VAMP4 28002

Name: VAMP4	Sequence: fasta or formatted (141aa)		NCBI GI: 42544207
Description: vesicle-associated membrane protein 4		Referenced in: ER, Golgi, and the Secretory Pathway
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.3 6 2 C cysteine 0.7 1 1 D aspartate 9.2 13 3 E glutamate 7.8 11 3 F phenylalanine 3.5 5 2 G glycine 4.3 6 1 H histidine 1.4 2 1 I isoleucine 7.8 11 3 K lysine 7.8 11 1 L leucine 9.2 13 3 M methionine 3.5 5 1 N asparagine 5.0 7 1 P proline 3.5 5 2 Q glutamine 4.3 6 1 R arginine 9.2 13 2 S serine 6.4 9 1 T threonine 2.8 4 1 V valine 7.1 10 1 W tryptophan 1.4 2 2 Y tyrosine 0.7 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 vesicle-associated membrane protein 4 VAMP3 0.233 vesicle-associated membrane protein 3 VAMP2 0.222 vesicle-associated membrane protein 2 (synaptobrevi... VAMP1 0.222 vesicle-associated membrane protein 1 isoform 2 [Hom... VAMP1 0.218 vesicle-associated membrane protein 1 isoform 1 [Homo... VAMP1 0.214 vesicle-associated membrane protein 1 isoform 3 [Homo... VAMP8 0.171 vesicle-associated membrane protein 8 VAMP7 0.152 vesicle-associated membrane protein 7 isoform 2 [Ho... VAMP7 0.152 vesicle-associated membrane protein 7 isoform 1 [Homo... VAMP5 0.144 vesicle-associated membrane protein 5 YKT6 0.054 YKT6 v-SNARE protein TSNARE1 0.039 t-SNARE domain containing 1 SUPT6H 0.031 suppressor of Ty 6 homolog STXBP6 0.027 amisyn MYH11 0.023 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.023 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.023 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.023 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... STXBP5L 0.023 syntaxin binding protein 5-like LOC645202 0.019 PREDICTED: hypothetical protein LOC645202 BMS1 0.019 BMS1-like, ribosome assembly protein SGOL2 0.019 shugoshin-like 2 isoform 2 SGOL2 0.019 shugoshin-like 2 isoform 1 SGOL2 0.019 shugoshin-like 2 isoform 3 HOOK1 0.019 hook homolog 1 CHD2 0.019 chromodomain helicase DNA binding protein 2 isoform... CHD2 0.019 chromodomain helicase DNA binding protein 2 isoform... CCDC146 0.019 coiled-coil domain containing 146 ATG2A 0.016 autophagy related 2A CCDC88A 0.016 coiled-coil domain containing 88A isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.