Guide to the Human Genome
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Name: CPLX2 Sequence: fasta or formatted (134aa) NCBI GI: 56550065
Description:

complexin 2

Referenced in:

Synapses

Other entries for this name:
alt mRNA [134aa] complexin 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0         12           2
 C cysteine            1.5          2           1
 D aspartate           6.0          8           1
 E glutamate          20.1         27           7
 F phenylalanine       1.5          2           1
 G glycine             7.5         10           2
 H histidine           0.7          1           1
 I isoleucine          2.2          3           1
 K lysine             14.9         20           3
 L leucine             7.5         10           1
 M methionine          4.5          6           1
 N asparagine          0.0          0           0
 P proline             4.5          6           1
 Q glutamine           6.7          9           2
 R arginine            6.0          8           1
 S serine              1.5          2           1
 T threonine           2.2          3           1
 V valine              2.2          3           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.5          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   complexin 2 
CPLX2                 1.000   complexin 2 
CPLX1                 0.832   complexin 1 
CPLX3                 0.152   complexin 3 
RGAG4                 0.123   retrotransposon gag domain containing 4 
USP35                 0.119   ubiquitin specific protease 35 
WDR87                 0.102   NYD-SP11 protein 
LOC100133599          0.098   PREDICTED: hypothetical protein 
LOC283685             0.098   PREDICTED: golgi autoantigen, golgin subfamily a-li...
TCHH                  0.090   trichohyalin 
MAP7D2                0.090   MAP7 domain containing 2 
CPLX4                 0.090   complexin 4 
RBM25                 0.082   RNA binding motif protein 25 
LOC440243             0.082   PREDICTED: Putative golgin subfamily A member 6-lik...
RPGR                  0.078   retinitis pigmentosa GTPase regulator isoform C [Hom...
NEFM                  0.078   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.078   neurofilament, medium polypeptide 150kDa isoform 2 ...
LOC100294088          0.078   PREDICTED: hypothetical protein, partial 
LOC727832             0.074   golgi autoantigen, golgin subfamily a-like 
BAT2D1                0.074   HBxAg transactivated protein 2 
LOC283767             0.070   golgi autoantigen, golgin subfamily a-like 
DNMT1                 0.070   DNA (cytosine-5-)-methyltransferase 1 isoform a [Ho...
DNMT1                 0.070   DNA (cytosine-5-)-methyltransferase 1 isoform b [Homo...
KIAA1211              0.070   hypothetical protein LOC57482 
PELP1                 0.070   proline, glutamic acid and leucine rich protein 1 [...
DBN1                  0.070   drebrin 1 isoform b 
DBN1                  0.070   drebrin 1 isoform a 
LOC100133599          0.070   PREDICTED: hypothetical protein 
LRRC59                0.070   leucine rich repeat containing 59 
USP8                  0.070   ubiquitin specific peptidase 8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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