Guide to the Human Genome
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Name: OSBP2 Sequence: fasta or formatted (916aa) NCBI GI: 13540513
Description:

oxysterol binding protein 2 isoform a

Referenced in:

Oxysterol-binding Protein Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         66           3
 C cysteine            1.9         17           1
 D aspartate           4.5         41           3
 E glutamate           8.4         77           3
 F phenylalanine       2.5         23           1
 G glycine             6.9         63           3
 H histidine           3.1         28           2
 I isoleucine          3.2         29           2
 K lysine              5.9         54           2
 L leucine             9.8         90           2
 M methionine          2.2         20           1
 N asparagine          3.2         29           1
 P proline             6.1         56           2
 Q glutamine           3.5         32           2
 R arginine            5.5         50           4
 S serine             11.7        107           3
 T threonine           5.6         51           2
 V valine              4.7         43           2
 W tryptophan          1.9         17           1
 Y tyrosine            2.5         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   oxysterol binding protein 2 isoform a 
OSBP                  0.504   oxysterol binding protein 
OSBPL1A               0.169   oxysterol-binding protein-like 1A isoform B 
OSBPL3                0.141   oxysterol-binding protein-like protein 3 isoform d [...
OSBPL1A               0.141   oxysterol-binding protein-like 1A isoform A 
OSBPL2                0.136   oxysterol-binding protein-like protein 2 isoform 1 [H...
OSBPL2                0.135   oxysterol-binding protein-like protein 2 isoform 2 [...
OSBPL6                0.134   oxysterol-binding protein-like protein 6 isoform b [...
OSBPL6                0.134   oxysterol-binding protein-like protein 6 isoform a [...
OSBPL3                0.131   oxysterol-binding protein-like protein 3 isoform c [...
OSBPL3                0.131   oxysterol-binding protein-like protein 3 isoform b [...
OSBPL3                0.131   oxysterol-binding protein-like protein 3 isoform a [...
OSBPL7                0.124   oxysterol-binding protein-like protein 7 
OSBPL9                0.043   oxysterol binding protein-like 9 isoform d 
OSBPL5                0.043   oxysterol-binding protein-like protein 5 isoform a [...
OSBPL5                0.043   oxysterol-binding protein-like protein 5 isoform b ...
OSBPL5                0.043   oxysterol-binding protein-like protein 5 isoform b [...
OSBPL11               0.042   oxysterol binding protein-like 11 
OSBPL9                0.042   oxysterol binding protein-like 9 isoform e 
OSBPL10               0.040   oxysterol-binding protein-like protein 10 
OSBPL9                0.039   oxysterol binding protein-like 9 isoform f 
OSBPL8                0.037   oxysterol-binding protein-like protein 8 isoform b [...
OSBPL8                0.037   oxysterol-binding protein-like protein 8 isoform a [...
PLEKHA3               0.034   pleckstrin homology domain containing, family A (pho...
COL4A3BP              0.032   alpha 3 type IV collagen binding protein isoform 3 ...
COL4A3BP              0.032   alpha 3 type IV collagen binding protein isoform 1 [H...
COL4A3BP              0.031   alpha 3 type IV collagen binding protein isoform 2 [...
PLEKHA8               0.029   pleckstrin homology domain containing, family A (pho...
OSBPL9                0.018   oxysterol binding protein-like 9 isoform c 
OSBPL9                0.018   oxysterol binding protein-like 9 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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