Search of human proteins with 57863277

Search of human proteins with 57863277

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|57863277 vacuolar protein sorting 8 homolog isoform a [Homo
sapiens]
         (1428 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|57863277 vacuolar protein sorting 8 homolog isoform a [Homo s...  2846   0.0  
gi|57863275 vacuolar protein sorting 8 homolog isoform b [Homo s...  2837   0.0  
gi|14149702 ring finger protein 167 [Homo sapiens]                     41   0.009
gi|205830434 D4, zinc and double PHD fingers family 1 isoform c ...    36   0.30 
gi|205830430 D4, zinc and double PHD fingers family 1 isoform a ...    36   0.30 
gi|51599156 chromodomain helicase DNA binding protein 4 [Homo sa...    35   0.40 
gi|32189425 WD repeat domain 69 [Homo sapiens]                         35   0.40 
gi|11545739 F-box and WD repeat domain containing 4 [Homo sapiens]     35   0.40 
gi|5729852 guanine nucleotide-binding protein, beta-5 subunit is...    35   0.52 
gi|20336270 guanine nucleotide-binding protein, beta-5 subunit i...    35   0.52 
gi|29788758 ring finger protein 130 [Homo sapiens]                     35   0.52 
gi|205830432 D4, zinc and double PHD fingers family 1 isoform b ...    35   0.67 
gi|21281677 WD repeat domain 36 [Homo sapiens]                         34   0.88 
gi|150170725 zinc and ring finger 4 [Homo sapiens]                     34   0.88 
gi|130484567 HFM1 protein [Homo sapiens]                               34   0.88 
gi|21040269 ring finger protein 133 [Homo sapiens]                     34   1.2  
gi|16554629 WD repeat domain 5 [Homo sapiens]                          33   1.5  
gi|16554627 WD repeat domain 5 [Homo sapiens]                          33   1.5  
gi|24308089 chromodomain helicase DNA binding protein 5 [Homo sa...    33   1.5  
gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens]         33   1.5  
gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens]           33   2.0  
gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens]           33   2.0  
gi|34577087 ring finger protein 13 [Homo sapiens]                      33   2.0  
gi|6005864 ring finger protein 13 [Homo sapiens]                       33   2.0  
gi|83779014 katanin p80 subunit B 1 [Homo sapiens]                     33   2.6  
gi|52630326 chromodomain helicase DNA binding protein 3 isoform ...    33   2.6  
gi|52630322 chromodomain helicase DNA binding protein 3 isoform ...    33   2.6  
gi|158420731 chromodomain helicase DNA binding protein 3 isoform...    33   2.6  
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s...    32   3.3  
gi|110815834 F-box and WD-40 domain protein 10 [Homo sapiens]          32   3.3  

>gi|57863277 vacuolar protein sorting 8 homolog isoform a [Homo
            sapiens]
          Length = 1428

 Score = 2846 bits (7378), Expect = 0.0
 Identities = 1428/1428 (100%), Positives = 1428/1428 (100%)

Query: 1    MENEPDHENVEQSLCAKTSEEELNKSFNLEASLSKFSYIDMDKELEFKNDLIDDKEFDIP 60
            MENEPDHENVEQSLCAKTSEEELNKSFNLEASLSKFSYIDMDKELEFKNDLIDDKEFDIP
Sbjct: 1    MENEPDHENVEQSLCAKTSEEELNKSFNLEASLSKFSYIDMDKELEFKNDLIDDKEFDIP 60

Query: 61   QVDTPPTLESILNETDDEDESFILEDPTLLNIDTIDSHSYDTSSVASSDSGDRTNLKRKK 120
            QVDTPPTLESILNETDDEDESFILEDPTLLNIDTIDSHSYDTSSVASSDSGDRTNLKRKK
Sbjct: 61   QVDTPPTLESILNETDDEDESFILEDPTLLNIDTIDSHSYDTSSVASSDSGDRTNLKRKK 120

Query: 121  KLPDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFGK 180
            KLPDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFGK
Sbjct: 121  KLPDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFGK 180

Query: 181  DQNQALRLCLGSTSVGGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDA 240
            DQNQALRLCLGSTSVGGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDA
Sbjct: 181  DQNQALRLCLGSTSVGGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDA 240

Query: 241  HPPGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEP 300
            HPPGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEP
Sbjct: 241  HPPGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEP 300

Query: 301  LHSKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVA 360
            LHSKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVA
Sbjct: 301  LHSKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVA 360

Query: 361  VQNYVNPMLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTVVLLDS 420
            VQNYVNPMLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTVVLLDS
Sbjct: 361  VQNYVNPMLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTVVLLDS 420

Query: 421  VEKLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSY 480
            VEKLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSY
Sbjct: 421  VEKLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSY 480

Query: 481  GGQIFYLGTKSVYVMMLRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDASK 540
            GGQIFYLGTKSVYVMMLRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDASK
Sbjct: 481  GGQIFYLGTKSVYVMMLRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDASK 540

Query: 541  RKAIVADRMVEILFHYADRALKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLQRKDLLFSQ 600
            RKAIVADRMVEILFHYADRALKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLQRKDLLFSQ
Sbjct: 541  RKAIVADRMVEILFHYADRALKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLQRKDLLFSQ 600

Query: 601  MYDKLSENSVAKGVFLECLEPYILSDKLVGITPQVMKDLIVHFQDKKLMENVEALIVHMD 660
            MYDKLSENSVAKGVFLECLEPYILSDKLVGITPQVMKDLIVHFQDKKLMENVEALIVHMD
Sbjct: 601  MYDKLSENSVAKGVFLECLEPYILSDKLVGITPQVMKDLIVHFQDKKLMENVEALIVHMD 660

Query: 661  ITSLDIQQVVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFRVIAPPLNAGKTLTDEQVV 720
            ITSLDIQQVVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFRVIAPPLNAGKTLTDEQVV
Sbjct: 661  ITSLDIQQVVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFRVIAPPLNAGKTLTDEQVV 720

Query: 721  MGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASPEEEIYPYIRTL 780
            MGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASPEEEIYPYIRTL
Sbjct: 721  MGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASPEEEIYPYIRTL 780

Query: 781  LHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLAR 840
            LHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLAR
Sbjct: 781  LHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLAR 840

Query: 841  QLAKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMA 900
            QLAKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMA
Sbjct: 841  QLAKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMA 900

Query: 901  EKAEFYQICEFMYEREHQYDKIIDCYLRDPLREEEVFNYIHNILSIPGHSAEEKQSVWQK 960
            EKAEFYQICEFMYEREHQYDKIIDCYLRDPLREEEVFNYIHNILSIPGHSAEEKQSVWQK
Sbjct: 901  EKAEFYQICEFMYEREHQYDKIIDCYLRDPLREEEVFNYIHNILSIPGHSAEEKQSVWQK 960

Query: 961  AMDHIEELVSLKPCKAAELVATHFSGHIETVIKKLQNQVLLFKFLRSLLDPREGIHVNQE 1020
            AMDHIEELVSLKPCKAAELVATHFSGHIETVIKKLQNQVLLFKFLRSLLDPREGIHVNQE
Sbjct: 961  AMDHIEELVSLKPCKAAELVATHFSGHIETVIKKLQNQVLLFKFLRSLLDPREGIHVNQE 1020

Query: 1021 LLQISPCITEQFIELLCQFNPTQVIETLQVLECYRLEETIQITQKYQLHEVTAYLLEKKG 1080
            LLQISPCITEQFIELLCQFNPTQVIETLQVLECYRLEETIQITQKYQLHEVTAYLLEKKG
Sbjct: 1021 LLQISPCITEQFIELLCQFNPTQVIETLQVLECYRLEETIQITQKYQLHEVTAYLLEKKG 1080

Query: 1081 DIHGAFLIMLERLQSKLQEVTHQGENTKEDPSLKDVEDTMVETIALCQRNSHNLNQQQRE 1140
            DIHGAFLIMLERLQSKLQEVTHQGENTKEDPSLKDVEDTMVETIALCQRNSHNLNQQQRE
Sbjct: 1081 DIHGAFLIMLERLQSKLQEVTHQGENTKEDPSLKDVEDTMVETIALCQRNSHNLNQQQRE 1140

Query: 1141 ALWFPLLEAMMAPQKLSSSAIPHLHSEALKSLTMQVLNSMAAFIALPSILQRILQDPVYG 1200
            ALWFPLLEAMMAPQKLSSSAIPHLHSEALKSLTMQVLNSMAAFIALPSILQRILQDPVYG
Sbjct: 1141 ALWFPLLEAMMAPQKLSSSAIPHLHSEALKSLTMQVLNSMAAFIALPSILQRILQDPVYG 1200

Query: 1201 KGKLGEIQGLILGMLDTFNYEQTLLETTTSLLNQDLHWSLCNLRASVTRGLNPKQDYCSI 1260
            KGKLGEIQGLILGMLDTFNYEQTLLETTTSLLNQDLHWSLCNLRASVTRGLNPKQDYCSI
Sbjct: 1201 KGKLGEIQGLILGMLDTFNYEQTLLETTTSLLNQDLHWSLCNLRASVTRGLNPKQDYCSI 1260

Query: 1261 CLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTVEFEGQTRWTCYKCSSSNKVGKLSE 1320
            CLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTVEFEGQTRWTCYKCSSSNKVGKLSE
Sbjct: 1261 CLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTVEFEGQTRWTCYKCSSSNKVGKLSE 1320

Query: 1321 NSSEIKKGRITPSQVKMSPSYHQSKGDPTAKKGTSEPVLDPQQIQAFDQLCRLYRGSSRL 1380
            NSSEIKKGRITPSQVKMSPSYHQSKGDPTAKKGTSEPVLDPQQIQAFDQLCRLYRGSSRL
Sbjct: 1321 NSSEIKKGRITPSQVKMSPSYHQSKGDPTAKKGTSEPVLDPQQIQAFDQLCRLYRGSSRL 1380

Query: 1381 ALLTELSQNRSSESYRPFSGSQSAPAFNSIFQNENFQLQLIPPPVTED 1428
            ALLTELSQNRSSESYRPFSGSQSAPAFNSIFQNENFQLQLIPPPVTED
Sbjct: 1381 ALLTELSQNRSSESYRPFSGSQSAPAFNSIFQNENFQLQLIPPPVTED 1428


>gi|57863275 vacuolar protein sorting 8 homolog isoform b [Homo
            sapiens]
          Length = 1426

 Score = 2837 bits (7354), Expect = 0.0
 Identities = 1426/1428 (99%), Positives = 1426/1428 (99%), Gaps = 2/1428 (0%)

Query: 1    MENEPDHENVEQSLCAKTSEEELNKSFNLEASLSKFSYIDMDKELEFKNDLIDDKEFDIP 60
            MENEPDHENVEQSLCAKTSEEELNKSFNLEASLSKFSYIDMDKELEFKNDLIDDKEFDIP
Sbjct: 1    MENEPDHENVEQSLCAKTSEEELNKSFNLEASLSKFSYIDMDKELEFKNDLIDDKEFDIP 60

Query: 61   QVDTPPTLESILNETDDEDESFILEDPTLLNIDTIDSHSYDTSSVASSDSGDRTNLKRKK 120
            QVDTPPTLESILNETDDEDESFILEDPTLLNIDTIDSHSYDTSSVASSDSGDRTNLKRKK
Sbjct: 61   QVDTPPTLESILNETDDEDESFILEDPTLLNIDTIDSHSYDTSSVASSDSGDRTNLKRKK 120

Query: 121  KLPDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFGK 180
            KLPDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIF  
Sbjct: 121  KLPDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIF-- 178

Query: 181  DQNQALRLCLGSTSVGGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDA 240
            DQNQALRLCLGSTSVGGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDA
Sbjct: 179  DQNQALRLCLGSTSVGGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDA 238

Query: 241  HPPGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEP 300
            HPPGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEP
Sbjct: 239  HPPGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEP 298

Query: 301  LHSKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVA 360
            LHSKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVA
Sbjct: 299  LHSKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVA 358

Query: 361  VQNYVNPMLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTVVLLDS 420
            VQNYVNPMLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTVVLLDS
Sbjct: 359  VQNYVNPMLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTVVLLDS 418

Query: 421  VEKLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSY 480
            VEKLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSY
Sbjct: 419  VEKLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSY 478

Query: 481  GGQIFYLGTKSVYVMMLRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDASK 540
            GGQIFYLGTKSVYVMMLRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDASK
Sbjct: 479  GGQIFYLGTKSVYVMMLRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDASK 538

Query: 541  RKAIVADRMVEILFHYADRALKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLQRKDLLFSQ 600
            RKAIVADRMVEILFHYADRALKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLQRKDLLFSQ
Sbjct: 539  RKAIVADRMVEILFHYADRALKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLQRKDLLFSQ 598

Query: 601  MYDKLSENSVAKGVFLECLEPYILSDKLVGITPQVMKDLIVHFQDKKLMENVEALIVHMD 660
            MYDKLSENSVAKGVFLECLEPYILSDKLVGITPQVMKDLIVHFQDKKLMENVEALIVHMD
Sbjct: 599  MYDKLSENSVAKGVFLECLEPYILSDKLVGITPQVMKDLIVHFQDKKLMENVEALIVHMD 658

Query: 661  ITSLDIQQVVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFRVIAPPLNAGKTLTDEQVV 720
            ITSLDIQQVVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFRVIAPPLNAGKTLTDEQVV
Sbjct: 659  ITSLDIQQVVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFRVIAPPLNAGKTLTDEQVV 718

Query: 721  MGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASPEEEIYPYIRTL 780
            MGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASPEEEIYPYIRTL
Sbjct: 719  MGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASPEEEIYPYIRTL 778

Query: 781  LHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLAR 840
            LHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLAR
Sbjct: 779  LHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLAR 838

Query: 841  QLAKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMA 900
            QLAKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMA
Sbjct: 839  QLAKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMA 898

Query: 901  EKAEFYQICEFMYEREHQYDKIIDCYLRDPLREEEVFNYIHNILSIPGHSAEEKQSVWQK 960
            EKAEFYQICEFMYEREHQYDKIIDCYLRDPLREEEVFNYIHNILSIPGHSAEEKQSVWQK
Sbjct: 899  EKAEFYQICEFMYEREHQYDKIIDCYLRDPLREEEVFNYIHNILSIPGHSAEEKQSVWQK 958

Query: 961  AMDHIEELVSLKPCKAAELVATHFSGHIETVIKKLQNQVLLFKFLRSLLDPREGIHVNQE 1020
            AMDHIEELVSLKPCKAAELVATHFSGHIETVIKKLQNQVLLFKFLRSLLDPREGIHVNQE
Sbjct: 959  AMDHIEELVSLKPCKAAELVATHFSGHIETVIKKLQNQVLLFKFLRSLLDPREGIHVNQE 1018

Query: 1021 LLQISPCITEQFIELLCQFNPTQVIETLQVLECYRLEETIQITQKYQLHEVTAYLLEKKG 1080
            LLQISPCITEQFIELLCQFNPTQVIETLQVLECYRLEETIQITQKYQLHEVTAYLLEKKG
Sbjct: 1019 LLQISPCITEQFIELLCQFNPTQVIETLQVLECYRLEETIQITQKYQLHEVTAYLLEKKG 1078

Query: 1081 DIHGAFLIMLERLQSKLQEVTHQGENTKEDPSLKDVEDTMVETIALCQRNSHNLNQQQRE 1140
            DIHGAFLIMLERLQSKLQEVTHQGENTKEDPSLKDVEDTMVETIALCQRNSHNLNQQQRE
Sbjct: 1079 DIHGAFLIMLERLQSKLQEVTHQGENTKEDPSLKDVEDTMVETIALCQRNSHNLNQQQRE 1138

Query: 1141 ALWFPLLEAMMAPQKLSSSAIPHLHSEALKSLTMQVLNSMAAFIALPSILQRILQDPVYG 1200
            ALWFPLLEAMMAPQKLSSSAIPHLHSEALKSLTMQVLNSMAAFIALPSILQRILQDPVYG
Sbjct: 1139 ALWFPLLEAMMAPQKLSSSAIPHLHSEALKSLTMQVLNSMAAFIALPSILQRILQDPVYG 1198

Query: 1201 KGKLGEIQGLILGMLDTFNYEQTLLETTTSLLNQDLHWSLCNLRASVTRGLNPKQDYCSI 1260
            KGKLGEIQGLILGMLDTFNYEQTLLETTTSLLNQDLHWSLCNLRASVTRGLNPKQDYCSI
Sbjct: 1199 KGKLGEIQGLILGMLDTFNYEQTLLETTTSLLNQDLHWSLCNLRASVTRGLNPKQDYCSI 1258

Query: 1261 CLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTVEFEGQTRWTCYKCSSSNKVGKLSE 1320
            CLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTVEFEGQTRWTCYKCSSSNKVGKLSE
Sbjct: 1259 CLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTVEFEGQTRWTCYKCSSSNKVGKLSE 1318

Query: 1321 NSSEIKKGRITPSQVKMSPSYHQSKGDPTAKKGTSEPVLDPQQIQAFDQLCRLYRGSSRL 1380
            NSSEIKKGRITPSQVKMSPSYHQSKGDPTAKKGTSEPVLDPQQIQAFDQLCRLYRGSSRL
Sbjct: 1319 NSSEIKKGRITPSQVKMSPSYHQSKGDPTAKKGTSEPVLDPQQIQAFDQLCRLYRGSSRL 1378

Query: 1381 ALLTELSQNRSSESYRPFSGSQSAPAFNSIFQNENFQLQLIPPPVTED 1428
            ALLTELSQNRSSESYRPFSGSQSAPAFNSIFQNENFQLQLIPPPVTED
Sbjct: 1379 ALLTELSQNRSSESYRPFSGSQSAPAFNSIFQNENFQLQLIPPPVTED 1426


>gi|14149702 ring finger protein 167 [Homo sapiens]
          Length = 350

 Score = 40.8 bits (94), Expect = 0.009
 Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 10/74 (13%)

Query: 1256 DYCSICLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTVEFEGQTRWTCYKCSSSNKV 1315
            D C+ICL +Y    E  D++ V  C H YHS C+        +  QTR TC  C      
Sbjct: 228  DVCAICLDEY----EDGDKLRVLPCAHAYHSRCVD------PWLTQTRKTCPICKQPVHR 277

Query: 1316 GKLSENSSEIKKGR 1329
            G   E+  E  +G+
Sbjct: 278  GPGDEDQEEETQGQ 291


>gi|205830434 D4, zinc and double PHD fingers family 1 isoform c [Homo
            sapiens]
          Length = 332

 Score = 35.8 bits (81), Expect = 0.30
 Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 1/69 (1%)

Query: 1257 YCSICLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTVEFEGQTRWTCYKCSSSNKVG 1316
            YC  CL   K+     D I    CG   H  CLQ            RW C +C S +  G
Sbjct: 218  YCDFCLGGSKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCG 277

Query: 1317 KLSENSSEI 1325
              SEN  ++
Sbjct: 278  -TSENDDQL 285


>gi|205830430 D4, zinc and double PHD fingers family 1 isoform a [Homo
            sapiens]
          Length = 414

 Score = 35.8 bits (81), Expect = 0.30
 Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 1/69 (1%)

Query: 1257 YCSICLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTVEFEGQTRWTCYKCSSSNKVG 1316
            YC  CL   K+     D I    CG   H  CLQ            RW C +C S +  G
Sbjct: 300  YCDFCLGGSKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCG 359

Query: 1317 KLSENSSEI 1325
              SEN  ++
Sbjct: 360  -TSENDDQL 367


>gi|51599156 chromodomain helicase DNA binding protein 4 [Homo
            sapiens]
          Length = 1912

 Score = 35.4 bits (80), Expect = 0.40
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 10/70 (14%)

Query: 1255 QDYCSICLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTVEFEGQTRWTCYKCSSSNK 1314
            QDYC +C       Q+  + I+  +C   YH  CL   +  +E   + +W+C  C     
Sbjct: 370  QDYCEVC-------QQGGEIILCDTCPRAYHMVCL---DPDMEKAPEGKWSCPHCEKEGI 419

Query: 1315 VGKLSENSSE 1324
              +  E++SE
Sbjct: 420  QWEAKEDNSE 429


>gi|32189425 WD repeat domain 69 [Homo sapiens]
          Length = 415

 Score = 35.4 bits (80), Expect = 0.40
 Identities = 35/162 (21%), Positives = 60/162 (37%), Gaps = 32/162 (19%)

Query: 138 LKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFGKDQNQALRLCLGSTSVGG 197
           L+G SA+I+S +                I  G+     +++  D  + + + +G  +   
Sbjct: 215 LRGHSAEIISLSFNTSG---------DRIITGSFDHTVVVWDADTGRKVNILIGHCA--- 262

Query: 198 QYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDAHPPGTAILHIKFTDDPT 257
               IS+ S N DCS +L G       +WD  +GK + ++T               DD  
Sbjct: 263 ---EISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTG-------------HDDEI 306

Query: 258 LAICNDSGGSVFELT----FKRVMGVRTCESRCLFSGSKGEV 295
           L  C D  G +          R+    T +      G +GE+
Sbjct: 307 LDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEI 348


>gi|11545739 F-box and WD repeat domain containing 4 [Homo sapiens]
          Length = 412

 Score = 35.4 bits (80), Expect = 0.40
 Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 8/87 (9%)

Query: 201 AISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDAHPPGTAILHIKFTDDPTLAI 260
           AIS L  +       CG     + +WDL SG+L+  +    PPG  +L + +    TL  
Sbjct: 251 AISPLLSSFVTGTACCGHFS-PLRIWDLNSGQLMTHLGSDFPPGAGVLDVMYESPFTLLS 309

Query: 261 CNDSGGSVFELTFKRVMGVRTCESRCL 287
           C          T+ R   +RT   +C+
Sbjct: 310 CGYD-------TYVRYWDLRTSVRKCV 329


>gi|5729852 guanine nucleotide-binding protein, beta-5 subunit
           isoform a [Homo sapiens]
          Length = 353

 Score = 35.0 bits (79), Expect = 0.52
 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 7/82 (8%)

Query: 176 LIFGKDQNQALRLCLGSTSVGGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLR 235
           L F K++N A +      SV      +SA S  N   ++L     G   +WD+ SG+LL+
Sbjct: 134 LTFDKNENMAAK----KKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQ 189

Query: 236 SITDAHPPGTAILHIKFTDDPT 257
           S    H  G  +L +      T
Sbjct: 190 SF---HGHGADVLCLDLAPSET 208


>gi|20336270 guanine nucleotide-binding protein, beta-5 subunit
           isoform b [Homo sapiens]
          Length = 395

 Score = 35.0 bits (79), Expect = 0.52
 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 7/82 (8%)

Query: 176 LIFGKDQNQALRLCLGSTSVGGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLR 235
           L F K++N A +      SV      +SA S  N   ++L     G   +WD+ SG+LL+
Sbjct: 176 LTFDKNENMAAK----KKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQ 231

Query: 236 SITDAHPPGTAILHIKFTDDPT 257
           S    H  G  +L +      T
Sbjct: 232 SF---HGHGADVLCLDLAPSET 250


>gi|29788758 ring finger protein 130 [Homo sapiens]
          Length = 419

 Score = 35.0 bits (79), Expect = 0.52
 Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 7/47 (14%)

Query: 1252 NPKQDYCSICLQQYKRRQEMADEIIVFSCGHLYHSFCLQ---NKECT 1295
            +P  D+C++C++ YK+     D + +  C H++H  C+    ++ CT
Sbjct: 258  DPDFDHCAVCIESYKQN----DVVRILPCKHVFHKSCVDPWLSEHCT 300


>gi|205830432 D4, zinc and double PHD fingers family 1 isoform b [Homo
            sapiens]
          Length = 380

 Score = 34.7 bits (78), Expect = 0.67
 Identities = 25/76 (32%), Positives = 29/76 (38%), Gaps = 2/76 (2%)

Query: 1257 YCSICLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTVEFEGQTRWTCYKCSSSNKVG 1316
            YC  CL   K+     D I    CG   H  CLQ            RW C +C S +  G
Sbjct: 256  YCDFCLGGSKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCG 315

Query: 1317 KLSENSSEIKKGRITP 1332
              SEN      G +TP
Sbjct: 316  -TSENDGASWAG-LTP 329


>gi|21281677 WD repeat domain 36 [Homo sapiens]
          Length = 951

 Score = 34.3 bits (77), Expect = 0.88
 Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 9/105 (8%)

Query: 165 LIAVGTSHGLALIFGKDQNQALRLCLGSTSVGGQYGAISALSINNDCSRLLC-GFAKGQI 223
           ++A+G   G  +I     N+ L            +G I+++S   D   ++  G   G I
Sbjct: 261 VVAIGLMSGQVIIHNIKFNETLM------KFRQDWGPITSISFRTDGHPVMAAGSPCGHI 314

Query: 224 TMWDLASGKLLRSITDAHPPGTAILHIKFTDDPTLAICNDSGGSV 268
            +WDL   KL+  + +AH   TAI  + F     L + N +  ++
Sbjct: 315 GLWDLEDKKLINQMRNAH--STAIAGLTFLHREPLLVTNGADNAL 357


>gi|150170725 zinc and ring finger 4 [Homo sapiens]
          Length = 429

 Score = 34.3 bits (77), Expect = 0.88
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 9/57 (15%)

Query: 1256 DYCSICLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTVEFEGQTRWTCYKCSSS 1312
            D C+ICL +Y    E  D++ +  C H YH  C+        F    R +C  C  S
Sbjct: 307  DLCAICLDEY----EEGDQLKILPCSHTYHCKCID-----PWFSQAPRRSCPVCKQS 354


>gi|130484567 HFM1 protein [Homo sapiens]
          Length = 1435

 Score = 34.3 bits (77), Expect = 0.88
 Identities = 40/157 (25%), Positives = 62/157 (39%), Gaps = 18/157 (11%)

Query: 171  SHGLALIFGKDQNQALRLCLGSTSVGGQYGAISA------------LSINNDCSRLLCGF 218
            SH + LI G   NQ + L   + SV  + G+ +             LSIN   S  +   
Sbjct: 1026 SHYVTLIIGDADNQVVYLHKITDSVLLKAGSWAKKIAVKRALKSEDLSINLISSEFVGLD 1085

Query: 219  AKGQITMWDLASGKLLRSITDAHPPGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMG 278
             + ++T++ L   +    IT      T I H K +D  T+A  N         T  +  G
Sbjct: 1086 IQQKLTVFYLEPKRFGNQITMQRKSETQISHSKHSDISTIAGPNKG------TTASKKPG 1139

Query: 279  VRTCESRCLFSGSKGEVCCIEPLHSKPELKDHPITQF 315
             R C   C    + G  CC   +  K E+K+  I+ +
Sbjct: 1140 NRECNHLCKSKHTCGHDCCKIGVAQKSEIKESTISSY 1176


>gi|21040269 ring finger protein 133 [Homo sapiens]
          Length = 376

 Score = 33.9 bits (76), Expect = 1.2
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 4/39 (10%)

Query: 1251 LNPKQDYCSICLQQYKRRQEMADEIIVFSCGHLYHSFCL 1289
            +NP  D C IC ++YK      D + + +C H +H  C+
Sbjct: 249  INPNGDSCVICFERYKPN----DIVRILTCKHFFHKNCI 283


>gi|16554629 WD repeat domain 5 [Homo sapiens]
          Length = 334

 Score = 33.5 bits (75), Expect = 1.5
 Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 12/99 (12%)

Query: 202 ISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDAHPPGTAILHIKFTDDPTLAIC 261
           +SA+  N D S ++     G   +WD ASG+ L+++ D   P  + +         LA  
Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 233

Query: 262 NDSGGSVFELTFKRVMGVRTCESRCL--FSGSKGEVCCI 298
            D+   +++ +          + +CL  ++G K E  CI
Sbjct: 234 LDNTLKLWDYS----------KGKCLKTYTGHKNEKYCI 262


>gi|16554627 WD repeat domain 5 [Homo sapiens]
          Length = 334

 Score = 33.5 bits (75), Expect = 1.5
 Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 12/99 (12%)

Query: 202 ISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDAHPPGTAILHIKFTDDPTLAIC 261
           +SA+  N D S ++     G   +WD ASG+ L+++ D   P  + +         LA  
Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 233

Query: 262 NDSGGSVFELTFKRVMGVRTCESRCL--FSGSKGEVCCI 298
            D+   +++ +          + +CL  ++G K E  CI
Sbjct: 234 LDNTLKLWDYS----------KGKCLKTYTGHKNEKYCI 262


>gi|24308089 chromodomain helicase DNA binding protein 5 [Homo
            sapiens]
          Length = 1954

 Score = 33.5 bits (75), Expect = 1.5
 Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 10/74 (13%)

Query: 1255 QDYCSICLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTVEFEGQTRWTCYKCSSSNK 1314
            QDYC +C       Q+  + I+  +C   YH  CL  +   +E   + +W+C  C     
Sbjct: 343  QDYCEVC-------QQGGEIILCDTCPRAYHLVCLDPE---LEKAPEGKWSCPHCEKEGI 392

Query: 1315 VGKLSENSSEIKKG 1328
              +  ++  E ++G
Sbjct: 393  QWEPKDDDDEEEEG 406


>gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens]
          Length = 1317

 Score = 33.5 bits (75), Expect = 1.5
 Identities = 21/68 (30%), Positives = 34/68 (50%)

Query: 405 INFTWINSRTVVLLDSVEKLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQA 464
           I FT     + +  ++V K+H++D    E  +    + V+L    +  KSL T GNV  A
Sbjct: 229 IKFTQAKFDSEMPCETVSKIHLVDLAGSERADATGATGVRLKEGGNINKSLVTLGNVISA 288

Query: 465 LALVGEKA 472
           LA + + A
Sbjct: 289 LADLSQDA 296


>gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens]
          Length = 428

 Score = 33.1 bits (74), Expect = 2.0
 Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 4/39 (10%)

Query: 1251 LNPKQDYCSICLQQYKRRQEMADEIIVFSCGHLYHSFCL 1289
            + P  D C++C++ YK      D + + +C H++H  C+
Sbjct: 270  IGPDGDSCAVCIELYKPN----DLVRILTCNHIFHKTCV 304


>gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens]
          Length = 402

 Score = 33.1 bits (74), Expect = 2.0
 Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 4/39 (10%)

Query: 1251 LNPKQDYCSICLQQYKRRQEMADEIIVFSCGHLYHSFCL 1289
            + P  D C++C++ YK      D + + +C H++H  C+
Sbjct: 244  IGPDGDSCAVCIELYKPN----DLVRILTCNHIFHKTCV 278


>gi|34577087 ring finger protein 13 [Homo sapiens]
          Length = 381

 Score = 33.1 bits (74), Expect = 2.0
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 10/54 (18%)

Query: 1256 DYCSICLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTVEFEGQTRWTCYKC 1309
            D C+ICL +Y    E  D++ +  C H YH       +C   +  +T+ TC  C
Sbjct: 238  DVCAICLDEY----EDGDKLRILPCSHAYHC------KCVDPWLTKTKKTCPVC 281


>gi|6005864 ring finger protein 13 [Homo sapiens]
          Length = 381

 Score = 33.1 bits (74), Expect = 2.0
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 10/54 (18%)

Query: 1256 DYCSICLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTVEFEGQTRWTCYKC 1309
            D C+ICL +Y    E  D++ +  C H YH       +C   +  +T+ TC  C
Sbjct: 238  DVCAICLDEY----EDGDKLRILPCSHAYHC------KCVDPWLTKTKKTCPVC 281


>gi|83779014 katanin p80 subunit B 1 [Homo sapiens]
          Length = 655

 Score = 32.7 bits (73), Expect = 2.6
 Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 14/113 (12%)

Query: 145 IVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFGKDQNQALRLCLGST----SVGGQYG 200
           +   A K+   +  A  VSSL+ +G + G  L  G D  +     +       S+ G   
Sbjct: 6   VTKTAWKLQEIVAHASNVSSLV-LGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTS 64

Query: 201 AISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSI---------TDAHPPG 244
            + ++ +N     ++ G   G I +WDL + K+LR++          D HP G
Sbjct: 65  PVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG 117


>gi|52630326 chromodomain helicase DNA binding protein 3 isoform 1
            [Homo sapiens]
          Length = 2000

 Score = 32.7 bits (73), Expect = 2.6
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 10/73 (13%)

Query: 1255 QDYCSICLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTVEFEGQTRWTCYKCSSSNK 1314
            QDYC +C       Q+  + I+  +C   YH  CL  +   ++   + +W+C  C     
Sbjct: 379  QDYCEVC-------QQGGEIILCDTCPRAYHLVCLDPE---LDRAPEGKWSCPHCEKEGV 428

Query: 1315 VGKLSENSSEIKK 1327
              +  E   E ++
Sbjct: 429  QWEAKEEEEEYEE 441


>gi|52630322 chromodomain helicase DNA binding protein 3 isoform 2
            [Homo sapiens]
          Length = 1966

 Score = 32.7 bits (73), Expect = 2.6
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 10/73 (13%)

Query: 1255 QDYCSICLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTVEFEGQTRWTCYKCSSSNK 1314
            QDYC +C       Q+  + I+  +C   YH  CL  +   ++   + +W+C  C     
Sbjct: 379  QDYCEVC-------QQGGEIILCDTCPRAYHLVCLDPE---LDRAPEGKWSCPHCEKEGV 428

Query: 1315 VGKLSENSSEIKK 1327
              +  E   E ++
Sbjct: 429  QWEAKEEEEEYEE 441


>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
            [Homo sapiens]
          Length = 2059

 Score = 32.7 bits (73), Expect = 2.6
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 10/73 (13%)

Query: 1255 QDYCSICLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTVEFEGQTRWTCYKCSSSNK 1314
            QDYC +C       Q+  + I+  +C   YH  CL  +   ++   + +W+C  C     
Sbjct: 438  QDYCEVC-------QQGGEIILCDTCPRAYHLVCLDPE---LDRAPEGKWSCPHCEKEGV 487

Query: 1315 VGKLSENSSEIKK 1327
              +  E   E ++
Sbjct: 488  QWEAKEEEEEYEE 500


>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
            sapiens]
          Length = 4911

 Score = 32.3 bits (72), Expect = 3.3
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 4/64 (6%)

Query: 1258 CSICLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTVEFEGQTRWTCYKCSSSNKVGK 1317
            C +C Q  K+  E +  ++  +C   YH+FCLQ    +V   G   W C  C    + G 
Sbjct: 388  CKVC-QNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNG---WKCKNCRICIECGT 443

Query: 1318 LSEN 1321
             S +
Sbjct: 444  RSSS 447


>gi|110815834 F-box and WD-40 domain protein 10 [Homo sapiens]
          Length = 1051

 Score = 32.3 bits (72), Expect = 3.3
 Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 14/103 (13%)

Query: 196 GGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDAHPPGTAILHIKFTDD 255
           GG  G I+ + +  +  RL+ G    Q+ +WD+ +GK L++     P    IL  +  D 
Sbjct: 492 GGHQGTITCMDLCKN--RLVSGGRDCQVKVWDVDTGKCLKTFRHKDP----ILATRINDT 545

Query: 256 PTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCI 298
             ++ C      V+ +   ++  V+T       SG +G V C+
Sbjct: 546 YIVSSCERGLVKVWHIAMAQL--VKT------LSGHEGAVKCL 580


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.135    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,069,452
Number of Sequences: 37866
Number of extensions: 2246228
Number of successful extensions: 6285
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 6225
Number of HSP's gapped (non-prelim): 92
length of query: 1428
length of database: 18,247,518
effective HSP length: 115
effective length of query: 1313
effective length of database: 13,892,928
effective search space: 18241414464
effective search space used: 18241414464
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.