Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: MAPKAPK2 Sequence: fasta or formatted (370aa) NCBI GI: 10863901
Description:

mitogen-activated protein kinase-activated protein kinase 2 isoform 1

Referenced in:

MAP Kinase Pathways

Other entries for this name:
alt prot [400aa] mitogen-activated protein kinase-activated protein kinase 2 isofo...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         18           1
 C cysteine            2.2          8           1
 D aspartate           4.1         15           2
 E glutamate           6.5         24           2
 F phenylalanine       3.2         12           1
 G glycine             4.9         18           2
 H histidine           3.0         11           1
 I isoleucine          5.9         22           2
 K lysine              6.8         25           2
 L leucine             8.9         33           2
 M methionine          3.2         12           1
 N asparagine          3.8         14           1
 P proline            10.3         38           6
 Q glutamine           5.7         21           2
 R arginine            4.9         18           2
 S serine              5.9         22           1
 T threonine           5.7         21           2
 V valine              5.1         19           1
 W tryptophan          1.6          6           1
 Y tyrosine            3.5         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitogen-activated protein kinase-activated protein k... 
MAPKAPK2              0.949   mitogen-activated protein kinase-activated protein k...
MAPKAPK3              0.613   mitogen-activated protein kinase-activated protein ki...
MAPKAPK5              0.312   MAP kinase-activated protein kinase 5 isoform 2 [Hom...
MAPKAPK5              0.312   MAP kinase-activated protein kinase 5 isoform 1 [Hom...
RPS6KA1               0.235   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
RPS6KA1               0.235   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
CAMK1                 0.224   calcium/calmodulin-dependent protein kinase I 
CAMK1G                0.219   calcium/calmodulin-dependent protein kinase IG [Homo...
CAMK1D                0.216   calcium/calmodulin-dependent protein kinase ID isofor...
CAMK1D                0.216   calcium/calmodulin-dependent protein kinase ID isofo...
CAMK4                 0.216   calcium/calmodulin-dependent protein kinase IV 
PNCK                  0.211   pregnancy upregulated non-ubiquitously expressed Ca...
RPS6KA3               0.211   ribosomal protein S6 kinase, 90kDa, polypeptide 3 [Ho...
PNCK                  0.207   pregnancy upregulated non-ubiquitously expressed Ca...
RPS6KA5               0.206   ribosomal protein S6 kinase, polypeptide 5 isoform a...
PSKH1                 0.202   protein serine kinase H1 
RPS6KA2               0.200   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
RPS6KA2               0.200   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
MKNK1                 0.194   MAP kinase-interacting serine/threonine kinase 1 is...
RPS6KA6               0.191   ribosomal protein S6 kinase polypeptide 6 
MKNK1                 0.188   MAP kinase-interacting serine/threonine kinase 1 iso...
RPS6KA4               0.188   ribosomal protein S6 kinase, 90kDa, polypeptide 4 is...
STK33                 0.183   serine/threonine kinase 33 
RPS6KA4               0.183   ribosomal protein S6 kinase, 90kDa, polypeptide 4 iso...
DCLK1                 0.183   doublecortin-like kinase 1 
CHEK2                 0.182   protein kinase CHK2 isoform c 
CHEK2                 0.182   protein kinase CHK2 isoform a 
DCLK2                 0.182   doublecortin-like kinase 2 isoform b 
DCLK2                 0.182   doublecortin-like kinase 2 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press