Guide to the Human Genome
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Name: MPZ Sequence: fasta or formatted (258aa) NCBI GI: 4505243
Description:

myelin protein zero

Referenced in:

Oligodendrocytes and Myelin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         20           2
 C cysteine            1.2          3           1
 D aspartate           5.4         14           2
 E glutamate           3.5          9           1
 F phenylalanine       3.1          8           1
 G glycine             8.1         21           2
 H histidine           2.3          6           1
 I isoleucine          4.3         11           1
 K lysine              7.0         18           2
 L leucine             9.3         24           6
 M methionine          1.6          4           1
 N asparagine          1.2          3           1
 P proline             6.2         16           2
 Q glutamine           3.1          8           1
 R arginine            6.6         17           2
 S serine              8.9         23           3
 T threonine           4.3         11           1
 V valine             10.1         26           2
 W tryptophan          2.3          6           1
 Y tyrosine            3.9         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myelin protein zero 
MPZL1                 0.216   myelin protein zero-like 1 isoform a 
MPZL1                 0.198   myelin protein zero-like 1 isoform b 
MPZL3                 0.158   myelin protein zero-like 3 
MPZL2                 0.154   myelin protein zero-like 2 precursor 
MPZL2                 0.154   myelin protein zero-like 2 precursor 
SCN2B                 0.082   sodium channel, voltage-gated, type II, beta 
VSIG1                 0.078   V-set and immunoglobulin domain containing 1 
SCN3B                 0.074   voltage-gated sodium channel beta-3 subunit precursor...
SCN3B                 0.074   voltage-gated sodium channel beta-3 subunit precurso...
SCN4B                 0.072   sodium channel, voltage-gated, type IV, beta isoform...
PVRL1                 0.056   poliovirus receptor-related 1 isoform 3 
PVRL1                 0.056   poliovirus receptor-related 1 isoform 2 
PVRL1                 0.056   poliovirus receptor-related 1 isoform 1 
SCN4B                 0.048   sodium channel, voltage-gated, type IV, beta isofor...
AMICA1                0.048   adhesion molecule, interacts with CXADR antigen 1 i...
AMICA1                0.048   adhesion molecule, interacts with CXADR antigen 1 i...
SCN1B                 0.044   sodium channel, voltage-gated, type I, beta isoform a...
IGSF11                0.042   immunoglobulin superfamily, member 11 isoform b [Hom...
CADM1                 0.040   immunoglobulin superfamily, member 4D isoform 2 [Ho...
CXADR                 0.036   coxsackie virus and adenovirus receptor precursor [Ho...
IGSF11                0.034   immunoglobulin superfamily, member 11 isoform a [Hom...
VSIG2                 0.034   V-set and immunoglobulin domain containing 2 
PVRL2                 0.034   poliovirus receptor related 2 isoform alpha precursor...
PVRL2                 0.034   poliovirus receptor related 2 isoform delta precurs...
PTK7                  0.034   PTK7 protein tyrosine kinase 7 isoform a precursor [...
PTK7                  0.034   PTK7 protein tyrosine kinase 7 isoform c precursor [...
PTK7                  0.034   PTK7 protein tyrosine kinase 7 isoform b precursor [...
BTN2A1                0.032   butyrophilin, subfamily 2, member A1 isoform 1 precur...
BTN2A1                0.032   butyrophilin, subfamily 2, member A1 isoform 2 precu...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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