Search of human proteins with 57528117

Search of human proteins with 57528117

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|57528117 SPANX family, member N4 [Homo sapiens]
         (99 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|57528117 SPANX family, member N4 [Homo sapiens]                    204   9e-54
gi|58801563 SPANX-N3 protein [Homo sapiens]                           100   4e-22
gi|57634514 SPANX-N2 protein [Homo sapiens]                            92   9e-20
gi|57528121 SPANX-N1 protein [Homo sapiens]                            69   8e-13
gi|57528144 SPANX family, member N5 [Homo sapiens]                     65   2e-11
gi|125656165 THO complex 2 [Homo sapiens]                              34   0.022
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]     33   0.037
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi...    33   0.049
gi|214831834 transmembrane protein 169 [Homo sapiens]                  32   0.11 
gi|19923913 transmembrane protein 169 [Homo sapiens]                   32   0.11 
gi|214831799 transmembrane protein 169 [Homo sapiens]                  32   0.11 
gi|214831780 transmembrane protein 169 [Homo sapiens]                  32   0.11 
gi|29244924 chromodomain helicase DNA binding protein 6 [Homo sa...    32   0.11 
gi|109637763 calpastatin isoform h [Homo sapiens]                      31   0.19 
gi|109637757 calpastatin isoform e [Homo sapiens]                      31   0.19 
gi|4885377 histone cluster 1, H1d [Homo sapiens]                       31   0.19 
gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo...    31   0.19 
gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo...    31   0.19 
gi|116235478 establishment of cohesion 1 homolog 1 [Homo sapiens]      30   0.32 
gi|29789008 Huntingtin interacting protein C isoform 2 [Homo sap...    30   0.32 
gi|72534686 Huntingtin interacting protein C isoform 1 [Homo sap...    30   0.32 
gi|109637761 calpastatin isoform g [Homo sapiens]                      30   0.41 
gi|195963316 PWWP domain containing 2A isoform b [Homo sapiens]        30   0.54 
gi|153791982 PWWP domain containing 2A isoform a [Homo sapiens]        30   0.54 
gi|238624188 diffuse panbronchiolitis critical region 1 protein ...    29   0.70 
gi|113425145 PREDICTED: similar to Golgin subfamily A member 8-l...    29   0.70 
gi|113425137 PREDICTED: similar to Golgin subfamily A member 8-l...    29   0.70 
gi|113425121 PREDICTED: similar to Golgin subfamily A member 8-l...    29   0.70 
gi|239740773 PREDICTED: similar to diffuse panbronchiolitis crit...    29   0.70 
gi|116805348 trinucleotide repeat containing 6A [Homo sapiens]         29   0.70 

>gi|57528117 SPANX family, member N4 [Homo sapiens]
          Length = 99

 Score =  204 bits (520), Expect = 9e-54
 Identities = 99/99 (100%), Positives = 99/99 (100%)

Query: 1  MEEPTSSTNENKMKSPCESNKRKVDKKKKNLHRASAPEQSLKETEKAKYPTLVFYCRKNK 60
          MEEPTSSTNENKMKSPCESNKRKVDKKKKNLHRASAPEQSLKETEKAKYPTLVFYCRKNK
Sbjct: 1  MEEPTSSTNENKMKSPCESNKRKVDKKKKNLHRASAPEQSLKETEKAKYPTLVFYCRKNK 60

Query: 61 KRNSNQLENNQPTESSTDPIKEKGDLDISAGSPQDGGQN 99
          KRNSNQLENNQPTESSTDPIKEKGDLDISAGSPQDGGQN
Sbjct: 61 KRNSNQLENNQPTESSTDPIKEKGDLDISAGSPQDGGQN 99


>gi|58801563 SPANX-N3 protein [Homo sapiens]
          Length = 141

 Score = 99.8 bits (247), Expect = 4e-22
 Identities = 52/98 (53%), Positives = 72/98 (73%), Gaps = 3/98 (3%)

Query: 1  MEEPTSSTNENKMKSPCESNKRKVDKKKKNLHRASAPEQSLKETEKAKYPTL-VFYCRKN 59
          ME+PTSSTN  K KSPCESN +K D+ ++  +R  APEQSLK+T+ ++YP + V+Y RK 
Sbjct: 1  MEQPTSSTNGEKTKSPCESNNKKNDEMQEVPNRVLAPEQSLKKTKTSEYPIIFVYYLRKG 60

Query: 60 KKRNSNQLENNQPTESSTDPIKEKGD--LDISAGSPQD 95
          KK NSNQLEN Q  E+S +PI+++ D  +D+S GS  +
Sbjct: 61 KKINSNQLENEQSQENSINPIQKEEDEGVDLSEGSSNE 98


>gi|57634514 SPANX-N2 protein [Homo sapiens]
          Length = 180

 Score = 92.0 bits (227), Expect = 9e-20
 Identities = 49/98 (50%), Positives = 71/98 (72%), Gaps = 3/98 (3%)

Query: 1  MEEPTSSTNENKMKSPCESNKRKVDKKKKNLHRASAPEQSLKETEKAKYPT-LVFYCRKN 59
          ME+PTSSTN  K KSPCESN +K D+ ++  +R  AP+QSL++T+  +Y T +V+Y RK+
Sbjct: 1  MEQPTSSTNGEKRKSPCESNNKKNDEMQEAPNRVLAPKQSLQKTKTIEYLTIIVYYYRKH 60

Query: 60 KKRNSNQLENNQPTESSTDPIKEKGD--LDISAGSPQD 95
           K NSNQLE +Q  E+S +P++E+ D  LD + GS Q+
Sbjct: 61 TKINSNQLEKDQSRENSINPVQEEEDEGLDSAEGSSQE 98



 Score = 27.3 bits (59), Expect = 2.7
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 3/37 (8%)

Query: 63  NSNQLENNQPTESSTDPIKEKGDLDISAGSPQDGGQN 99
           +S + E+  P E S+   +E  DLD S GS Q+GG++
Sbjct: 147 SSQEDEDLDPPEGSS---QEDEDLDSSEGSSQEGGED 180


>gi|57528121 SPANX-N1 protein [Homo sapiens]
          Length = 72

 Score = 68.9 bits (167), Expect = 8e-13
 Identities = 37/72 (51%), Positives = 51/72 (70%), Gaps = 2/72 (2%)

Query: 1  MEEPTSSTNENKMKSPCESNKRKVDKKKKNLHRASAPEQSLKETEKAKYPTLVFYC-RKN 59
          ME+PTSS N  K KSPCESN    D+ ++  +R  APE SLK+ + ++Y T++ +C RK 
Sbjct: 1  MEQPTSSINGEKRKSPCESNNEN-DEMQETPNRDLAPEPSLKKMKTSEYSTVLAFCYRKA 59

Query: 60 KKRNSNQLENNQ 71
          KK +SNQLEN+Q
Sbjct: 60 KKIHSNQLENDQ 71


>gi|57528144 SPANX family, member N5 [Homo sapiens]
          Length = 72

 Score = 64.7 bits (156), Expect = 2e-11
 Identities = 36/72 (50%), Positives = 50/72 (69%), Gaps = 2/72 (2%)

Query: 1  MEEPTSSTNENKMKSPCESNKRKVDKKKKNLHRASAPEQSLKETEKAKYPTLVFYC-RKN 59
          ME+PTSSTN  K KSPC+SN  K D+ ++  +R    E SLK+ + ++Y T++  C RK 
Sbjct: 1  MEKPTSSTNGEKRKSPCDSNS-KNDEMQETPNRDLVLEPSLKKMKTSEYSTVLVLCYRKT 59

Query: 60 KKRNSNQLENNQ 71
          KK +SNQLEN+Q
Sbjct: 60 KKIHSNQLENDQ 71


>gi|125656165 THO complex 2 [Homo sapiens]
          Length = 1593

 Score = 34.3 bits (77), Expect = 0.022
 Identities = 18/75 (24%), Positives = 35/75 (46%)

Query: 2    EEPTSSTNENKMKSPCESNKRKVDKKKKNLHRASAPEQSLKETEKAKYPTLVFYCRKNKK 61
            E  T   +++K +SPCES       K+KN  ++S  E+     +  K   +    +K  +
Sbjct: 1503 ENGTMGVSKHKSESPCESPYPNEKDKEKNKSKSSGKEKGSDSFKSEKMDKISSGGKKESR 1562

Query: 62   RNSNQLENNQPTESS 76
             +  ++E  +  +SS
Sbjct: 1563 HDKEKIEKKEKRDSS 1577


>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
          Length = 1020

 Score = 33.5 bits (75), Expect = 0.037
 Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 1/92 (1%)

Query: 2   EEPTSSTNENKMKSPCESNKRKVDKKKKNLHRASAPEQSLKETEKAKYPTLVFYCRKNKK 61
           + P  + +  K KSP +   +   + K  +   +     +K  EKAK PT     +  +K
Sbjct: 593 KSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKE-EAKSPEK 651

Query: 62  RNSNQLENNQPTESSTDPIKEKGDLDISAGSP 93
             S + E  +  E +  P+K +      A SP
Sbjct: 652 AKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSP 683



 Score = 32.3 bits (72), Expect = 0.083
 Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 9/100 (9%)

Query: 3   EPTSSTNENKMKSPCESNKRKVDKKK-------KNLHRASAP-EQSLKETEKAKYPTLVF 54
           E   + +  K KSP ++  +  +K K       K+  +A +P ++  K  EKAK P    
Sbjct: 656 EKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKE- 714

Query: 55  YCRKNKKRNSNQLENNQPTESSTDPIKEKGDLDISAGSPQ 94
             +  +K  S   E  +  E +  P+KE+      A SP+
Sbjct: 715 EAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPE 754



 Score = 32.0 bits (71), Expect = 0.11
 Identities = 25/90 (27%), Positives = 34/90 (37%), Gaps = 3/90 (3%)

Query: 7   STNENKMKSPCESNKRKVDKKKKNLHRASAPEQSLKETEKAKYPTLVFYCRKNK---KRN 63
           S  + + KSP E    +  K        S PE    E E+AK P  V    K K   K  
Sbjct: 532 SPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEE 591

Query: 64  SNQLENNQPTESSTDPIKEKGDLDISAGSP 93
           +      +  E +  P+KE+      A SP
Sbjct: 592 AKSPAEAKSPEKAKSPVKEEAKSPAEAKSP 621



 Score = 31.6 bits (70), Expect = 0.14
 Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 9/100 (9%)

Query: 2   EEPTSSTNENKMKSPCESNKRKVDKKKK-NLHRASAPEQS-------LKETEKAKYPTLV 53
           + P    +  K KSP +   +  +K K      A +PE++        K  EKAK P   
Sbjct: 627 KSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKA 686

Query: 54  FYCRKNKKRNSNQLENNQPTESSTDPIKEKGDLDISAGSP 93
              +  +K  S   E  +  E +  P+KE+      A SP
Sbjct: 687 -EAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSP 725



 Score = 30.0 bits (66), Expect = 0.41
 Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 12/105 (11%)

Query: 2   EEPTSSTNENKMKSPCESNKRKVDKKKKNLHRASAPEQS-------LKETEKAKYPTLVF 54
           EE T S    +  SP +  K  V ++ K+   A +PE+        +K  EKAK P    
Sbjct: 498 EEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEE 557

Query: 55  YCRKNKKRNSNQLENNQPT-----ESSTDPIKEKGDLDISAGSPQ 94
                + ++  + E   P      E +  P KE+      A SP+
Sbjct: 558 AKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPE 602



 Score = 28.9 bits (63), Expect = 0.92
 Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 8/90 (8%)

Query: 2    EEPTSSTNENKMKSPCESNKRKVDKKKKNLHRASAPEQSLKETEKAKYPTLVF------- 54
            +EP  +  +   K P E  +   +KK     +A  PE+  K   KAK             
Sbjct: 931  KEPDDAKAKEPSK-PAEKKEAAPEKKDTKEEKAKKPEEKPKTEAKAKEDDKTLSKEPSKP 989

Query: 55   YCRKNKKRNSNQLENNQPTESSTDPIKEKG 84
               K +K +S   ++++P E +T+    KG
Sbjct: 990  KAEKAEKSSSTDQKDSKPPEKATEDKAAKG 1019



 Score = 26.2 bits (56), Expect = 6.0
 Identities = 19/82 (23%), Positives = 33/82 (40%)

Query: 12  KMKSPCESNKRKVDKKKKNLHRASAPEQSLKETEKAKYPTLVFYCRKNKKRNSNQLENNQ 71
           K KSP +   +  +K K  +   +   +  K  EKAK   +     K   +   +   ++
Sbjct: 721 KAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADK 780

Query: 72  PTESSTDPIKEKGDLDISAGSP 93
             E +  P+KE+      A SP
Sbjct: 781 FPEKAKSPVKEEVKSPEKAKSP 802


>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
          sapiens]
          Length = 123

 Score = 33.1 bits (74), Expect = 0.049
 Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 6/81 (7%)

Query: 3  EPTSSTNENKMKSPCESNKRKVDKKKKNLHRASAPEQSLKETEKAKYPTLVFYCRKNKKR 62
          E T  T E + K      KRK  +K+K        ++  KETEK K        RK K++
Sbjct: 14 EETEETEEEEEKEGKRKEKRKEKRKEKE------KKKKTKETEKRKEKEEEEKKRKRKRK 67

Query: 63 NSNQLENNQPTESSTDPIKEK 83
             + E  +  E   +  KE+
Sbjct: 68 KKKEEEEREEEEEEEEEEKEE 88


>gi|214831834 transmembrane protein 169 [Homo sapiens]
          Length = 297

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 4/85 (4%)

Query: 1  MEEPTSSTNENKMKSPCESNKRKVDKKKKNLHRASAPEQSLKETEKAKYPTLVFYCRKNK 60
          MEEPT+   + ++ SP + + RK       L   S      K+ ++++  +++ Y   N+
Sbjct: 1  MEEPTAVEGQVQLPSPHQGSLRKAVAAALALDGESTMGHRKKKRKESRPESIIIYRSDNE 60

Query: 61 KRNSNQLENNQPTESSTDPIKEKGD 85
          K +    E    +E    P +E+GD
Sbjct: 61 KTD----EEPGESEGGDQPKEEEGD 81


>gi|19923913 transmembrane protein 169 [Homo sapiens]
          Length = 297

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 4/85 (4%)

Query: 1  MEEPTSSTNENKMKSPCESNKRKVDKKKKNLHRASAPEQSLKETEKAKYPTLVFYCRKNK 60
          MEEPT+   + ++ SP + + RK       L   S      K+ ++++  +++ Y   N+
Sbjct: 1  MEEPTAVEGQVQLPSPHQGSLRKAVAAALALDGESTMGHRKKKRKESRPESIIIYRSDNE 60

Query: 61 KRNSNQLENNQPTESSTDPIKEKGD 85
          K +    E    +E    P +E+GD
Sbjct: 61 KTD----EEPGESEGGDQPKEEEGD 81


>gi|214831799 transmembrane protein 169 [Homo sapiens]
          Length = 297

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 4/85 (4%)

Query: 1  MEEPTSSTNENKMKSPCESNKRKVDKKKKNLHRASAPEQSLKETEKAKYPTLVFYCRKNK 60
          MEEPT+   + ++ SP + + RK       L   S      K+ ++++  +++ Y   N+
Sbjct: 1  MEEPTAVEGQVQLPSPHQGSLRKAVAAALALDGESTMGHRKKKRKESRPESIIIYRSDNE 60

Query: 61 KRNSNQLENNQPTESSTDPIKEKGD 85
          K +    E    +E    P +E+GD
Sbjct: 61 KTD----EEPGESEGGDQPKEEEGD 81


>gi|214831780 transmembrane protein 169 [Homo sapiens]
          Length = 297

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 4/85 (4%)

Query: 1  MEEPTSSTNENKMKSPCESNKRKVDKKKKNLHRASAPEQSLKETEKAKYPTLVFYCRKNK 60
          MEEPT+   + ++ SP + + RK       L   S      K+ ++++  +++ Y   N+
Sbjct: 1  MEEPTAVEGQVQLPSPHQGSLRKAVAAALALDGESTMGHRKKKRKESRPESIIIYRSDNE 60

Query: 61 KRNSNQLENNQPTESSTDPIKEKGD 85
          K +    E    +E    P +E+GD
Sbjct: 61 KTD----EEPGESEGGDQPKEEEGD 81


>gi|29244924 chromodomain helicase DNA binding protein 6 [Homo
           sapiens]
          Length = 2715

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 19/78 (24%), Positives = 41/78 (52%), Gaps = 1/78 (1%)

Query: 2   EEPTSSTNENKMKSPCESNKRKVDKKKKNLHRASAPEQSLKETEKAKYPTLVFYCRKNKK 61
           +EP       K + P E++  K  K+K++   ++A  +S ++  K + PT V   +K K+
Sbjct: 143 KEPKQKDGAKKARKPREASGTKEAKEKRSCTDSAARTKS-RKASKEQGPTPVEKKKKGKR 201

Query: 62  RNSNQLENNQPTESSTDP 79
           ++   +E+ +  +  T+P
Sbjct: 202 KSETTVESLELDQGLTNP 219



 Score = 27.7 bits (60), Expect = 2.0
 Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 5/82 (6%)

Query: 3   EPTSSTNENKMKSPCESNKRKVDKKKKNLHRASAPEQSLKETEKAKYPTLVFYCRKNKKR 62
           EP       K K P ++ + K  K+K    +A  P ++    E  +  +      + K R
Sbjct: 123 EPKEPKEPRKAKEPKKAKEHKEPKQKDGAKKARKPREASGTKEAKEKRSCTDSAARTKSR 182

Query: 63  NSNQLENNQPTESSTDPIKEKG 84
            +++ +   P E      K+KG
Sbjct: 183 KASKEQGPTPVEK-----KKKG 199


>gi|109637763 calpastatin isoform h [Homo sapiens]
          Length = 769

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 12/104 (11%)

Query: 5   TSSTNENKMKSPCESNKRKVDKKKKN-------LHRASAPEQSLKE-TEKAKYPTLVFYC 56
           + +T+++   +P E+   K + +KK+       +H   + E   KE TE    P      
Sbjct: 75  SGATSKSSSMNPTETKAVKTEPEKKSQSTKLSVVHEKKSQEGKPKEHTEPKSLPKQASDT 134

Query: 57  RKNKKRNSNQLENN---QPTESSTDPIKEKGDLDISAGSPQDGG 97
             N   N   +  +   QP+E ST+P  +  D+ ISAG     G
Sbjct: 135 GSNDAHNKKAVSRSAEQQPSEKSTEPKTKPQDM-ISAGGESVAG 177


>gi|109637757 calpastatin isoform e [Homo sapiens]
          Length = 756

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 12/104 (11%)

Query: 5   TSSTNENKMKSPCESNKRKVDKKKKN-------LHRASAPEQSLKE-TEKAKYPTLVFYC 56
           + +T+++   +P E+   K + +KK+       +H   + E   KE TE    P      
Sbjct: 75  SGATSKSSSMNPTETKAVKTEPEKKSQSTKLSVVHEKKSQEGKPKEHTEPKSLPKQASDT 134

Query: 57  RKNKKRNSNQLENN---QPTESSTDPIKEKGDLDISAGSPQDGG 97
             N   N   +  +   QP+E ST+P  +  D+ ISAG     G
Sbjct: 135 GSNDAHNKKAVSRSAEQQPSEKSTEPKTKPQDM-ISAGGESVAG 177


>gi|4885377 histone cluster 1, H1d [Homo sapiens]
          Length = 221

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 6/99 (6%)

Query: 2   EEPTSSTNENKMKSPCESNKRK---VDKKKKNLHRASAPEQSLKET-EKAKYPTLVFYCR 57
           ++  S   + K K    +  RK     KK K +  A+ P++S+K+T +K K P      +
Sbjct: 110 KKAASGEGKPKAKKAGAAKPRKPAGAAKKPKKVAGAATPKKSIKKTPKKVKKPATAAGTK 169

Query: 58  KNKKRNSNQLENNQPTESSTDPIKEKGDLDISAGSPQDG 96
           K  K ++ +++  QP +++  P K K      A  P+ G
Sbjct: 170 KVAK-SAKKVKTPQPKKAAKSPAKAKAPKP-KAAKPKSG 206


>gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo
           sapiens]
          Length = 1272

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 7/84 (8%)

Query: 2   EEPTSSTNENKMKSPCESNKRKVDK--KKKNLHRASAPEQSLKETEKAKYPTLVFYCRKN 59
           ++  S   E+K K   +  ++K DK  KKK+  +  A E+S K+ E+ K      +  + 
Sbjct: 46  KKEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKK----HQEEE 101

Query: 60  KKRNSNQLENNQPTESSTDPIKEK 83
           +K+   Q +  Q  E++   +KEK
Sbjct: 102 RKKQEEQAKRQQEEEAAAQ-MKEK 124


>gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo
           sapiens]
          Length = 1272

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 7/84 (8%)

Query: 2   EEPTSSTNENKMKSPCESNKRKVDK--KKKNLHRASAPEQSLKETEKAKYPTLVFYCRKN 59
           ++  S   E+K K   +  ++K DK  KKK+  +  A E+S K+ E+ K      +  + 
Sbjct: 46  KKEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKK----HQEEE 101

Query: 60  KKRNSNQLENNQPTESSTDPIKEK 83
           +K+   Q +  Q  E++   +KEK
Sbjct: 102 RKKQEEQAKRQQEEEAAAQ-MKEK 124


>gi|116235478 establishment of cohesion 1 homolog 1 [Homo sapiens]
          Length = 840

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 11/86 (12%)

Query: 6  SSTNENKM--KSPCESNKRKVDKKKKNLHRASAPEQSLKETEKAKYPTLVFYCRKNKKRN 63
          S  N +K+  KS  ++++ ++   +KNL + S P++++K   K+             K N
Sbjct: 8  SKENSSKVTKKSDDKNSETEIQDSQKNLAKKSGPKETIKSQAKSS---------SESKIN 58

Query: 64 SNQLENNQPTESSTDPIKEKGDLDIS 89
            +LE    T SS     +K    I+
Sbjct: 59 QPELETRMSTRSSKAASNDKATKSIN 84


>gi|29789008 Huntingtin interacting protein C isoform 2 [Homo
           sapiens]
          Length = 858

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 6/74 (8%)

Query: 22  RKVDKKKKNLH--RASAPEQSLKETEKAKYPTLVFYCRKNKKRNSNQLENNQPTESSTDP 79
           RK  +K K  H  R+ +P  S  E E+   P+L    R  K+R  N  E+     SS D 
Sbjct: 683 RKHGRKGKKHHHKRSHSPSGSESEEEELPPPSL----RPPKRRRRNPSESGSEPSSSLDS 738

Query: 80  IKEKGDLDISAGSP 93
           ++  G      GSP
Sbjct: 739 VESGGAALGGRGSP 752


>gi|72534686 Huntingtin interacting protein C isoform 1 [Homo
           sapiens]
          Length = 871

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 6/74 (8%)

Query: 22  RKVDKKKKNLH--RASAPEQSLKETEKAKYPTLVFYCRKNKKRNSNQLENNQPTESSTDP 79
           RK  +K K  H  R+ +P  S  E E+   P+L    R  K+R  N  E+     SS D 
Sbjct: 696 RKHGRKGKKHHHKRSHSPSGSESEEEELPPPSL----RPPKRRRRNPSESGSEPSSSLDS 751

Query: 80  IKEKGDLDISAGSP 93
           ++  G      GSP
Sbjct: 752 VESGGAALGGRGSP 765


>gi|109637761 calpastatin isoform g [Homo sapiens]
          Length = 772

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 11/87 (12%)

Query: 11  NKMKSPCESNKRKVDKKKKNLHRASAPEQSLKETEKAKYPTLVFYCRKNKKRNSNQLENN 70
           NK K   ++ K + +KK ++    S P+Q+        +         NKK  S   E  
Sbjct: 105 NKKKHKKQAVKTEPEKKSQSTKPKSLPKQASDTGSNDAH---------NKKAVSRSAEQ- 154

Query: 71  QPTESSTDPIKEKGDLDISAGSPQDGG 97
           QP+E ST+P  +  D+ ISAG     G
Sbjct: 155 QPSEKSTEPKTKPQDM-ISAGGESVAG 180


>gi|195963316 PWWP domain containing 2A isoform b [Homo sapiens]
          Length = 755

 Score = 29.6 bits (65), Expect = 0.54
 Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 3/93 (3%)

Query: 2   EEPTSSTNENKMKSP---CESNKRKVDKKKKNLHRASAPEQSLKETEKAKYPTLVFYCRK 58
           EEPTS  N  K++     C+  K  V  +KK + + S+   S K  +K +    V    K
Sbjct: 304 EEPTSIMNAIKLRPRQVLCDKCKNSVVAEKKEIRKGSSATDSSKYEDKKRRNESVTTVNK 363

Query: 59  NKKRNSNQLENNQPTESSTDPIKEKGDLDISAG 91
             K +      NQ      + + +  ++  S G
Sbjct: 364 KLKTDHKVDGKNQNESQKRNAVVKVSNIAHSRG 396


>gi|153791982 PWWP domain containing 2A isoform a [Homo sapiens]
          Length = 560

 Score = 29.6 bits (65), Expect = 0.54
 Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 3/93 (3%)

Query: 2   EEPTSSTNENKMKSP---CESNKRKVDKKKKNLHRASAPEQSLKETEKAKYPTLVFYCRK 58
           EEPTS  N  K++     C+  K  V  +KK + + S+   S K  +K +    V    K
Sbjct: 304 EEPTSIMNAIKLRPRQVLCDKCKNSVVAEKKEIRKGSSATDSSKYEDKKRRNESVTTVNK 363

Query: 59  NKKRNSNQLENNQPTESSTDPIKEKGDLDISAG 91
             K +      NQ      + + +  ++  S G
Sbjct: 364 KLKTDHKVDGKNQNESQKRNAVVKVSNIAHSRG 396


>gi|238624188 diffuse panbronchiolitis critical region 1 protein
           [Homo sapiens]
          Length = 1393

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)

Query: 2   EEPTSSTNENKMKSPCESNKRKVDKKKKNLHRASA-PEQSLKETEKAKYPTLVFYCRKNK 60
           EE T   NEN   SP E  + +     +N   + A P ++ + T   K         +N+
Sbjct: 605 EERTPLANENTTPSPAEPTENRERTANENTTPSPAGPTENREMTANEKTTLFPAEPTENR 664

Query: 61  KRNSNQLENNQPTE 74
           +R +N+   + P E
Sbjct: 665 ERTANEKTTSSPAE 678


>gi|113425145 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 2 isoform 3 [Homo sapiens]
          Length = 632

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 18/67 (26%), Positives = 29/67 (43%)

Query: 2   EEPTSSTNENKMKSPCESNKRKVDKKKKNLHRASAPEQSLKETEKAKYPTLVFYCRKNKK 61
           E PTSS     ++SPC+     +D     + R     +SLK+ +K     L    + N +
Sbjct: 64  EGPTSSATLKDLESPCQERAVVLDSTSVKISRLKNTIKSLKQQKKQVEHQLEEEKKANNE 123

Query: 62  RNSNQLE 68
           R   + E
Sbjct: 124 RQKAERE 130


>gi|113425137 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 2 isoform 3 [Homo sapiens]
          Length = 632

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 18/67 (26%), Positives = 29/67 (43%)

Query: 2   EEPTSSTNENKMKSPCESNKRKVDKKKKNLHRASAPEQSLKETEKAKYPTLVFYCRKNKK 61
           E PTSS     ++SPC+     +D     + R     +SLK+ +K     L    + N +
Sbjct: 64  EGPTSSATLKDLESPCQERAVVLDSTSVKISRLKNTIKSLKQQKKQVEHQLEEEKKANNE 123

Query: 62  RNSNQLE 68
           R   + E
Sbjct: 124 RQKAERE 130


>gi|113425121 PREDICTED: similar to Golgin subfamily A member 8-like
           protein 2 isoform 4 [Homo sapiens]
          Length = 632

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 18/67 (26%), Positives = 29/67 (43%)

Query: 2   EEPTSSTNENKMKSPCESNKRKVDKKKKNLHRASAPEQSLKETEKAKYPTLVFYCRKNKK 61
           E PTSS     ++SPC+     +D     + R     +SLK+ +K     L    + N +
Sbjct: 64  EGPTSSATLKDLESPCQERAVVLDSTSVKISRLKNTIKSLKQQKKQVEHQLEEEKKANNE 123

Query: 62  RNSNQLE 68
           R   + E
Sbjct: 124 RQKAERE 130


>gi|239740773 PREDICTED: similar to diffuse panbronchiolitis
           critical region 1 [Homo sapiens]
          Length = 1400

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)

Query: 2   EEPTSSTNENKMKSPCESNKRKVDKKKKNLHRASA-PEQSLKETEKAKYPTLVFYCRKNK 60
           EE T   NEN   SP E  + +     +N   + A P ++ + T   K         +N+
Sbjct: 667 EERTPLANENTTPSPAEPTENRERTANENTTPSPAGPTENREMTANEKTTLFPAEPTENR 726

Query: 61  KRNSNQLENNQPTE 74
           +R +N+   + P E
Sbjct: 727 ERTANEKTTSSPAE 740


>gi|116805348 trinucleotide repeat containing 6A [Homo sapiens]
          Length = 1962

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 14/31 (45%), Positives = 18/31 (58%)

Query: 18 ESNKRKVDKKKKNLHRASAPEQSLKETEKAK 48
          E  K+K DKKKK   +  A EQ +K  E+ K
Sbjct: 30 EKKKKKDDKKKKEAAQKKATEQKIKVPEQIK 60


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.299    0.118    0.321 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,255,800
Number of Sequences: 37866
Number of extensions: 173445
Number of successful extensions: 836
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 708
Number of HSP's gapped (non-prelim): 175
length of query: 99
length of database: 18,247,518
effective HSP length: 70
effective length of query: 29
effective length of database: 15,596,898
effective search space: 452310042
effective search space used: 452310042
T: 11
A: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.