Guide to the Human Genome
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Name: FBXW4 Sequence: fasta or formatted (412aa) NCBI GI: 11545739
Description:

F-box and WD repeat domain containing 4

Referenced in:

Cullins and SCF Complexes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         32           4
 C cysteine            3.9         16           2
 D aspartate           5.1         21           2
 E glutamate           5.1         21           7
 F phenylalanine       3.2         13           1
 G glycine             7.0         29           2
 H histidine           3.4         14           1
 I isoleucine          3.6         15           2
 K lysine              2.4         10           1
 L leucine            12.4         51           4
 M methionine          1.9          8           1
 N asparagine          2.4         10           1
 P proline             4.4         18           2
 Q glutamine           3.2         13           1
 R arginine            8.0         33           2
 S serine              8.5         35           2
 T threonine           5.3         22           2
 V valine              6.1         25           2
 W tryptophan          2.9         12           1
 Y tyrosine            3.4         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-box and WD repeat domain containing 4 
FBXW7                 0.060   F-box and WD repeat domain containing 7 isoform 3 [H...
FBXW7                 0.060   F-box and WD repeat domain containing 7 isoform 1 [H...
FBXW7                 0.060   F-box and WD repeat domain containing 7 isoform 2 [H...
PLRG1                 0.041   pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [...
PRPF4                 0.038   PRP4 pre-mRNA processing factor 4 homolog 
WDR5B                 0.036   WD repeat domain 5B 
GNB5                  0.036   guanine nucleotide-binding protein, beta-5 subunit is...
GNB5                  0.036   guanine nucleotide-binding protein, beta-5 subunit i...
GNB1                  0.034   guanine nucleotide-binding protein, beta-1 subunit [...
WDR5                  0.032   WD repeat domain 5 
WDR5                  0.032   WD repeat domain 5 
PAFAH1B1              0.032   platelet-activating factor acetylhydrolase, isoform I...
GNB2L1                0.030   guanine nucleotide binding protein (G protein), beta ...
FBXW10                0.030   F-box and WD-40 domain protein 10 
CDRT1                 0.030   CMT1A duplicated region transcript 1 
WDR38                 0.030   WD repeat domain 38 
TBL3                  0.029   transducin beta-like 3 
TRAF7                 0.029   TNF receptor-associated factor 7 
WDR48                 0.029   WD repeat domain 48 
RBBP7                 0.029   retinoblastoma binding protein 7 
GNB4                  0.028   guanine nucleotide-binding protein, beta-4 subunit [...
FBXW11                0.026   F-box and WD repeat domain containing 11 isoform C [...
FBXW11                0.026   F-box and WD repeat domain containing 11 isoform A [...
FBXW11                0.026   F-box and WD repeat domain containing 11 isoform B [...
WDR17                 0.026   WD repeat domain 17 isoform 2 
WDR17                 0.026   WD repeat domain 17 isoform 1 
WDR86                 0.026   WD repeat domain 86 
RBBP4                 0.025   retinoblastoma binding protein 4 isoform c 
RBBP4                 0.025   retinoblastoma binding protein 4 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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