TMCC1 27250

Name: TMCC1	Sequence: fasta or formatted (329aa)		NCBI GI: 39930343
Description: transmembrane and coiled-coil domain family 1 isoform b		Referenced in: Coiled-Coil Proteins
Other entries for this name: alt prot [653aa] transmembrane and coiled-coil domain family 1 isoform a alt prot [539aa] transmembrane and coiled-coil domain family 1 isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.2 27 2 C cysteine 1.2 4 1 D aspartate 4.0 13 2 E glutamate 9.1 30 2 F phenylalanine 4.6 15 2 G glycine 6.1 20 2 H histidine 1.8 6 1 I isoleucine 4.6 15 1 K lysine 4.9 16 1 L leucine 10.6 35 2 M methionine 2.1 7 1 N asparagine 4.3 14 1 P proline 1.5 5 1 Q glutamine 7.0 23 6 R arginine 4.9 16 1 S serine 10.3 34 3 T threonine 5.2 17 2 V valine 7.0 23 2 W tryptophan 0.6 2 1 Y tyrosine 2.1 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transmembrane and coiled-coil domain family 1 isofor... TMCC1 1.000 transmembrane and coiled-coil domain family 1 isofo... TMCC1 1.000 transmembrane and coiled-coil domain family 1 isofo... TMCC2 0.598 transmembrane and coiled-coil domain family 2 TMCC3 0.426 transmembrane and coiled-coil domain family 3 [Homo... TEX28 0.158 testis expressed 28 GOLGA4 0.036 golgi autoantigen, golgin subfamily a, 4 MYO18A 0.034 myosin 18A isoform b MYO18A 0.034 myosin 18A isoform a LRSAM1 0.034 leucine rich repeat and sterile alpha motif containi... LRSAM1 0.034 leucine rich repeat and sterile alpha motif containi... LRSAM1 0.034 leucine rich repeat and sterile alpha motif containi... SYCE1 0.031 synaptonemal complex central element protein 1 isof... SYCE1 0.031 synaptonemal complex central element protein 1 isof... HOOK2 0.031 hook homolog 2 isoform 2 HOOK2 0.031 hook homolog 2 isoform 1 ZNF853 0.031 zinc finger protein 853 NBPF11 0.031 hypothetical protein LOC728912 LOC200030 0.031 neuroblastoma breakpoint family, member 11-like [Ho... TPR 0.029 nuclear pore complex-associated protein TPR LOC100133220 0.029 PREDICTED: hypothetical protein LOC400352 0.028 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.028 PREDICTED: similar to Putative golgin subfamily A m... PCNT 0.028 pericentrin KIAA1598 0.028 shootin1 isoform a KIAA1598 0.028 shootin1 isoform b MYH8 0.028 myosin, heavy chain 8, skeletal muscle, perinatal [... CCDC30 0.026 coiled-coil domain containing 30 GOLGA2 0.026 Golgi autoantigen, golgin subfamily a, 2 SYCE1 0.026 synaptonemal complex central element protein 1 isofo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.