VAMP3 30860

Name: VAMP3	Sequence: fasta or formatted (100aa)		NCBI GI: 4759300
Description: vesicle-associated membrane protein 3		Referenced in: ER, Golgi, and the Secretory Pathway Synapses
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.0 9 2 C cysteine 1.0 1 1 D aspartate 7.0 7 2 E glutamate 4.0 4 1 F phenylalanine 2.0 2 1 G glycine 4.0 4 1 H histidine 0.0 0 0 I isoleucine 9.0 9 5 K lysine 7.0 7 1 L leucine 7.0 7 1 M methionine 3.0 3 1 N asparagine 4.0 4 1 P proline 1.0 1 1 Q glutamine 7.0 7 2 R arginine 6.0 6 2 S serine 7.0 7 2 T threonine 6.0 6 1 V valine 11.0 11 2 W tryptophan 4.0 4 2 Y tyrosine 1.0 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 vesicle-associated membrane protein 3 VAMP2 0.661 vesicle-associated membrane protein 2 (synaptobrevi... VAMP1 0.661 vesicle-associated membrane protein 1 isoform 1 [Homo... VAMP1 0.649 vesicle-associated membrane protein 1 isoform 2 [Hom... VAMP1 0.649 vesicle-associated membrane protein 1 isoform 3 [Homo... VAMP4 0.345 vesicle-associated membrane protein 4 VAMP8 0.264 vesicle-associated membrane protein 8 VAMP5 0.207 vesicle-associated membrane protein 5 VAMP7 0.167 vesicle-associated membrane protein 7 isoform 2 [Ho... VAMP7 0.167 vesicle-associated membrane protein 7 isoform 1 [Homo... SEC22B 0.080 SEC22 vesicle trafficking protein homolog B LOC283685 0.040 PREDICTED: golgi autoantigen, golgin subfamily a-li... LOC651807 0.040 PREDICTED: hypothetical protein DNAH9 0.029 dynein, axonemal, heavy chain 9 isoform 2 YKT6 0.029 YKT6 v-SNARE protein LAMA2 0.023 laminin alpha 2 subunit isoform b precursor LAMA2 0.023 laminin alpha 2 subunit isoform a precursor LOC283685 0.017 PREDICTED: golgi autoantigen, golgin subfamily a-li... HESX1 0.017 HESX homeobox 1 SBNO1 0.017 sno, strawberry notch homolog 1 CCDC42B 0.011 coiled-coil domain containing 42B IRX1 0.011 iroquois homeobox protein 1 TSNARE1 0.011 t-SNARE domain containing 1 STXBP5L 0.011 syntaxin binding protein 5-like STX16 0.011 syntaxin 16 isoform a STX6 0.011 syntaxin 6 STX16 0.011 syntaxin 16 isoform d STX16 0.011 syntaxin 16 isoform c STX16 0.011 syntaxin 16 isoform b MYO18A 0.006 myosin 18A isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.