Guide to the Human Genome
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Name: MXRA7 Sequence: fasta or formatted (177aa) NCBI GI: 56549133
Description:

transmembrane anchor protein 1 isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {170aa} transmembrane anchor protein 1 isoform 3
alt prot {204aa} transmembrane anchor protein 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            18.1         32           3
 C cysteine            0.6          1           1
 D aspartate           2.8          5           1
 E glutamate          18.1         32           3
 F phenylalanine       1.1          2           1
 G glycine            10.2         18           1
 H histidine           0.0          0           0
 I isoleucine          0.6          1           1
 K lysine              3.4          6           2
 L leucine            10.2         18           3
 M methionine          1.7          3           2
 N asparagine          0.6          1           1
 P proline            15.3         27           2
 Q glutamine           2.8          5           1
 R arginine            4.0          7           2
 S serine              5.1          9           2
 T threonine           2.8          5           1
 V valine              1.1          2           1
 W tryptophan          0.6          1           1
 Y tyrosine            1.1          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane anchor protein 1 isoform 2 
MXRA7                 0.955   transmembrane anchor protein 1 isoform 1 
MXRA7                 0.955   transmembrane anchor protein 1 isoform 3 
PELP1                 0.093   proline, glutamic acid and leucine rich protein 1 [...
TAF4                  0.090   TBP-associated factor 4 
CCDC96                0.087   coiled-coil domain containing 96 
BAI1                  0.084   brain-specific angiogenesis inhibitor 1 precursor [...
CASKIN2               0.084   cask-interacting protein 2 isoform b 
CASKIN2               0.084   cask-interacting protein 2 isoform a 
WNK2                  0.084   WNK lysine deficient protein kinase 2 
HCN2                  0.081   hyperpolarization activated cyclic nucleotide-gated...
RPGR                  0.081   retinitis pigmentosa GTPase regulator isoform C [Hom...
COL2A1                0.078   collagen, type II, alpha 1 isoform 1 precursor [Hom...
COL2A1                0.078   collagen, type II, alpha 1 isoform 2 precursor [Hom...
IRF2BP1               0.078   interferon regulatory factor 2 binding protein 1 [Ho...
NCOR2                 0.075   nuclear receptor co-repressor 2 isoform 2 
NCOR2                 0.075   nuclear receptor co-repressor 2 isoform 1 
FOXG1                 0.075   forkhead box G1 
MARCKS                0.075   myristoylated alanine-rich protein kinase C substra...
COL11A2               0.075   collagen, type XI, alpha 2 isoform 2 preproprotein ...
COL11A2               0.075   collagen, type XI, alpha 2 isoform 3 preproprotein ...
COL11A2               0.075   collagen, type XI, alpha 2 isoform 1 preproprotein ...
C17orf96              0.072   hypothetical protein LOC100170841 
SH3BP1                0.072   SH3-domain binding protein 1 
CDKN1C                0.072   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.072   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.072   cyclin-dependent kinase inhibitor 1C isoform a 
COL5A1                0.072   alpha 1 type V collagen preproprotein 
SYNJ1                 0.069   synaptojanin 1 isoform c 
HS3ST4                0.069   heparan sulfate D-glucosaminyl 3-O-sulfotransferase...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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