MEFV 29974

Name: MEFV	Sequence: fasta or formatted (781aa)		NCBI GI: 4557743
Description: Mediterranean fever protein		Referenced in: Major Disease Loci Gene Families Macrophages and Monocytes Polymorphism Pyrin and Associated Functions Tripartite Motif Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.0 55 2 C cysteine 2.2 17 1 D aspartate 4.0 31 2 E glutamate 8.7 68 2 F phenylalanine 2.7 21 2 G glycine 7.8 61 3 H histidine 2.4 19 1 I isoleucine 4.0 31 2 K lysine 6.3 49 3 L leucine 9.1 71 2 M methionine 1.2 9 2 N asparagine 2.4 19 1 P proline 7.7 60 2 Q glutamine 5.9 46 2 R arginine 7.0 55 2 S serine 8.6 67 3 T threonine 4.6 36 2 V valine 5.2 41 2 W tryptophan 0.8 6 1 Y tyrosine 2.4 19 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 Mediterranean fever protein TRIM27 0.209 ret finger protein TRIM39 0.150 tripartite motif-containing 39 isoform 1 TRIM39 0.149 tripartite motif-containing 39 isoform 2 TRIM21 0.147 tripartite motif protein 21 TRIM68 0.132 ring finger protein 137 TRIM11 0.129 tripartite motif-containing 11 ERMAP 0.123 erythroblast membrane-associated protein precursor [... ERMAP 0.123 erythroblast membrane-associated protein precursor [... TRIM58 0.121 tripartite motif-containing 58 TRIM7 0.114 tripartite motif-containing 7 isoform 1 TRIM15 0.113 tripartite motif protein 15 TRIM6 0.112 tripartite motif-containing 6 isoform 2 TRIM6 0.112 tripartite motif-containing 6 isoform 1 TRIM38 0.111 tripartite motif-containing 38 TRIM60 0.107 ring finger protein 129 TRIM75 0.107 tripartite motif-containing 75 TRIML1 0.107 tripartite motif family-like 1 TRIM10 0.105 tripartite motif-containing 10 isoform 1 BTN1A1 0.096 butyrophilin, subfamily 1, member A1 TRIM69 0.096 tripartite motif-containing 69 isoform a TRIM34 0.094 tripartite motif protein 34 isoform 1 TRIM34 0.094 tripartite motif protein 34 isoform 1 TRIM6-TRIM34 0.094 tripartite motif-containing 6 and tripartite motif-c... BTN2A2 0.093 butyrophilin, subfamily 2, member A2 isoform b [Homo... BTN2A2 0.093 butyrophilin, subfamily 2, member A2 isoform a TRIM5 0.092 tripartite motif protein TRIM5 isoform alpha TRIM69 0.092 tripartite motif-containing 69 isoform b BTN3A3 0.091 butyrophilin, subfamily 3, member A3 isoform a BTN3A3 0.091 butyrophilin, subfamily 3, member A3 isoform b [Homo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.