STX6 31539

Name: STX6	Sequence: fasta or formatted (255aa)		NCBI GI: 5032131
Description: syntaxin 6		Referenced in: ER, Golgi, and the Secretory Pathway
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 16 1 C cysteine 0.4 1 1 D aspartate 6.3 16 1 E glutamate 9.4 24 2 F phenylalanine 3.5 9 2 G glycine 3.9 10 2 H histidine 1.2 3 1 I isoleucine 5.1 13 1 K lysine 4.3 11 2 L leucine 11.8 30 2 M methionine 3.1 8 1 N asparagine 4.3 11 2 P proline 1.2 3 1 Q glutamine 8.6 22 3 R arginine 6.7 17 2 S serine 8.2 21 2 T threonine 6.3 16 2 V valine 7.1 18 2 W tryptophan 2.0 5 1 Y tyrosine 0.4 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 syntaxin 6 STX10 0.591 syntaxin 10 STX8 0.068 syntaxin 8 MYH11 0.053 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.053 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.053 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.053 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... MYH10 0.040 myosin, heavy polypeptide 10, non-muscle STX1A 0.038 syntaxin 1A (brain) SMC3 0.032 structural maintenance of chromosomes 3 SNAP25 0.032 synaptosomal-associated protein 25 isoform SNAP25B [... SNAP25 0.032 synaptosomal-associated protein 25 isoform SNAP25A [... MYH3 0.032 myosin, heavy chain 3, skeletal muscle, embryonic [H... NUMA1 0.030 nuclear mitotic apparatus protein 1 FAM184A 0.030 hypothetical protein LOC79632 isoform 2 FAM184A 0.030 hypothetical protein LOC79632 isoform 1 EEA1 0.026 early endosome antigen 1, 162kD LEKR1 0.026 leucine, glutamate and lysine rich 1 ERC1 0.026 RAB6-interacting protein 2 isoform epsilon ERC1 0.026 RAB6-interacting protein 2 isoform delta C6orf204 0.026 chromosome 6 open reading frame 204 isoform a [Homo... CEP250 0.023 centrosomal protein 2 MYH7B 0.023 myosin, heavy polypeptide 7B, cardiac muscle, beta ... SMC1A 0.023 structural maintenance of chromosomes 1A MYH4 0.023 myosin, heavy polypeptide 4, skeletal muscle FKBP15 0.023 FK506 binding protein 15, 133kDa TPR 0.021 nuclear pore complex-associated protein TPR SYCP1 0.021 synaptonemal complex protein 1 CENPQ 0.021 centromere protein Q WDR87 0.021 NYD-SP11 protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.