VAMP5 33409

Name: VAMP5	Sequence: fasta or formatted (116aa)		NCBI GI: 5730112
Description: vesicle-associated membrane protein 5		Referenced in: ER, Golgi, and the Secretory Pathway
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 7 1 C cysteine 2.6 3 1 D aspartate 3.4 4 1 E glutamate 6.0 7 1 F phenylalanine 2.6 3 1 G glycine 6.9 8 1 H histidine 0.0 0 0 I isoleucine 6.9 8 2 K lysine 4.3 5 2 L leucine 12.1 14 2 M methionine 2.6 3 1 N asparagine 6.0 7 2 P proline 2.6 3 1 Q glutamine 8.6 10 3 R arginine 6.0 7 1 S serine 7.8 9 3 T threonine 4.3 5 2 V valine 9.5 11 3 W tryptophan 0.9 1 1 Y tyrosine 0.9 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 vesicle-associated membrane protein 5 VAMP2 0.193 vesicle-associated membrane protein 2 (synaptobrevi... VAMP4 0.183 vesicle-associated membrane protein 4 VAMP3 0.178 vesicle-associated membrane protein 3 VAMP1 0.173 vesicle-associated membrane protein 1 isoform 1 [Homo... VAMP1 0.163 vesicle-associated membrane protein 1 isoform 2 [Hom... VAMP1 0.163 vesicle-associated membrane protein 1 isoform 3 [Homo... VAMP7 0.134 vesicle-associated membrane protein 7 isoform 2 [Ho... VAMP7 0.134 vesicle-associated membrane protein 7 isoform 1 [Homo... VAMP8 0.119 vesicle-associated membrane protein 8 STX10 0.020 syntaxin 10 CD79B 0.020 CD79B antigen isoform 3 precursor CD79B 0.020 CD79B antigen isoform 2 precursor CD79B 0.020 CD79B antigen isoform 1 precursor STX6 0.020 syntaxin 6 CD38 0.015 CD38 antigen PCDH7 0.015 protocadherin 7 isoform b precursor PCDH7 0.015 protocadherin 7 isoform c precursor PCDH7 0.015 protocadherin 7 isoform a precursor SI 0.010 sucrase-isomaltase HLA-A 0.010 major histocompatibility complex, class I, A precurs... KIF4B 0.010 kinesin family member 4B HLA-F 0.010 major histocompatibility complex, class I, F isofor... MPZ 0.010 myelin protein zero STXBP5 0.010 syntaxin binding protein 5 (tomosyn) isoform b [Hom... STXBP5 0.010 syntaxin binding protein 5 (tomosyn) isoform a [Hom... SLC38A1 0.005 amino acid transporter system A1 SLC38A1 0.005 amino acid transporter system A1 TMCC1 0.005 transmembrane and coiled-coil domain family 1 isofor... TMCC1 0.005 transmembrane and coiled-coil domain family 1 isofo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.