NDN 29033

Name: NDN	Sequence: fasta or formatted (321aa)		NCBI GI: 4505349
Description: necdin		Referenced in: Melanoma Antigen Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.9 35 2 C cysteine 0.3 1 1 D aspartate 3.4 11 1 E glutamate 8.1 26 2 F phenylalanine 3.1 10 2 G glycine 4.4 14 1 H histidine 2.2 7 1 I isoleucine 3.4 11 2 K lysine 5.6 18 2 L leucine 9.7 31 3 M methionine 3.4 11 1 N asparagine 2.2 7 1 P proline 10.0 32 3 Q glutamine 4.7 15 2 R arginine 6.9 22 2 S serine 7.5 24 2 T threonine 3.1 10 1 V valine 6.2 20 1 W tryptophan 2.2 7 1 Y tyrosine 2.8 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 necdin MAGED2 0.266 melanoma antigen family D, 2 MAGED2 0.266 melanoma antigen family D, 2 MAGED2 0.266 melanoma antigen family D, 2 TRO 0.253 trophinin isoform 5 TRO 0.253 trophinin isoform 2 TRO 0.253 trophinin isoform 2 NDNL2 0.253 necdin-like 2 MAGEF1 0.248 melanoma antigen family F, 1 MAGED1 0.231 melanoma antigen family D, 1 isoform a MAGED1 0.231 melanoma antigen family D, 1 isoform b MAGED1 0.231 melanoma antigen family D, 1 isoform b MAGED4B 0.218 melanoma antigen family D, 4B isoform 2 MAGED4B 0.218 melanoma antigen family D, 4B isoform 1 MAGED4B 0.218 melanoma antigen family D, 4B isoform 1 MAGED4 0.218 melanoma antigen family D, 4 MAGEL2 0.215 MAGE-like protein 2 MAGEB4 0.207 melanoma antigen family B, 4 MAGEE1 0.200 melanoma antigen family E, 1 MAGEB1 0.197 melanoma antigen family B, 1 MAGEB1 0.197 melanoma antigen family B, 1 MAGEB1 0.197 melanoma antigen family B, 1 MAGEB2 0.191 melanoma antigen family B, 2 LOC100292575 0.189 PREDICTED: similar to melanoma antigen family C, 2 ... MAGEA10 0.188 melanoma antigen family A, 10 MAGEA10 0.188 melanoma antigen family A, 10 MAGEB18 0.186 melanoma antigen family B, 18 MAGEB17 0.184 PREDICTED: melanoma antigen family B, 17 MAGEB17 0.184 PREDICTED: melanoma antigen family B, 17 MAGEB17 0.184 PREDICTED: melanoma antigen family B, 17 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.