Guide to the Human Genome
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Name: TMEM169 Sequence: fasta or formatted (297aa) NCBI GI: 19923913
Description:

transmembrane protein 169

Not currently referenced in the text

Other entries for this name:
alt mRNA {297aa} transmembrane protein 169
alt mRNA {297aa} transmembrane protein 169
alt mRNA {297aa} transmembrane protein 169
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         15           3
 C cysteine            2.4          7           1
 D aspartate           5.7         17           3
 E glutamate           9.8         29           3
 F phenylalanine       2.7          8           1
 G glycine             6.4         19           2
 H histidine           1.7          5           1
 I isoleucine          4.7         14           3
 K lysine              5.7         17           3
 L leucine             9.4         28           2
 M methionine          3.0          9           1
 N asparagine          2.0          6           1
 P proline             5.4         16           1
 Q glutamine           3.4         10           1
 R arginine            4.0         12           1
 S serine              8.4         25           2
 T threonine           6.4         19           2
 V valine              7.1         21           2
 W tryptophan          3.0          9           2
 Y tyrosine            3.7         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 169 
TMEM169               1.000   transmembrane protein 169 
TMEM169               1.000   transmembrane protein 169 
TMEM169               1.000   transmembrane protein 169 
ISY1                  0.020   ISY1 splicing factor homolog 
ECM2                  0.019   extracellular matrix protein 2 precursor 
BPTF                  0.019   bromodomain PHD finger transcription factor isoform ...
BPTF                  0.019   bromodomain PHD finger transcription factor isoform ...
C5orf41               0.015   luman-recruiting factor 
ATAD2                 0.014   ATPase family, AAA domain containing 2 
ARFGEF2               0.014   ADP-ribosylation factor guanine nucleotide-exchange...
NFASC                 0.012   neurofascin isoform 3 precursor 
NFASC                 0.012   neurofascin isoform 2 precursor 
NFASC                 0.012   neurofascin isoform 4 precursor 
NCL                   0.012   nucleolin 
LOC645490             0.012   PREDICTED: similar to hCG1991922 
NFASC                 0.012   neurofascin isoform 1 precursor 
SF3B2                 0.012   splicing factor 3B subunit 2 
NAP1L1                0.012   nucleosome assembly protein 1-like 1 
NAP1L1                0.012   nucleosome assembly protein 1-like 1 
SPANXN4               0.012   SPANX family, member N4 
KCTD1                 0.012   potassium channel tetramerisation domain containing...
SLC2A10               0.012   solute carrier family 2 member 10 
POLR3G                0.010   polymerase (RNA) III (DNA directed) polypeptide G (...
NOP2                  0.010   nucleolar protein 1, 120kDa 
NOP2                  0.010   nucleolar protein 1, 120kDa 
EID1                  0.010   CREBBP/EP300 inhibitor 1 
ATRX                  0.010   transcriptional regulator ATRX isoform 2 
ATRX                  0.010   transcriptional regulator ATRX isoform 1 
PCNX                  0.010   pecanex-like 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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