VAMP8 3664

Name: VAMP8	Sequence: fasta or formatted (100aa)		NCBI GI: 14043026
Description: vesicle-associated membrane protein 8		Referenced in: ER, Golgi, and the Secretory Pathway
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 6 1 C cysteine 1.0 1 1 D aspartate 2.0 2 1 E glutamate 11.0 11 2 F phenylalanine 6.0 6 1 G glycine 6.0 6 3 H histidine 2.0 2 1 I isoleucine 9.0 9 3 K lysine 7.0 7 1 L leucine 8.0 8 1 M methionine 3.0 3 1 N asparagine 7.0 7 1 P proline 0.0 0 0 Q glutamine 3.0 3 1 R arginine 6.0 6 1 S serine 5.0 5 1 T threonine 6.0 6 2 V valine 10.0 10 1 W tryptophan 2.0 2 2 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 vesicle-associated membrane protein 8 VAMP2 0.287 vesicle-associated membrane protein 2 (synaptobrevi... VAMP7 0.282 vesicle-associated membrane protein 7 isoform 2 [Ho... VAMP7 0.282 vesicle-associated membrane protein 7 isoform 1 [Homo... VAMP1 0.264 vesicle-associated membrane protein 1 isoform 1 [Homo... VAMP3 0.264 vesicle-associated membrane protein 3 VAMP1 0.253 vesicle-associated membrane protein 1 isoform 2 [Hom... VAMP1 0.253 vesicle-associated membrane protein 1 isoform 3 [Homo... VAMP4 0.253 vesicle-associated membrane protein 4 VAMP5 0.138 vesicle-associated membrane protein 5 SEC22B 0.080 SEC22 vesicle trafficking protein homolog B YKT6 0.069 YKT6 v-SNARE protein STXBP6 0.057 amisyn DYSF 0.052 dysferlin isoform 2 DYSF 0.052 dysferlin isoform 8 DYSF 0.052 dysferlin isoform 1 DYSF 0.052 dysferlin isoform 3 DYSF 0.052 dysferlin isoform 4 DYSF 0.052 dysferlin isoform 5 DYSF 0.052 dysferlin isoform 6 DYSF 0.052 dysferlin isoform 7 DYSF 0.052 dysferlin isoform 14 DYSF 0.052 dysferlin isoform 13 DYSF 0.052 dysferlin isoform 12 DYSF 0.052 dysferlin isoform 11 DYSF 0.052 dysferlin isoform 10 DYSF 0.052 dysferlin isoform 9 FER1L6 0.040 fer-1-like 6 STX2 0.040 syntaxin 2 isoform 1 TAOK2 0.040 TAO kinase 2 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.