ++GAL+A+    ++  +  +L V++ +       A  +++A + +   ++  + P P P 
Sbjct: 1373 TEGALLALAFIIILCCIPAILVVLVSYRQFKVRQAECTKTARIQAALPAAKPAVPAPAPV 1432

Query: 59   KAPPPQKPSHEGSYLLQ 75
             APPP  P   G++L +
Sbjct: 1433 AAPPPPPPPPPGAHLYE 1449



 Score = 26.6 bits (57), Expect = 4.6
 Identities = 10/18 (55%), Positives = 10/18 (55%)

Query: 49   PNSSPGPCPEKAPPPQKP 66
            PN SP  CP   PPP  P
Sbjct: 1738 PNISPSACPLPPPPPISP 1755


>gi|218505793 protocadherin 15 isoform CD3-2 precursor [Homo sapiens]
          Length = 1677

 Score = 29.3 bits (64), Expect = 0.72
 Identities = 18/77 (23%), Positives = 40/77 (51%), Gaps = 7/77 (9%)

Query: 6    SQGALIAIVCNGLVGFLLLLLWVILCW-------ACHSRSADVDSLSESSPNSSPGPCPE 58
            ++GAL+A+    ++  +  +L V++ +       A  +++A + +   ++  + P P P 
Sbjct: 1373 TEGALLALAFIIILCCIPAILVVLVSYRQFKVRQAECTKTARIQAALPAAKPAVPAPAPV 1432

Query: 59   KAPPPQKPSHEGSYLLQ 75
             APPP  P   G++L +
Sbjct: 1433 AAPPPPPPPPPGAHLYE 1449


>gi|218505791 protocadherin 15 isoform CD3-1 precursor [Homo sapiens]
          Length = 1682

 Score = 29.3 bits (64), Expect = 0.72
 Identities = 18/77 (23%), Positives = 40/77 (51%), Gaps = 7/77 (9%)

Query: 6    SQGALIAIVCNGLVGFLLLLLWVILCW-------ACHSRSADVDSLSESSPNSSPGPCPE 58
            ++GAL+A+    ++  +  +L V++ +       A  +++A + +   ++  + P P P 
Sbjct: 1378 TEGALLALAFIIILCCIPAILVVLVSYRQFKVRQAECTKTARIQAALPAAKPAVPAPAPV 1437

Query: 59   KAPPPQKPSHEGSYLLQ 75
             APPP  P   G++L +
Sbjct: 1438 AAPPPPPPPPPGAHLYE 1454


>gi|218505789 protocadherin 15 isoform CD2-2 precursor [Homo sapiens]
          Length = 1539

 Score = 29.3 bits (64), Expect = 0.72
 Identities = 18/77 (23%), Positives = 40/77 (51%), Gaps = 7/77 (9%)

Query: 6    SQGALIAIVCNGLVGFLLLLLWVILCW-------ACHSRSADVDSLSESSPNSSPGPCPE 58
            ++GAL+A+    ++  +  +L V++ +       A  +++A + +   ++  + P P P 
Sbjct: 1373 TEGALLALAFIIILCCIPAILVVLVSYRQFKVRQAECTKTARIQAALPAAKPAVPAPAPV 1432

Query: 59   KAPPPQKPSHEGSYLLQ 75
             APPP  P   G++L +
Sbjct: 1433 AAPPPPPPPPPGAHLYE 1449


>gi|218505787 protocadherin 15 isoform CD2-1 precursor [Homo sapiens]
          Length = 1790

 Score = 29.3 bits (64), Expect = 0.72
 Identities = 18/77 (23%), Positives = 40/77 (51%), Gaps = 7/77 (9%)

Query: 6    SQGALIAIVCNGLVGFLLLLLWVILCW-------ACHSRSADVDSLSESSPNSSPGPCPE 58
            ++GAL+A+    ++  +  +L V++ +       A  +++A + +   ++  + P P P 
Sbjct: 1385 TEGALLALAFIIILCCIPAILVVLVSYRQFKVRQAECTKTARIQAALPAAKPAVPAPAPV 1444

Query: 59   KAPPPQKPSHEGSYLLQ 75
             APPP  P   G++L +
Sbjct: 1445 AAPPPPPPPPPGAHLYE 1461


>gi|218505785 protocadherin 15 isoform CD1-9 precursor [Homo sapiens]
          Length = 1935

 Score = 29.3 bits (64), Expect = 0.72
 Identities = 18/77 (23%), Positives = 40/77 (51%), Gaps = 7/77 (9%)

Query: 6    SQGALIAIVCNGLVGFLLLLLWVILCW-------ACHSRSADVDSLSESSPNSSPGPCPE 58
            ++GAL+A+    ++  +  +L V++ +       A  +++A + +   ++  + P P P 
Sbjct: 1351 TEGALLALAFIIILCCIPAILVVLVSYRQFKVRQAECTKTARIQAALPAAKPAVPAPAPV 1410

Query: 59   KAPPPQKPSHEGSYLLQ 75
             APPP  P   G++L +
Sbjct: 1411 AAPPPPPPPPPGAHLYE 1427



 Score = 26.6 bits (57), Expect = 4.6
 Identities = 10/18 (55%), Positives = 10/18 (55%)

Query: 49   PNSSPGPCPEKAPPPQKP 66
            PN SP  CP   PPP  P
Sbjct: 1718 PNISPSACPLPPPPPISP 1735


>gi|218505779 protocadherin 15 isoform CD1-6 precursor [Homo sapiens]
          Length = 1886

 Score = 29.3 bits (64), Expect = 0.72
 Identities = 18/77 (23%), Positives = 40/77 (51%), Gaps = 7/77 (9%)

Query: 6    SQGALIAIVCNGLVGFLLLLLWVILCW-------ACHSRSADVDSLSESSPNSSPGPCPE 58
            ++GAL+A+    ++  +  +L V++ +       A  +++A + +   ++  + P P P 
Sbjct: 1302 TEGALLALAFIIILCCIPAILVVLVSYRQFKVRQAECTKTARIQAALPAAKPAVPAPAPV 1361

Query: 59   KAPPPQKPSHEGSYLLQ 75
             APPP  P   G++L +
Sbjct: 1362 AAPPPPPPPPPGAHLYE 1378



 Score = 26.6 bits (57), Expect = 4.6
 Identities = 10/18 (55%), Positives = 10/18 (55%)

Query: 49   PNSSPGPCPEKAPPPQKP 66
            PN SP  CP   PPP  P
Sbjct: 1669 PNISPSACPLPPPPPISP 1686


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.135    0.441 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,048,185
Number of Sequences: 37866
Number of extensions: 198775
Number of successful extensions: 3206
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 2926
Number of HSP's gapped (non-prelim): 310
length of query: 76
length of database: 18,247,518
effective HSP length: 48
effective length of query: 28
effective length of database: 16,429,950
effective search space: 460038600
effective search space used: 460038600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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