Guide to the Human Genome
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Name: MXRA7 Sequence: fasta or formatted (204aa) NCBI GI: 56549131
Description:

transmembrane anchor protein 1 isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {170aa} transmembrane anchor protein 1 isoform 3
alt prot {177aa} transmembrane anchor protein 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            16.7         34           3
 C cysteine            0.5          1           1
 D aspartate           3.9          8           1
 E glutamate          17.2         35           3
 F phenylalanine       2.0          4           1
 G glycine             9.8         20           1
 H histidine           0.0          0           0
 I isoleucine          0.5          1           1
 K lysine              4.9         10           2
 L leucine             9.3         19           3
 M methionine          2.9          6           2
 N asparagine          1.0          2           1
 P proline            13.2         27           2
 Q glutamine           4.4          9           1
 R arginine            3.9          8           2
 S serine              3.9          8           2
 T threonine           2.0          4           1
 V valine              2.0          4           1
 W tryptophan          0.5          1           1
 Y tyrosine            1.5          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane anchor protein 1 isoform 1 
MXRA7                 0.819   transmembrane anchor protein 1 isoform 2 
MXRA7                 0.817   transmembrane anchor protein 1 isoform 3 
PELP1                 0.078   proline, glutamic acid and leucine rich protein 1 [...
TAF4                  0.078   TBP-associated factor 4 
BAI1                  0.072   brain-specific angiogenesis inhibitor 1 precursor [...
CASKIN2               0.072   cask-interacting protein 2 isoform b 
CASKIN2               0.072   cask-interacting protein 2 isoform a 
WNK2                  0.072   WNK lysine deficient protein kinase 2 
RPGR                  0.070   retinitis pigmentosa GTPase regulator isoform C [Hom...
MAP7D1                0.070   MAP7 domain containing 1 
HCN2                  0.070   hyperpolarization activated cyclic nucleotide-gated...
COL2A1                0.067   collagen, type II, alpha 1 isoform 1 precursor [Hom...
COL2A1                0.067   collagen, type II, alpha 1 isoform 2 precursor [Hom...
FOXG1                 0.067   forkhead box G1 
IRF2BP1               0.067   interferon regulatory factor 2 binding protein 1 [Ho...
NCOR2                 0.065   nuclear receptor co-repressor 2 isoform 2 
NCOR2                 0.065   nuclear receptor co-repressor 2 isoform 1 
MARCKS                0.065   myristoylated alanine-rich protein kinase C substra...
COL11A2               0.065   collagen, type XI, alpha 2 isoform 2 preproprotein ...
COL11A2               0.065   collagen, type XI, alpha 2 isoform 3 preproprotein ...
COL11A2               0.065   collagen, type XI, alpha 2 isoform 1 preproprotein ...
C17orf96              0.062   hypothetical protein LOC100170841 
SH3BP1                0.062   SH3-domain binding protein 1 
CDKN1C                0.062   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.062   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.062   cyclin-dependent kinase inhibitor 1C isoform a 
COL5A1                0.062   alpha 1 type V collagen preproprotein 
FMN1                  0.062   formin 1 
SYNJ1                 0.059   synaptojanin 1 isoform c 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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