Guide to the Human Genome
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Name: KIF16B Sequence: fasta or formatted (1317aa) NCBI GI: 41327691
Description:

kinesin-like motor protein C20orf23

Referenced in:

Kinesins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         75           2
 C cysteine            0.8         10           1
 D aspartate           4.7         62           3
 E glutamate          12.7        167           3
 F phenylalanine       3.3         43           2
 G glycine             4.9         64           2
 H histidine           2.1         28           2
 I isoleucine          4.8         63           2
 K lysine              8.7        115           3
 L leucine            11.5        151           2
 M methionine          1.9         25           2
 N asparagine          3.9         51           3
 P proline             2.1         28           2
 Q glutamine           6.3         83           2
 R arginine            6.9         91           2
 S serine              6.5         85           3
 T threonine           5.2         68           2
 V valine              5.4         71           2
 W tryptophan          0.5          6           1
 Y tyrosine            2.4         31           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kinesin-like motor protein C20orf23 
KIF1B                 0.205   kinesin family member 1B isoform b 
KIF1A                 0.203   axonal transport of synaptic vesicles 
KIF1B                 0.200   kinesin family member 1B isoform alpha 
KIF1C                 0.187   kinesin family member 1C 
KIF14                 0.186   kinesin family member 14 
STARD9                0.185   PREDICTED: StAR-related lipid transfer (START) doma...
STARD9                0.185   PREDICTED: StAR-related lipid transfer (START) doma...
STARD9                0.185   PREDICTED: StAR-related lipid transfer (START) doma...
KIF13B                0.182   kinesin family member 13B 
KIF13A                0.179   kinesin family member 13A isoform d 
KIF13A                0.179   kinesin family member 13A isoform c 
KIF13A                0.179   kinesin family member 13A isoform b 
KIF13A                0.179   kinesin family member 13A isoform a 
KIF4A                 0.113   kinesin family member 4 
KIF4B                 0.112   kinesin family member 4B 
KIF27                 0.110   kinesin family member 27 
KIF3A                 0.110   kinesin family member 3A 
KIF17                 0.106   kinesin family member 17 isoform b 
KIF17                 0.106   kinesin family member 17 isoform a 
CENPE                 0.105   centromere protein E 
KIF3B                 0.104   kinesin family member 3B 
KIF15                 0.103   kinesin family member 15 
KIF21B                0.102   kinesin family member 21B 
KIF21A                0.097   kinesin family member 21A 
KIF3C                 0.094   kinesin family member 3C 
KIF5C                 0.092   kinesin family member 5C 
KIF11                 0.091   kinesin family member 11 
KIF5A                 0.090   kinesin family member 5A 
KIF18B                0.088   kinesin family member 18B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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