Guide to the Human Genome
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Name: CPLX3 Sequence: fasta or formatted (158aa) NCBI GI: 71725345
Description:

complexin 3

Referenced in:

Synapses

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         14           2
 C cysteine            0.6          1           1
 D aspartate           6.3         10           1
 E glutamate          13.9         22           5
 F phenylalanine       1.9          3           1
 G glycine             9.5         15           3
 H histidine           1.3          2           1
 I isoleucine          1.3          2           1
 K lysine              9.5         15           1
 L leucine            10.1         16           1
 M methionine          5.1          8           1
 N asparagine          1.9          3           1
 P proline             1.9          3           1
 Q glutamine           7.0         11           1
 R arginine            5.1          8           1
 S serine              5.7          9           1
 T threonine           4.4          7           1
 V valine              3.8          6           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.9          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   complexin 3 
CPLX4                 0.591   complexin 4 
CPLX2                 0.129   complexin 2 
CPLX2                 0.129   complexin 2 
CPLX1                 0.119   complexin 1 
CWC15                 0.052   CWC15 homolog 
ZNF318                0.045   zinc finger protein 318 
CROCC                 0.042   ciliary rootlet coiled-coil 
MDN1                  0.042   MDN1, midasin homolog 
MYO10                 0.042   myosin X 
KRT19                 0.038   keratin 19 
GOLGB1                0.038   golgi autoantigen, golgin subfamily b, macrogolgin ...
RBM25                 0.035   RNA binding motif protein 25 
RPGR                  0.035   retinitis pigmentosa GTPase regulator isoform C [Hom...
RP1L1                 0.035   retinitis pigmentosa 1-like 1 
TNNT2                 0.031   troponin T type 2, cardiac isoform 2 
RAD50                 0.031   RAD50 homolog isoform 2 
RAD50                 0.031   RAD50 homolog isoform 1 
ZC3H18                0.031   zinc finger CCCH-type containing 18 
TNNT2                 0.031   troponin T type 2, cardiac isoform 4 
PHF14                 0.031   PHD finger protein 14 isoform 2 
PHF14                 0.031   PHD finger protein 14 isoform 1 
RNF20                 0.028   ring finger protein 20 
LOC653061             0.028   PREDICTED: similar to Golgin subfamily A member 8-l...
ABCF1                 0.028   ATP-binding cassette, sub-family F, member 1 isoform...
ABCF1                 0.028   ATP-binding cassette, sub-family F, member 1 isoform...
TCHH                  0.028   trichohyalin 
SLC24A1               0.028   solute carrier family 24 (sodium/potassium/calcium ex...
BAZ1A                 0.028   bromodomain adjacent to zinc finger domain, 1A isofo...
BAZ1A                 0.028   bromodomain adjacent to zinc finger domain, 1A isofo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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