Guide to the Human Genome
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Name: ESCO1 Sequence: fasta or formatted (840aa) NCBI GI: 116235478
Description:

establishment of cohesion 1 homolog 1

Referenced in:

Additional Cell Cycle Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         35           2
 C cysteine            2.5         21           2
 D aspartate           3.6         30           2
 E glutamate           9.0         76           3
 F phenylalanine       2.4         20           2
 G glycine             3.2         27           1
 H histidine           2.0         17           2
 I isoleucine          5.5         46           2
 K lysine             11.9        100           3
 L leucine             6.5         55           2
 M methionine          1.9         16           2
 N asparagine          6.2         52           1
 P proline             4.9         41           2
 Q glutamine           6.4         54           2
 R arginine            4.5         38           2
 S serine             11.3         95           3
 T threonine           6.3         53           2
 V valine              5.7         48           2
 W tryptophan          0.6          5           1
 Y tyrosine            1.3         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   establishment of cohesion 1 homolog 1 
ESCO2                 0.174   establishment of cohesion 1 homolog 2 
NEFH                  0.026   neurofilament, heavy polypeptide 200kDa 
MAP1B                 0.023   microtubule-associated protein 1B 
TRDN                  0.022   triadin 
EIF5B                 0.021   eukaryotic translation initiation factor 5B 
CHD7                  0.020   chromodomain helicase DNA binding protein 7 
MYST4                 0.019   MYST histone acetyltransferase (monocytic leukemia)...
BDP1                  0.019   transcription factor-like nuclear regulator 
FAM133A               0.018   hypothetical protein LOC286499 
NIPBL                 0.018   delangin isoform B 
NIPBL                 0.018   delangin isoform A 
ATRX                  0.018   transcriptional regulator ATRX isoform 2 
ATRX                  0.018   transcriptional regulator ATRX isoform 1 
BOD1L                 0.017   biorientation of chromosomes in cell division 1-like...
PRPF4B                0.017   serine/threonine-protein kinase PRP4K 
GOLGB1                0.016   golgi autoantigen, golgin subfamily b, macrogolgin ...
SRRM2                 0.016   splicing coactivator subunit SRm300 
RSF1                  0.016   remodeling and spacing factor 1 
CGNL1                 0.016   cingulin-like 1 
NCOR1                 0.016   nuclear receptor co-repressor 1 
PRG4                  0.016   proteoglycan 4 isoform B 
PRG4                  0.016   proteoglycan 4 isoform A 
CYLC1                 0.016   cylicin, basic protein of sperm head cytoskeleton 1...
SON                   0.016   SON DNA-binding protein isoform F 
SON                   0.016   SON DNA-binding protein isoform B 
HMMR                  0.016   hyaluronan-mediated motility receptor isoform b [Ho...
FAM133B               0.016   hypothetical protein LOC257415 isoform 2 
FAM133B               0.016   hypothetical protein LOC257415 isoform 1 
KIF21A                0.015   kinesin family member 21A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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