Guide to the Human Genome
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Name: LRRC59 Sequence: fasta or formatted (307aa) NCBI GI: 40254924
Description:

leucine rich repeat containing 59

Referenced in:

Leucine-rich Repeat Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         25           2
 C cysteine            2.3          7           1
 D aspartate           5.9         18           1
 E glutamate           7.8         24           2
 F phenylalanine       1.3          4           1
 G glycine             3.9         12           2
 H histidine           1.6          5           1
 I isoleucine          1.0          3           1
 K lysine             12.1         37           2
 L leucine            16.3         50           7
 M methionine          0.7          2           1
 N asparagine          4.6         14           2
 P proline             4.6         14           3
 Q glutamine           7.2         22           3
 R arginine            7.5         23           3
 S serine              4.2         13           1
 T threonine           3.6         11           2
 V valine              5.9         18           1
 W tryptophan          1.0          3           1
 Y tyrosine            0.7          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leucine rich repeat containing 59 
CNOT6                 0.081   CCR4-NOT transcription complex, subunit 6 
LRDD                  0.079   leucine rich repeat and death domain containing prot...
LRDD                  0.079   leucine rich repeat and death domain containing prot...
LRDD                  0.079   leucine rich repeat and death domain containing prot...
LRRC40                0.077   leucine rich repeat containing 40 
SCRIB                 0.075   scribble isoform b 
SCRIB                 0.075   scribble isoform a 
CNOT6L                0.074   CCR4-NOT transcription complex, subunit 6-like [Hom...
LRRC39                0.074   leucine rich repeat containing 39 
LRRC7                 0.072   leucine rich repeat containing 7 
SHOC2                 0.070   soc-2 suppressor of clear homolog 
LOC401387             0.070   leucine-rich repeat and death domain-containing pro...
RSU1                  0.070   ras suppressor protein 1 isoform 1 
RSU1                  0.070   ras suppressor protein 1 isoform 2 
LRRC1                 0.069   leucine rich repeat containing 1 
LRRC57                0.069   leucine rich repeat containing 57 
LRRC47                0.067   leucine rich repeat containing 47 
LRRC2                 0.067   leucine rich repeat containing 2 
LRRC2                 0.067   leucine rich repeat containing 2 
LRSAM1                0.067   leucine rich repeat and sterile alpha motif containi...
LRSAM1                0.067   leucine rich repeat and sterile alpha motif containi...
LRSAM1                0.067   leucine rich repeat and sterile alpha motif containi...
ERBB2IP               0.065   ERBB2 interacting protein isoform 7 
ERBB2IP               0.065   ERBB2 interacting protein isoform 2 
LOC100133599          0.065   PREDICTED: hypothetical protein 
MFHAS1                0.063   malignant fibrous histiocytoma amplified sequence 1...
PPIL5                 0.062   peptidylprolyl isomerase (cyclophilin)-like 5 isofor...
LOC100133599          0.062   PREDICTED: hypothetical protein 
LRRIQ4                0.060   leucine-rich repeats and IQ motif containing 4 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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