Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: MAPKAPK2 Sequence: fasta or formatted (400aa) NCBI GI: 32481209
Description:

mitogen-activated protein kinase-activated protein kinase 2 isoform 2

Referenced in:

MAP Kinase Pathways

Other entries for this name:
alt prot [370aa] mitogen-activated protein kinase-activated protein kinase 2 isofo...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         26           3
 C cysteine            1.8          7           1
 D aspartate           3.8         15           2
 E glutamate           7.2         29           2
 F phenylalanine       3.0         12           1
 G glycine             4.2         17           2
 H histidine           2.8         11           1
 I isoleucine          6.2         25           2
 K lysine              7.5         30           2
 L leucine             9.0         36           3
 M methionine          3.5         14           1
 N asparagine          3.5         14           1
 P proline             9.8         39           6
 Q glutamine           5.2         21           2
 R arginine            5.2         21           2
 S serine              5.8         23           1
 T threonine           5.2         21           2
 V valine              5.0         20           1
 W tryptophan          1.2          5           1
 Y tyrosine            3.5         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitogen-activated protein kinase-activated protein k... 
MAPKAPK2              0.891   mitogen-activated protein kinase-activated protein k...
MAPKAPK3              0.639   mitogen-activated protein kinase-activated protein ki...
MAPKAPK5              0.316   MAP kinase-activated protein kinase 5 isoform 2 [Hom...
MAPKAPK5              0.316   MAP kinase-activated protein kinase 5 isoform 1 [Hom...
RPS6KA1               0.221   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
RPS6KA1               0.221   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
CAMK1                 0.211   calcium/calmodulin-dependent protein kinase I 
CAMK1G                0.206   calcium/calmodulin-dependent protein kinase IG [Homo...
CAMK1D                0.203   calcium/calmodulin-dependent protein kinase ID isofor...
CAMK1D                0.203   calcium/calmodulin-dependent protein kinase ID isofo...
CAMK4                 0.203   calcium/calmodulin-dependent protein kinase IV 
PNCK                  0.198   pregnancy upregulated non-ubiquitously expressed Ca...
RPS6KA3               0.198   ribosomal protein S6 kinase, 90kDa, polypeptide 3 [Ho...
PNCK                  0.194   pregnancy upregulated non-ubiquitously expressed Ca...
RPS6KA5               0.193   ribosomal protein S6 kinase, polypeptide 5 isoform a...
PSKH1                 0.189   protein serine kinase H1 
RPS6KA2               0.188   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
RPS6KA2               0.188   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
RPS6KA4               0.184   ribosomal protein S6 kinase, 90kDa, polypeptide 4 is...
MKNK1                 0.182   MAP kinase-interacting serine/threonine kinase 1 is...
RPS6KA4               0.180   ribosomal protein S6 kinase, 90kDa, polypeptide 4 iso...
RPS6KA6               0.179   ribosomal protein S6 kinase polypeptide 6 
MKNK1                 0.177   MAP kinase-interacting serine/threonine kinase 1 iso...
STK33                 0.177   serine/threonine kinase 33 
CAMK2D                0.172   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.172   calcium/calmodulin-dependent protein kinase II delt...
DCLK2                 0.172   doublecortin-like kinase 2 isoform b 
DCLK2                 0.172   doublecortin-like kinase 2 isoform a 
DCLK1                 0.172   doublecortin-like kinase 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press