Guide to the Human Genome
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Name: PTHLH Sequence: fasta or formatted (175aa) NCBI GI: 4506269
Description:

parathyroid hormone-like hormone isoform 2 preproprotein

Referenced in:

Bone and Related Tissues
Hedgehog and Related Pathways
Peptide and Protein G-coupled Signals

Other entries for this name:
alt mRNA [175aa] parathyroid hormone-like hormone isoform 2 preproprotein
alt prot [177aa] parathyroid hormone-like hormone isoform 1 preproprotein
alt prot [177aa] parathyroid hormone-like hormone isoform 1 preproprotein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0          7           1
 C cysteine            0.6          1           1
 D aspartate           4.6          8           2
 E glutamate           7.4         13           1
 F phenylalanine       2.3          4           2
 G glycine             6.9         12           1
 H histidine           4.0          7           2
 I isoleucine          2.3          4           1
 K lysine             10.3         18           4
 L leucine             9.7         17           2
 M methionine          0.6          1           1
 N asparagine          2.3          4           1
 P proline             4.6          8           1
 Q glutamine           4.6          8           2
 R arginine            9.7         17           3
 S serine             10.9         19           1
 T threonine           6.9         12           2
 V valine              5.7         10           1
 W tryptophan          1.1          2           1
 Y tyrosine            1.7          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   parathyroid hormone-like hormone isoform 2 preproprot... 
PTHLH                 1.000   parathyroid hormone-like hormone isoform 1 prepropro...
PTHLH                 1.000   parathyroid hormone-like hormone isoform 1 prepropro...
PTHLH                 1.000   parathyroid hormone-like hormone isoform 2 prepropro...
NUSAP1                0.034   nucleolar and spindle associated protein 1 isoform ...
NUSAP1                0.034   nucleolar and spindle associated protein 1 isoform ...
NUSAP1                0.034   nucleolar and spindle associated protein 1 isoform 2...
LOC100294364          0.027   PREDICTED: hypothetical protein 
PTH                   0.024   parathyroid hormone preproprotein 
IQCA1                 0.024   IQ motif containing with AAA domain 1 
SRRM2                 0.024   splicing coactivator subunit SRm300 
LOC100294088          0.021   PREDICTED: hypothetical protein, partial 
ING2                  0.021   inhibitor of growth family, member 2 
CHD4                  0.021   chromodomain helicase DNA binding protein 4 
SOX6                  0.021   SRY (sex determining region Y)-box 6 isoform 4 [Hom...
SOX6                  0.021   SRY (sex determining region Y)-box 6 isoform 2 [Homo...
TBC1D10B              0.021   TBC1 domain family, member 10B 
ABCF1                 0.018   ATP-binding cassette, sub-family F, member 1 isoform...
SAGE1                 0.018   sarcoma antigen 1 
STAG1                 0.018   stromal antigen 1 
GZMB                  0.018   granzyme B precursor 
TOX                   0.018   thymus high mobility group box protein TOX 
SH2D4A                0.018   SH2 domain containing 4A 
PPIG                  0.018   peptidylprolyl isomerase G 
GPRIN3                0.015   G protein-regulated inducer of neurite outgrowth 3 ...
C20orf151             0.015   hypothetical protein LOC140893 
LOC644717             0.015   PREDICTED: SAGE1-like protein-like 
LOC644717             0.015   PREDICTED: SAGE1-like protein-like 
LOC100133698          0.015   PREDICTED: hypothetical protein 
LOC644717             0.015   PREDICTED: SAGE1-like protein-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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