Guide to the Human Genome
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Name: CPLX4 Sequence: fasta or formatted (160aa) NCBI GI: 31795561
Description:

complexin 4

Referenced in:

Synapses

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         13           3
 C cysteine            1.2          2           1
 D aspartate           8.1         13           2
 E glutamate          15.0         24           4
 F phenylalanine       2.5          4           1
 G glycine             5.6          9           3
 H histidine           0.6          1           1
 I isoleucine          4.4          7           1
 K lysine              9.4         15           2
 L leucine             6.2         10           1
 M methionine          6.9         11           1
 N asparagine          3.8          6           1
 P proline             1.9          3           1
 Q glutamine           8.8         14           1
 R arginine            4.4          7           1
 S serine              4.4          7           1
 T threonine           3.8          6           1
 V valine              3.1          5           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.9          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   complexin 4 
CPLX3                 0.579   complexin 3 
CPLX1                 0.082   complexin 1 
CPLX2                 0.075   complexin 2 
CPLX2                 0.075   complexin 2 
MYH7                  0.051   myosin, heavy chain 7, cardiac muscle, beta 
RBM19                 0.051   RNA binding motif protein 19 
RBM19                 0.051   RNA binding motif protein 19 
RBM19                 0.051   RNA binding motif protein 19 
LUZP2                 0.051   leucine zipper protein 2 
MYH11                 0.048   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.048   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.048   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.048   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
TERF2IP               0.045   telomeric repeat binding factor 2, interacting prote...
PPP1R12B              0.045   protein phosphatase 1, regulatory (inhibitor) subuni...
PPP1R12B              0.045   protein phosphatase 1, regulatory (inhibitor) subunit...
STK10                 0.045   serine/threonine kinase 10 
PPP1R12B              0.041   protein phosphatase 1, regulatory (inhibitor) subuni...
PPP1R12B              0.041   protein phosphatase 1, regulatory (inhibitor) subuni...
MYO10                 0.038   myosin X 
KIF5C                 0.034   kinesin family member 5C 
C2orf39               0.034   hypothetical protein LOC92749 
RSF1                  0.034   remodeling and spacing factor 1 
CWC15                 0.034   CWC15 homolog 
ZC3H18                0.034   zinc finger CCCH-type containing 18 
INCENP                0.031   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.031   inner centromere protein antigens 135/155kDa isofor...
RBM25                 0.027   RNA binding motif protein 25 
CEP152                0.027   centrosomal protein 152kDa 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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