USP35 4677

Name: USP35	Sequence: fasta or formatted (1018aa)		NCBI GI: 148746183
Description: ubiquitin specific protease 35		Referenced in: Ubiquitin and Related Protein Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.7 78 2 C cysteine 2.9 30 2 D aspartate 4.0 41 2 E glutamate 10.4 106 5 F phenylalanine 3.6 37 2 G glycine 6.8 69 2 H histidine 2.2 22 2 I isoleucine 3.2 33 2 K lysine 4.1 42 2 L leucine 11.8 120 3 M methionine 1.5 15 1 N asparagine 2.0 20 2 P proline 6.8 69 3 Q glutamine 4.1 42 2 R arginine 7.5 76 4 S serine 8.1 82 3 T threonine 3.9 40 1 V valine 6.2 63 3 W tryptophan 1.0 10 1 Y tyrosine 2.3 23 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ubiquitin specific protease 35 USP38 0.272 ubiquitin specific peptidase 38 USP48 0.031 ubiquitin specific protease 48 isoform b USP48 0.031 ubiquitin specific protease 48 isoform a USP46 0.030 ubiquitin specific peptidase 46 isoform 2 USP46 0.030 ubiquitin specific peptidase 46 isoform 1 USP12 0.025 ubiquitin thiolesterase 12 USP21 0.023 ubiquitin-specific protease 21 USP21 0.023 ubiquitin-specific protease 21 USP3 0.023 ubiquitin thiolesterase 3 USP36 0.023 ubiquitin specific peptidase 36 LOC100288520 0.023 PREDICTED: hypothetical protein XP_002342486 LOC728379 0.022 PREDICTED: similar to deubiquitinating enzyme DUB1 ... LOC728373 0.022 PREDICTED: similar to deubiquitinating enzyme DUB1 ... LOC100287513 0.022 PREDICTED: hypothetical protein XP_002342480 USP42 0.022 ubiquitin specific peptidase 42 USP17 0.022 ubiquitin specific peptidase 17 LOC728419 0.022 PREDICTED: similar to deubiquitinating enzyme 1 [Ho... LOC728405 0.022 PREDICTED: similar to deubiquitinating enzyme 1 [Ho... LOC728400 0.022 PREDICTED: similar to deubiquitinating enzyme 1 [Ho... LOC728393 0.022 PREDICTED: similar to deubiquitinating enzyme 1 [Ho... LOC728379 0.022 PREDICTED: similar to deubiquitinating enzyme 1 [Ho... LOC728373 0.022 PREDICTED: similar to deubiquitinating enzyme 1 [Ho... LOC728369 0.022 PREDICTED: similar to deubiquitinating enzyme 3 [Ho... LOC100287478 0.022 PREDICTED: hypothetical protein XP_002342479 LOC100287441 0.022 PREDICTED: hypothetical protein XP_002342478 LOC100287205 0.022 PREDICTED: hypothetical protein XP_002342473 LOC100287404 0.022 PREDICTED: hypothetical protein XP_002342477 LOC100287364 0.022 PREDICTED: hypothetical protein XP_002342476 LOC100287178 0.022 PREDICTED: hypothetical protein XP_002342472 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.