TMCC1 10507

Name: TMCC1	Sequence: fasta or formatted (539aa)		NCBI GI: 190014612
Description: transmembrane and coiled-coil domain family 1 isoform c		Referenced in: Coiled-Coil Proteins
Other entries for this name: alt prot [653aa] transmembrane and coiled-coil domain family 1 isoform a alt prot [329aa] transmembrane and coiled-coil domain family 1 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.2 55 8 C cysteine 1.1 6 1 D aspartate 4.3 23 2 E glutamate 8.2 44 2 F phenylalanine 3.2 17 2 G glycine 5.6 30 2 H histidine 2.0 11 1 I isoleucine 4.8 26 1 K lysine 6.3 34 2 L leucine 8.9 48 2 M methionine 2.2 12 2 N asparagine 3.5 19 1 P proline 2.8 15 1 Q glutamine 7.6 41 6 R arginine 5.8 31 2 S serine 10.0 54 3 T threonine 5.8 31 2 V valine 5.8 31 2 W tryptophan 0.4 2 1 Y tyrosine 1.7 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transmembrane and coiled-coil domain family 1 isofo... TMCC1 1.000 transmembrane and coiled-coil domain family 1 isofo... TMCC1 0.604 transmembrane and coiled-coil domain family 1 isofor... TMCC2 0.555 transmembrane and coiled-coil domain family 2 TMCC3 0.396 transmembrane and coiled-coil domain family 3 [Homo... TEX28 0.108 testis expressed 28 GOLGA4 0.022 golgi autoantigen, golgin subfamily a, 4 MYH3 0.021 myosin, heavy chain 3, skeletal muscle, embryonic [H... MYO18A 0.021 myosin 18A isoform b MYO18A 0.021 myosin 18A isoform a GOLGA2 0.021 Golgi autoantigen, golgin subfamily a, 2 LRSAM1 0.021 leucine rich repeat and sterile alpha motif containi... LRSAM1 0.021 leucine rich repeat and sterile alpha motif containi... LRSAM1 0.021 leucine rich repeat and sterile alpha motif containi... CCDC30 0.020 coiled-coil domain containing 30 MYH4 0.020 myosin, heavy polypeptide 4, skeletal muscle MYH9 0.019 myosin, heavy polypeptide 9, non-muscle NUMA1 0.019 nuclear mitotic apparatus protein 1 MYH2 0.019 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.019 myosin, heavy chain 2, skeletal muscle, adult [Homo... SYCE1 0.019 synaptonemal complex central element protein 1 isof... SYCE1 0.019 synaptonemal complex central element protein 1 isof... HOOK2 0.019 hook homolog 2 isoform 2 HOOK2 0.019 hook homolog 2 isoform 1 ZNF853 0.019 zinc finger protein 853 NBPF11 0.019 hypothetical protein LOC728912 LOC200030 0.019 neuroblastoma breakpoint family, member 11-like [Ho... TPR 0.018 nuclear pore complex-associated protein TPR CDK5RAP2 0.018 CDK5 regulatory subunit associated protein 2 isoform... LOC100133220 0.018 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.