Guide to the Human Genome
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Name: SPANXN5 Sequence: fasta or formatted (72aa) NCBI GI: 57528144
Description:

SPANX family, member N5

Referenced in:

Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.0          0           0
 C cysteine            2.8          2           1
 D aspartate           5.6          4           1
 E glutamate           9.7          7           1
 F phenylalanine       0.0          0           0
 G glycine             1.4          1           1
 H histidine           1.4          1           1
 I isoleucine          1.4          1           1
 K lysine             13.9         10           2
 L leucine             8.3          6           1
 M methionine          4.2          3           1
 N asparagine          8.3          6           1
 P proline             5.6          4           1
 Q glutamine           4.2          3           1
 R arginine            4.2          3           1
 S serine             13.9         10           2
 T threonine           8.3          6           1
 V valine              4.2          3           1
 W tryptophan          0.0          0           0
 Y tyrosine            2.8          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SPANX family, member N5 
SPANXN1               0.862   SPANX-N1 protein 
SPANXN3               0.610   SPANX-N3 protein 
SPANXN2               0.610   SPANX-N2 protein 
SPANXN4               0.325   SPANX family, member N4 
SPANXA1               0.317   sperm protein associated with the nucleus, X chromos...
SPANXA2               0.317   sperm protein associated with the nucleus, X chromos...
SPANXC                0.301   sperm protein associated with the nucleus, X chromos...
SPANXD                0.260   SPANX family, member D 
SPANXE                0.260   SPANX family, member E 
SPANXB1               0.228   SPANX family, member B1 
SPANXB2               0.228   sperm protein associated with the nucleus, X chromos...
SPANXF1               0.220   SPANX family, member F1 
ZKSCAN5               0.008   zinc finger with KRAB and SCAN domains 5 
ZKSCAN5               0.008   zinc finger with KRAB and SCAN domains 5 
GOLGA4                0.008   golgi autoantigen, golgin subfamily a, 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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