Search of human proteins with 55925578

Search of human proteins with 55925578

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|55925578 lymphocyte antigen 9 isoform a [Homo sapiens]
         (655 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|55925578 lymphocyte antigen 9 isoform a [Homo sapiens]            1336   0.0  
gi|75991709 lymphocyte antigen 9 isoform b [Homo sapiens]             301   1e-81
gi|4502687 CD84 molecule [Homo sapiens]                               140   3e-33
gi|226342990 SLAM family member 9 isoform 1 [Homo sapiens]            131   2e-30
gi|19923572 SLAM family member 7 [Homo sapiens]                       117   3e-26
gi|16418407 activating NK receptor precursor [Homo sapiens]           104   3e-22
gi|226342992 SLAM family member 9 isoform 2 [Homo sapiens]             71   3e-12
gi|19923195 carcinoembryonic antigen-related cell adhesion molec...    67   7e-11
gi|68161541 carcinoembryonic antigen-related cell adhesion molec...    63   7e-10
gi|7706529 CD244 natural killer cell receptor 2B4 [Homo sapiens]       62   2e-09
gi|121674801 hepatocyte cell adhesion molecule [Homo sapiens]          57   5e-08
gi|86439957 HEPACAM family member 2 isoform 1 [Homo sapiens]           55   3e-07
gi|4506969 signaling lymphocytic activation molecule family memb...    52   2e-06
gi|37700249 HEPACAM family member 2 isoform 2 [Homo sapiens]           50   5e-06
gi|98986445 carcinoembryonic antigen-related cell adhesion molec...    50   9e-06
gi|5031561 transmembrane glycoprotein A33 precursor [Homo sapiens]     48   2e-05
gi|118572606 hemicentin 1 [Homo sapiens]                               47   4e-05
gi|52317156 carcinoembryonic antigen-related cell adhesion molec...    45   2e-04
gi|148612793 carcinoembryonic antigen-related cell adhesion mole...    45   2e-04
gi|40255013 carcinoembryonic antigen-related cell adhesion molec...    45   3e-04
gi|66346706 neuronal growth regulator 1 [Homo sapiens]                 44   4e-04
gi|156071472 CD2 molecule [Homo sapiens]                               44   6e-04
gi|21314600 carcinoembryonic antigen-related cell adhesion molec...    44   6e-04
gi|9910342 SLAM family member 8 [Homo sapiens]                         44   6e-04
gi|115529482 neural cell adhesion molecule 1 isoform 2 [Homo sap...    43   0.001
gi|59939900 opioid binding protein/cell adhesion molecule-like i...    42   0.001
gi|5901930 carcinoembryonic antigen-related cell adhesion molecu...    42   0.002
gi|109240546 pregnancy specific beta-1-glycoprotein 3 [Homo sapi...    41   0.003
gi|94420689 neural cell adhesion molecule 1 isoform 1 [Homo sapi...    41   0.004
gi|115529478 neural cell adhesion molecule 1 isoform 3 [Homo sap...    41   0.004

>gi|55925578 lymphocyte antigen 9 isoform a [Homo sapiens]
          Length = 655

 Score = 1336 bits (3457), Expect = 0.0
 Identities = 655/655 (100%), Positives = 655/655 (100%)

Query: 1   MVAPKSHTDDWAPGPFSSKPQRSQLQIFSSVLQTSLLFLLMGLRASGKDSAPTVVSGILG 60
           MVAPKSHTDDWAPGPFSSKPQRSQLQIFSSVLQTSLLFLLMGLRASGKDSAPTVVSGILG
Sbjct: 1   MVAPKSHTDDWAPGPFSSKPQRSQLQIFSSVLQTSLLFLLMGLRASGKDSAPTVVSGILG 60

Query: 61  GSVTLPLNISVDTEIENVIWIGPKNALAFARPKENVTIMVKSYLGRLDITKWSYSLCISN 120
           GSVTLPLNISVDTEIENVIWIGPKNALAFARPKENVTIMVKSYLGRLDITKWSYSLCISN
Sbjct: 61  GSVTLPLNISVDTEIENVIWIGPKNALAFARPKENVTIMVKSYLGRLDITKWSYSLCISN 120

Query: 121 LTLNDAGSYKAQINQRNFEVTTEEEFTLFVYEQLQEPQVTMKSVKVSENFSCNITLMCSV 180
           LTLNDAGSYKAQINQRNFEVTTEEEFTLFVYEQLQEPQVTMKSVKVSENFSCNITLMCSV
Sbjct: 121 LTLNDAGSYKAQINQRNFEVTTEEEFTLFVYEQLQEPQVTMKSVKVSENFSCNITLMCSV 180

Query: 181 KGAEKSVLYSWTPREPHASESNGGSILTVSRTPCDPDLPYICTAQNPVSQRSSLPVHVGQ 240
           KGAEKSVLYSWTPREPHASESNGGSILTVSRTPCDPDLPYICTAQNPVSQRSSLPVHVGQ
Sbjct: 181 KGAEKSVLYSWTPREPHASESNGGSILTVSRTPCDPDLPYICTAQNPVSQRSSLPVHVGQ 240

Query: 241 FCTDPGASRGGTTGETVVGVLGEPVTLPLALPACRDTEKVVWLFNTSIISKEREEAATAD 300
           FCTDPGASRGGTTGETVVGVLGEPVTLPLALPACRDTEKVVWLFNTSIISKEREEAATAD
Sbjct: 241 FCTDPGASRGGTTGETVVGVLGEPVTLPLALPACRDTEKVVWLFNTSIISKEREEAATAD 300

Query: 301 PLIKSRDPYKNRVWVSSQDCSLKISQLKIEDAGPYHAYVCSEASSVTSMTHVTLLIYRRL 360
           PLIKSRDPYKNRVWVSSQDCSLKISQLKIEDAGPYHAYVCSEASSVTSMTHVTLLIYRRL
Sbjct: 301 PLIKSRDPYKNRVWVSSQDCSLKISQLKIEDAGPYHAYVCSEASSVTSMTHVTLLIYRRL 360

Query: 361 RKPKITWSLRHSEDGICRISLTCSVEDGGNTVMYTWTPLQKEAVVSQGESHLNVSWRSSE 420
           RKPKITWSLRHSEDGICRISLTCSVEDGGNTVMYTWTPLQKEAVVSQGESHLNVSWRSSE
Sbjct: 361 RKPKITWSLRHSEDGICRISLTCSVEDGGNTVMYTWTPLQKEAVVSQGESHLNVSWRSSE 420

Query: 421 NHPNLTCTASNPVSRSSHQFLSENICSGPERNTKLWIGLFLMVCLLCVGIFSWCIWKRKG 480
           NHPNLTCTASNPVSRSSHQFLSENICSGPERNTKLWIGLFLMVCLLCVGIFSWCIWKRKG
Sbjct: 421 NHPNLTCTASNPVSRSSHQFLSENICSGPERNTKLWIGLFLMVCLLCVGIFSWCIWKRKG 480

Query: 481 RCSVPAFCSSQAEAPADTPEPTAGHTLYSVLSQGYEKLDTPLRPARQQPTPTSDSSSDSN 540
           RCSVPAFCSSQAEAPADTPEPTAGHTLYSVLSQGYEKLDTPLRPARQQPTPTSDSSSDSN
Sbjct: 481 RCSVPAFCSSQAEAPADTPEPTAGHTLYSVLSQGYEKLDTPLRPARQQPTPTSDSSSDSN 540

Query: 541 LTTEEDEDRPEVHKPISGRYEVFDQVTQEGAGHDPAPEGQADYDPVTPYVTEVESVVGEN 600
           LTTEEDEDRPEVHKPISGRYEVFDQVTQEGAGHDPAPEGQADYDPVTPYVTEVESVVGEN
Sbjct: 541 LTTEEDEDRPEVHKPISGRYEVFDQVTQEGAGHDPAPEGQADYDPVTPYVTEVESVVGEN 600

Query: 601 TMYAQVFNLQGKTPVSQKEESSATIYCSIRKPQVVPPPQQNDLEIPESPTYENFT 655
           TMYAQVFNLQGKTPVSQKEESSATIYCSIRKPQVVPPPQQNDLEIPESPTYENFT
Sbjct: 601 TMYAQVFNLQGKTPVSQKEESSATIYCSIRKPQVVPPPQQNDLEIPESPTYENFT 655


>gi|75991709 lymphocyte antigen 9 isoform b [Homo sapiens]
          Length = 193

 Score =  301 bits (771), Expect = 1e-81
 Identities = 156/168 (92%), Positives = 157/168 (93%), Gaps = 4/168 (2%)

Query: 1   MVAPKSHTDDWAPGPFSSKPQRSQLQIFSSVLQTSLLFLLMGLRASGKDSAPTVVSGILG 60
           MVAPKSHTDDWAPGPFSSKPQRSQLQIFSSVLQTSLLFLLMGLRASGKDSAPTVVSGILG
Sbjct: 1   MVAPKSHTDDWAPGPFSSKPQRSQLQIFSSVLQTSLLFLLMGLRASGKDSAPTVVSGILG 60

Query: 61  GSVTLPLNISVDTEIENVIWIGPKNALAFARPKENVTIMVKSYLGRLDITKWSYSLCISN 120
           GSVTLPLNISVDTEIENVIWIGPKNALAFARPKENVTIMVKSYLGRLDITKWSYSLCISN
Sbjct: 61  GSVTLPLNISVDTEIENVIWIGPKNALAFARPKENVTIMVKSYLGRLDITKWSYSLCISN 120

Query: 121 LTLNDAGSYKAQINQRNFEVTTEEEFTLFVYEQLQEPQVTMKSVKVSE 168
           LTLNDAGSYKAQINQRNFEVTTEEEFTLFVY     P +   SV V E
Sbjct: 121 LTLNDAGSYKAQINQRNFEVTTEEEFTLFVY----APFIEKLSVHVIE 164



 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 5/109 (4%)

Query: 250 GGTTGETVV-GVLGEPVTLPLALPACRDTEKVVWLFNTSIISKEREEAATADPLIKSRDP 308
           G  +  TVV G+LG  VTLPL +    + E V+W+   + ++  R +      ++KS   
Sbjct: 47  GKDSAPTVVSGILGGSVTLPLNISVDTEIENVIWIGPKNALAFARPK-ENVTIMVKS--- 102

Query: 309 YKNRVWVSSQDCSLKISQLKIEDAGPYHAYVCSEASSVTSMTHVTLLIY 357
           Y  R+ ++    SL IS L + DAG Y A +      VT+    TL +Y
Sbjct: 103 YLGRLDITKWSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVY 151


>gi|4502687 CD84 molecule [Homo sapiens]
          Length = 328

 Score =  140 bits (354), Expect = 3e-33
 Identities = 97/269 (36%), Positives = 148/269 (55%), Gaps = 27/269 (10%)

Query: 36  LLFLLMGLRASGKDSAPTVVSGILGGSVTLPLNISVDTEIENVIWIGPKNALAFARPKEN 95
           LL L     A+GKDS    V+GILG SVT P+NI    +++ + W   K ++A+  P ++
Sbjct: 10  LLCLQTWPEAAGKDSEIFTVNGILGESVTFPVNIQEPRQVKIIAWTS-KTSVAYVTPGDS 68

Query: 96  -----VTIMVKSYLGRLDITKWSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFV 150
                VT+  ++Y  R+     +Y+L IS+L + DAG YKA IN +    TT + + L +
Sbjct: 69  ETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKADINTQADPYTTTKRYNLQI 128

Query: 151 YEQLQEPQVTMKSVKVSENFSCNITLMCSVKGAEKSVLYSWTPREPHASESNGGSILTVS 210
           Y +L +P++T +S+  S N +CN+TL CSV+  EK+V Y+W+P          G++L + 
Sbjct: 129 YRRLGKPKIT-QSLMASVNSTCNVTLTCSVEKEEKNVTYNWSPL------GEEGNVLQIF 181

Query: 211 RTPCDPDLPYICTAQNPVSQRSSLPVHVGQFCTDPGASRGGTTGET-VVGVLGEPVTLPL 269
           +TP D +L Y CTAQNPVS  S   +   Q C D   + G  T  T ++ VL     L L
Sbjct: 182 QTPEDQELTYTCTAQNPVSNNSD-SISARQLCAD--IAMGFRTHHTGLLSVLAMFFLLVL 238

Query: 270 ALPACRDTEKVVWLFNTSIISKEREEAAT 298
            L +       V+LF    + K R++AA+
Sbjct: 239 ILSS-------VFLFR---LFKRRQDAAS 257



 Score =  120 bits (302), Expect = 3e-27
 Identities = 73/231 (31%), Positives = 114/231 (49%), Gaps = 13/231 (5%)

Query: 256 TVVGVLGEPVTLPLALPACRDTEKVVWLFNTSIISKEREEAATADPLIKSRDPYKNRVWV 315
           TV G+LGE VT P+ +   R  + + W   TS+      ++ TA  +  +   Y  R+  
Sbjct: 28  TVNGILGESVTFPVNIQEPRQVKIIAWTSKTSVAYVTPGDSETAPVVTVTHRNYYERIHA 87

Query: 316 SSQDCSLKISQLKIEDAGPYHAYVCSEASSVTSMTHVTLLIYRRLRKPKITWSLRHSEDG 375
              + +L IS L++EDAG Y A + ++A   T+     L IYRRL KPKIT SL  S + 
Sbjct: 88  LGPNYNLVISDLRMEDAGDYKADINTQADPYTTTKRYNLQIYRRLGKPKITQSLMASVNS 147

Query: 376 ICRISLTCSVEDGGNTVMYTWTPLQKEAVVSQGESHLNVSWRSSENHPNLTCTASNPVSR 435
            C ++LTCSVE     V Y W+PL +E  V      L +     +     TCTA NPVS 
Sbjct: 148 TCNVTLTCSVEKEEKNVTYNWSPLGEEGNV------LQIFQTPEDQELTYTCTAQNPVSN 201

Query: 436 SSHQFLSENICSGPERNTKLW-------IGLFLMVCLLCVGIFSWCIWKRK 479
           +S    +  +C+      +         + +F ++ L+   +F + ++KR+
Sbjct: 202 NSDSISARQLCADIAMGFRTHHTGLLSVLAMFFLLVLILSSVFLFRLFKRR 252


>gi|226342990 SLAM family member 9 isoform 1 [Homo sapiens]
          Length = 289

 Score =  131 bits (330), Expect = 2e-30
 Identities = 75/195 (38%), Positives = 109/195 (55%), Gaps = 5/195 (2%)

Query: 55  VSGILGGSVTLPLNISVDTEIENVIWIGPKNALAFARPKEN--VTIMVKS--YLGRLDIT 110
           V  +L  S++LPL I  D E+EN+IW   K+       KE    TIMV +  Y G++   
Sbjct: 30  VVAVLQESISLPLEIPPDEEVENIIWSSHKSLATVVPGKEGHPATIMVTNPHYQGQVSFL 89

Query: 111 KWSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYEQLQEPQVTMKSVKVSENF 170
             SYSL ISNL+  D+G Y+AQ+N R  +++T +++ + VY  L EPQ+T+      E  
Sbjct: 90  DPSYSLHISNLSWEDSGLYQAQVNLRTSQISTMQQYNICVYRWLSEPQITVNFESSGEG- 148

Query: 171 SCNITLMCSVKGAEKSVLYSWTPREPHASESNGGSILTVSRTPCDPDLPYICTAQNPVSQ 230
           +C+++L+CSV+ A   + YSW  R       + G +L+ S  P D  L Y C A NP+S 
Sbjct: 149 ACSMSLVCSVEKAGMDMTYSWLSRGDSTYTFHEGPVLSTSWRPGDSALSYTCRANNPISN 208

Query: 231 RSSLPVHVGQFCTDP 245
            SS P+  G F  DP
Sbjct: 209 VSSCPIPDGPFYADP 223



 Score =  103 bits (256), Expect = 7e-22
 Identities = 57/183 (31%), Positives = 91/183 (49%)

Query: 255 ETVVGVLGEPVTLPLALPACRDTEKVVWLFNTSIISKEREEAATADPLIKSRDPYKNRVW 314
           E VV VL E ++LPL +P   + E ++W  + S+ +    +      ++ +   Y+ +V 
Sbjct: 28  EEVVAVLQESISLPLEIPPDEEVENIIWSSHKSLATVVPGKEGHPATIMVTNPHYQGQVS 87

Query: 315 VSSQDCSLKISQLKIEDAGPYHAYVCSEASSVTSMTHVTLLIYRRLRKPKITWSLRHSED 374
                 SL IS L  ED+G Y A V    S +++M    + +YR L +P+IT +   S +
Sbjct: 88  FLDPSYSLHISNLSWEDSGLYQAQVNLRTSQISTMQQYNICVYRWLSEPQITVNFESSGE 147

Query: 375 GICRISLTCSVEDGGNTVMYTWTPLQKEAVVSQGESHLNVSWRSSENHPNLTCTASNPVS 434
           G C +SL CSVE  G  + Y+W               L+ SWR  ++  + TC A+NP+S
Sbjct: 148 GACSMSLVCSVEKAGMDMTYSWLSRGDSTYTFHEGPVLSTSWRPGDSALSYTCRANNPIS 207

Query: 435 RSS 437
             S
Sbjct: 208 NVS 210


>gi|19923572 SLAM family member 7 [Homo sapiens]
          Length = 335

 Score =  117 bits (294), Expect = 3e-26
 Identities = 78/241 (32%), Positives = 123/241 (51%), Gaps = 12/241 (4%)

Query: 246 GASRGGTTGETVVGVLGEPVTLPLALPACRDTEKVVWLFNTSIISKEREEAATADPLIKS 305
           G++  G   E +VG +G  VT PL     +  + +VW FNT+ +   + E  T   +I +
Sbjct: 19  GSAASGPVKE-LVGSVGGAVTFPLKSKV-KQVDSIVWTFNTTPLVTIQPEGGT---IIVT 73

Query: 306 RDPYKNRVWVSSQDCSLKISQLKIEDAGPYHAYVCSEASSVTSMTHVTLLIYRRLRKPKI 365
           ++  + RV       SLK+S+LK  D+G Y+  + S +    S     L +Y  L KPK+
Sbjct: 74  QNRNRERVDFPDGGYSLKLSKLKKNDSGIYYVGIYSSSLQQPSTQEYVLHVYEHLSKPKV 133

Query: 366 TWSLRHSEDGICRISLTCSVEDGGNTVMYTWTPLQKEAVVSQGESHLNVSWRSSENHPNL 425
           T  L+ +++G C  +LTC +E G   V+YTW  L + A  S   S L +SWR  E+    
Sbjct: 134 TMGLQSNKNGTCVTNLTCCMEHGEEDVIYTWKALGQAANESHNGSILPISWRWGESDMTF 193

Query: 426 TCTASNPVSRS-SHQFLSENICSG----PERNTKLWIGLF--LMVCLLCVGIFSWCIWKR 478
            C A NPVSR+ S   L+  +C G    P+ +  L   L   L++ L  +G+F W + + 
Sbjct: 194 ICVARNPVSRNFSSPILARKLCEGAADDPDSSMVLLCLLLVPLLLSLFVLGLFLWFLKRE 253

Query: 479 K 479
           +
Sbjct: 254 R 254



 Score =  114 bits (284), Expect = 4e-25
 Identities = 71/236 (30%), Positives = 125/236 (52%), Gaps = 5/236 (2%)

Query: 35  SLLFLLMGLRASGKDSAPTVVSGILGGSVTLPLNISVDTEIENVIWIGPKNALAFARPKE 94
           +L+++L  L  S        + G +GG+VT PL   V  ++++++W      L   +P+ 
Sbjct: 9   TLIYILWQLTGSAASGPVKELVGSVGGAVTFPLKSKVK-QVDSIVWTFNTTPLVTIQPEG 67

Query: 95  NVTIMVKSY-LGRLDITKWSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYEQ 153
              I+ ++    R+D     YSL +S L  ND+G Y   I   + +  + +E+ L VYE 
Sbjct: 68  GTIIVTQNRNRERVDFPDGGYSLKLSKLKKNDSGIYYVGIYSSSLQQPSTQEYVLHVYEH 127

Query: 154 LQEPQVTMKSVKVSENFSCNITLMCSVKGAEKSVLYSWTPREPHASESNGGSILTVSRTP 213
           L +P+VTM  ++ ++N +C   L C ++  E+ V+Y+W      A+ES+ GSIL +S   
Sbjct: 128 LSKPKVTM-GLQSNKNGTCVTNLTCCMEHGEEDVIYTWKALGQAANESHNGSILPISWRW 186

Query: 214 CDPDLPYICTAQNPVSQRSSLPVHVGQFCTDPGASRGGTTGETVVGVLGEPVTLPL 269
            + D+ +IC A+NPVS+  S P+   + C   GA+    +   ++ +L  P+ L L
Sbjct: 187 GESDMTFICVARNPVSRNFSSPILARKLC--EGAADDPDSSMVLLCLLLVPLLLSL 240


>gi|16418407 activating NK receptor precursor [Homo sapiens]
          Length = 331

 Score =  104 bits (259), Expect = 3e-22
 Identities = 79/251 (31%), Positives = 122/251 (48%), Gaps = 14/251 (5%)

Query: 241 FCTDPG--ASRGGTTGETVVGVLGEPVTLPLALPACRDTEKVVWLFN-TSIISKEREEAA 297
           FC  PG   S+   T   V G+LGE VTLPL  PA      + WLFN TS+      E  
Sbjct: 12  FCFGPGNVVSQSSLTPLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHE-- 69

Query: 298 TADPLIKSRDPYKNRVWVSSQDCSLKISQLKIEDAGPYHAYVCSEASSVTSMTHVTLLIY 357
           T  P I   +P + +    +Q  SL++S LK+ED G Y A + ++ S+   ++  TL I 
Sbjct: 70  TKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTGSYRAQISTKTSA--KLSSYTLRIL 127

Query: 358 RRLRKPKITWSLRHSEDGICRISLTCSVEDGGNTVMYTWTPLQKEAVVSQGESHLNVSWR 417
           R+LR  ++T   +  ++  C + LTCSVED  + V + W  L         + +L VSW 
Sbjct: 128 RQLRNIQVTNHSQLFQNMTCELHLTCSVEDADDNVSFRWEALGN---TLSSQPNLTVSWD 184

Query: 418 SS-ENHPNLTCTASNPVSRSSHQFLSENICSGPE---RNTKLWIGLFLMVCLLCVGIFSW 473
               +  + TC A N VS  S    ++ +C   +    +TK+ + +   +C++   I   
Sbjct: 185 PRISSEQDYTCIAENAVSNLSFSVSAQKLCEDVKIQYTDTKMILFMVSGICIVFGFIILL 244

Query: 474 CIWKRKGRCSV 484
            +  RK R S+
Sbjct: 245 LLVLRKRRDSL 255



 Score = 94.0 bits (232), Expect = 4e-19
 Identities = 74/218 (33%), Positives = 110/218 (50%), Gaps = 16/218 (7%)

Query: 35  SLLFLLM---GLRASGKDSAPTVVSGILGGSVTLPLNISVDTEIENVIWIGPKNALAFAR 91
           SLLF+     G   S     P +V+GILG SVTLPL      ++  + W+  + +LAF  
Sbjct: 7   SLLFVFCFGPGNVVSQSSLTPLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIV 66

Query: 92  PKE----NVTIMVKSYLGRLDITKWSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFT 147
           P E     + +       RL+ T+ SYSL +SNL + D GSY+AQI+ +     +   +T
Sbjct: 67  PHETKSPEIHVTNPKQGKRLNFTQ-SYSLQLSNLKMEDTGSYRAQISTKTSAKLS--SYT 123

Query: 148 LFVYEQLQEPQVTMKSVKVSENFSCNITLMCSVKGAEKSVLYSWTPREPHASESNGGSIL 207
           L +  QL+  QVT  S ++ +N +C + L CSV+ A+ +V + W   E   +  +    L
Sbjct: 124 LRILRQLRNIQVTNHS-QLFQNMTCELHLTCSVEDADDNVSFRW---EALGNTLSSQPNL 179

Query: 208 TVSRTP-CDPDLPYICTAQNPVSQRSSLPVHVGQFCTD 244
           TVS  P    +  Y C A+N VS   S  V   + C D
Sbjct: 180 TVSWDPRISSEQDYTCIAENAVS-NLSFSVSAQKLCED 216


>gi|226342992 SLAM family member 9 isoform 2 [Homo sapiens]
          Length = 198

 Score = 71.2 bits (173), Expect = 3e-12
 Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 4/101 (3%)

Query: 55  VSGILGGSVTLPLNISVDTEIENVIWIGPKNALAFARPKEN--VTIMVKS--YLGRLDIT 110
           V  +L  S++LPL I  D E+EN+IW   K+       KE    TIMV +  Y G++   
Sbjct: 30  VVAVLQESISLPLEIPPDEEVENIIWSSHKSLATVVPGKEGHPATIMVTNPHYQGQVSFL 89

Query: 111 KWSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVY 151
             SYSL ISNL+  D+G Y+AQ+N R  +++T +++ + VY
Sbjct: 90  DPSYSLHISNLSWEDSGLYQAQVNLRTSQISTMQQYNICVY 130



 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 29/103 (28%), Positives = 50/103 (48%)

Query: 255 ETVVGVLGEPVTLPLALPACRDTEKVVWLFNTSIISKEREEAATADPLIKSRDPYKNRVW 314
           E VV VL E ++LPL +P   + E ++W  + S+ +    +      ++ +   Y+ +V 
Sbjct: 28  EEVVAVLQESISLPLEIPPDEEVENIIWSSHKSLATVVPGKEGHPATIMVTNPHYQGQVS 87

Query: 315 VSSQDCSLKISQLKIEDAGPYHAYVCSEASSVTSMTHVTLLIY 357
                 SL IS L  ED+G Y A V    S +++M    + +Y
Sbjct: 88  FLDPSYSLHISNLSWEDSGLYQAQVNLRTSQISTMQQYNICVY 130


>gi|19923195 carcinoembryonic antigen-related cell adhesion molecule
           1 isoform 1 precursor [Homo sapiens]
          Length = 526

 Score = 66.6 bits (161), Expect = 7e-11
 Identities = 93/395 (23%), Positives = 152/395 (38%), Gaps = 65/395 (16%)

Query: 115 SLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYEQLQEPQVTMKSVKVSENFSCNI 174
           SL I N+T ND G Y  Q+ + +  V  E      VY +L +P ++  +    E+    +
Sbjct: 106 SLLIQNVTQNDTGFYTLQVIKSDL-VNEEATGQFHVYPELPKPSISSNNSNPVEDKDA-V 163

Query: 175 TLMCSVKGAEKSVLYSWT-----PREPHASESNGGSILTVSRTPCDPDLPYICTAQNPVS 229
              C  +  + + L+ W      P  P    SNG   LT+     +   PY C  QNPVS
Sbjct: 164 AFTCEPETQDTTYLW-WINNQSLPVSPRLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVS 222

Query: 230 QRSSLPV--HVGQFCTDPGASRGGTTGETVVGVLGEPVTLPLALPACRDTEKVVWLFNTS 287
              S PV  +V      P  S   T         G  ++L     A     +  WL N +
Sbjct: 223 ANRSDPVTLNVTYGPDTPTISPSDTYYRP-----GANLSLS-CYAASNPPAQYSWLINGT 276

Query: 288 IISKEREEAATADPLIKSRDPYKNRVWVSSQDCSLKISQLKIEDAGPYHAYVCSEASSVT 347
                +E                           L I  + + ++G   +Y C   +SVT
Sbjct: 277 FQQSTQE---------------------------LFIPNITVNNSG---SYTCHANNSVT 306

Query: 348 --SMTHVTLLIYRRL----RKPKITWSLRHSEDGICRISLTCSVEDGGNTVMYTW----T 397
             + T V  +I   L     KP+I  S          ++LTCS  D G ++ + +     
Sbjct: 307 GCNRTTVKTIIVTELSPVVAKPQIKASKTTVTGDKDSVNLTCSTNDTGISIRWFFKNQSL 366

Query: 398 PLQKEAVVSQGESHLNVSWRSSENHPNLTCTASNPVSRSSHQ--FLSENICSGPERN--- 452
           P  +   +SQG + L+++    E+     C   NP+S++      L+ N  + P+ N   
Sbjct: 367 PSSERMKLSQGNTTLSINPVKREDAGTYWCEVFNPISKNQSDPIMLNVNYNALPQENGLS 426

Query: 453 ----TKLWIGLFLMVCLLCVGIFSWCIWKRKGRCS 483
                 + IG+  +V L+ V +  +  + + GR S
Sbjct: 427 PGAIAGIVIGVVALVALIAVALACFLHFGKTGRAS 461



 Score = 31.6 bits (70), Expect = 2.4
 Identities = 34/144 (23%), Positives = 52/144 (36%), Gaps = 15/144 (10%)

Query: 319 DCSLKISQLKIEDAGPYHAYVCSEA---SSVTSMTHVTLLIYRRLRKPKITWSLRHSEDG 375
           + SL I  +   D G Y   V          T   HV    Y  L KP I+ +  +  + 
Sbjct: 104 NASLLIQNVTQNDTGFYTLQVIKSDLVNEEATGQFHV----YPELPKPSISSNNSNPVED 159

Query: 376 ICRISLTCSVEDGGNTVMYTW------TPLQKEAVVSQGESHLNVSWRSSENHPNLTCTA 429
              ++ TC  E    T  Y W       P+     +S G   L +   +  +     C  
Sbjct: 160 KDAVAFTCEPETQDTT--YLWWINNQSLPVSPRLQLSNGNRTLTLLSVTRNDTGPYECEI 217

Query: 430 SNPVSRSSHQFLSENICSGPERNT 453
            NPVS +    ++ N+  GP+  T
Sbjct: 218 QNPVSANRSDPVTLNVTYGPDTPT 241



 Score = 30.4 bits (67), Expect = 5.4
 Identities = 54/246 (21%), Positives = 88/246 (35%), Gaps = 39/246 (15%)

Query: 106 RLDITKWSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYEQLQEPQVTMKSVK 165
           RL ++  + +L + ++T ND G Y+ +I Q        +  TL V      P ++     
Sbjct: 190 RLQLSNGNRTLTLLSVTRNDTGPYECEI-QNPVSANRSDPVTLNVTYGPDTPTISPSDTY 248

Query: 166 VSENFSCNITLMCSVKGAEKSVLYSWTPREPHASESNGGSILTVSRTPCDPDLPYICTAQ 225
                  N++L C    +     YSW         +     L +     +    Y C A 
Sbjct: 249 YRPG--ANLSLSCYA-ASNPPAQYSWLINGTFQQSTQE---LFIPNITVNNSGSYTCHAN 302

Query: 226 NPVSQRSSLPVHVGQFCTDPGASRGGTTGETVVGVLGEPVTLPLALPACRDTEKVVWLFN 285
           N V+                G +R  TT +T++     PV     + A + T        
Sbjct: 303 NSVT----------------GCNR--TTVKTIIVTELSPVVAKPQIKASKTTV------- 337

Query: 286 TSIISKEREEAATADPLIKSRDPYKN-------RVWVSSQDCSLKISQLKIEDAGPYHAY 338
           T          +T D  I  R  +KN       R+ +S  + +L I+ +K EDAG Y   
Sbjct: 338 TGDKDSVNLTCSTNDTGISIRWFFKNQSLPSSERMKLSQGNTTLSINPVKREDAGTYWCE 397

Query: 339 VCSEAS 344
           V +  S
Sbjct: 398 VFNPIS 403


>gi|68161541 carcinoembryonic antigen-related cell adhesion molecule
           1 isoform 2 precursor [Homo sapiens]
          Length = 464

 Score = 63.2 bits (152), Expect = 7e-10
 Identities = 90/382 (23%), Positives = 146/382 (38%), Gaps = 65/382 (17%)

Query: 115 SLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYEQLQEPQVTMKSVKVSENFSCNI 174
           SL I N+T ND G Y  Q+ + +  V  E      VY +L +P ++  +    E+    +
Sbjct: 106 SLLIQNVTQNDTGFYTLQVIKSDL-VNEEATGQFHVYPELPKPSISSNNSNPVEDKDA-V 163

Query: 175 TLMCSVKGAEKSVLYSWT-----PREPHASESNGGSILTVSRTPCDPDLPYICTAQNPVS 229
              C  +  + + L+ W      P  P    SNG   LT+     +   PY C  QNPVS
Sbjct: 164 AFTCEPETQDTTYLW-WINNQSLPVSPRLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVS 222

Query: 230 QRSSLPV--HVGQFCTDPGASRGGTTGETVVGVLGEPVTLPLALPACRDTEKVVWLFNTS 287
              S PV  +V      P  S   T         G  ++L     A     +  WL N +
Sbjct: 223 ANRSDPVTLNVTYGPDTPTISPSDTYYRP-----GANLSLS-CYAASNPPAQYSWLINGT 276

Query: 288 IISKEREEAATADPLIKSRDPYKNRVWVSSQDCSLKISQLKIEDAGPYHAYVCSEASSVT 347
                +E                           L I  + + ++G   +Y C   +SVT
Sbjct: 277 FQQSTQE---------------------------LFIPNITVNNSG---SYTCHANNSVT 306

Query: 348 --SMTHVTLLIYRRL----RKPKITWSLRHSEDGICRISLTCSVEDGGNTVMYTW----T 397
             + T V  +I   L     KP+I  S          ++LTCS  D G ++ + +     
Sbjct: 307 GCNRTTVKTIIVTELSPVVAKPQIKASKTTVTGDKDSVNLTCSTNDTGISIRWFFKNQSL 366

Query: 398 PLQKEAVVSQGESHLNVSWRSSENHPNLTCTASNPVSRSSHQ--FLSENICSGPERN--- 452
           P  +   +SQG + L+++    E+     C   NP+S++      L+ N  + P+ N   
Sbjct: 367 PSSERMKLSQGNTTLSINPVKREDAGTYWCEVFNPISKNQSDPIMLNVNYNALPQENGLS 426

Query: 453 ----TKLWIGLFLMVCLLCVGI 470
                 + IG+  +V L+ V +
Sbjct: 427 PGAIAGIVIGVVALVALIAVAL 448



 Score = 41.2 bits (95), Expect = 0.003
 Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 14/170 (8%)

Query: 116 LCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYEQ---LQEPQVTMKSVKVSENFSC 172
           L I N+T+N++GSY    N            T+ V E    + +PQ+      V+ +   
Sbjct: 284 LFIPNITVNNSGSYTCHANNSVTGCNRTTVKTIIVTELSPVVAKPQIKASKTTVTGDKD- 342

Query: 173 NITLMCSVKGAEKSVLYSWTPREPHASE----SNGGSILTVSRTPCDPDLPYICTAQNPV 228
           ++ L CS      S+ + +  +   +SE    S G + L+++    +    Y C   NP+
Sbjct: 343 SVNLTCSTNDTGISIRWFFKNQSLPSSERMKLSQGNTTLSINPVKREDAGTYWCEVFNPI 402

Query: 229 SQRSSLP----VHVGQFCTDPGASRGGTTGETVVGVLGEPVTLPLALPAC 274
           S+  S P    V+      + G S G   G  V+GV+     + +AL AC
Sbjct: 403 SKNQSDPIMLNVNYNALPQENGLSPGAIAG-IVIGVVALVALIAVAL-AC 450



 Score = 31.6 bits (70), Expect = 2.4
 Identities = 34/144 (23%), Positives = 52/144 (36%), Gaps = 15/144 (10%)

Query: 319 DCSLKISQLKIEDAGPYHAYVCSEA---SSVTSMTHVTLLIYRRLRKPKITWSLRHSEDG 375
           + SL I  +   D G Y   V          T   HV    Y  L KP I+ +  +  + 
Sbjct: 104 NASLLIQNVTQNDTGFYTLQVIKSDLVNEEATGQFHV----YPELPKPSISSNNSNPVED 159

Query: 376 ICRISLTCSVEDGGNTVMYTW------TPLQKEAVVSQGESHLNVSWRSSENHPNLTCTA 429
              ++ TC  E    T  Y W       P+     +S G   L +   +  +     C  
Sbjct: 160 KDAVAFTCEPETQDTT--YLWWINNQSLPVSPRLQLSNGNRTLTLLSVTRNDTGPYECEI 217

Query: 430 SNPVSRSSHQFLSENICSGPERNT 453
            NPVS +    ++ N+  GP+  T
Sbjct: 218 QNPVSANRSDPVTLNVTYGPDTPT 241



 Score = 30.4 bits (67), Expect = 5.4
 Identities = 54/246 (21%), Positives = 88/246 (35%), Gaps = 39/246 (15%)

Query: 106 RLDITKWSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYEQLQEPQVTMKSVK 165
           RL ++  + +L + ++T ND G Y+ +I Q        +  TL V      P ++     
Sbjct: 190 RLQLSNGNRTLTLLSVTRNDTGPYECEI-QNPVSANRSDPVTLNVTYGPDTPTISPSDTY 248

Query: 166 VSENFSCNITLMCSVKGAEKSVLYSWTPREPHASESNGGSILTVSRTPCDPDLPYICTAQ 225
                  N++L C    +     YSW         +     L +     +    Y C A 
Sbjct: 249 YRPG--ANLSLSCYA-ASNPPAQYSWLINGTFQQSTQE---LFIPNITVNNSGSYTCHAN 302

Query: 226 NPVSQRSSLPVHVGQFCTDPGASRGGTTGETVVGVLGEPVTLPLALPACRDTEKVVWLFN 285
           N V+                G +R  TT +T++     PV     + A + T        
Sbjct: 303 NSVT----------------GCNR--TTVKTIIVTELSPVVAKPQIKASKTTV------- 337

Query: 286 TSIISKEREEAATADPLIKSRDPYKN-------RVWVSSQDCSLKISQLKIEDAGPYHAY 338
           T          +T D  I  R  +KN       R+ +S  + +L I+ +K EDAG Y   
Sbjct: 338 TGDKDSVNLTCSTNDTGISIRWFFKNQSLPSSERMKLSQGNTTLSINPVKREDAGTYWCE 397

Query: 339 VCSEAS 344
           V +  S
Sbjct: 398 VFNPIS 403


>gi|7706529 CD244 natural killer cell receptor 2B4 [Homo sapiens]
          Length = 365

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 6/165 (3%)

Query: 318 QDCSLKISQLKIEDAGPYHAYVCSEASSVTSMTHVTLLIYRRLRKPKITWSLRHSEDGIC 377
           ++ SL I   + +D+G Y   V S +  V + T   + ++ ++ KP++    +  + G C
Sbjct: 88  KNLSLLIKAAQQQDSGLYCLEVTSISGKVQTATF-QVFVFDKVEKPRLQGQGKILDRGRC 146

Query: 378 RISLTCSVEDGGNTVMYTWTPLQKEAVVSQGESHLNVSWRSSENHPNLTCTASNPVSRSS 437
           +++L+C V   GN V Y W    K    +   ++L+     +  H   TC  SNPVS  S
Sbjct: 147 QVALSCLVSRDGN-VSYAWYRGSKLIQTAGNLTYLDEEVDINGTH-TYTCNVSNPVSWES 204

Query: 438 HQFLSENICSGPERNTKLWIGLFLMVCL--LCVGIFS-WCIWKRK 479
           H       C    +  + W  L ++V L  L +G  + +C+W+RK
Sbjct: 205 HTLNLTQDCQNAHQEFRFWPFLVIIVILSALFLGTLACFCVWRRK 249


>gi|121674801 hepatocyte cell adhesion molecule [Homo sapiens]
          Length = 416

 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 43/130 (33%), Positives = 65/130 (50%), Gaps = 8/130 (6%)

Query: 115 SLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYEQLQEPQVTMKSVKVSENFSCNI 174
           SL +S+L L D G+Y+ +I+  +   T E+   L V   +  PQV + S  V E  S   
Sbjct: 106 SLLLSDLQLADEGTYEVEISITDDTFTGEKTINLTVDVPISRPQVLVASTTVLE-LSEAF 164

Query: 175 TLMCSVKGAEKSVLYSWTPR-EPHASESN-----GGSILTVSRTPCDPDLPYICTAQNPV 228
           TL CS +   K   Y+W    +P  ++S         +LT++R   + D  Y C  +NP+
Sbjct: 165 TLNCSHENGTKPS-YTWLKDGKPLLNDSRMLLSPDQKVLTITRVLMEDDDLYSCMVENPI 223

Query: 229 SQRSSLPVHV 238
           SQ  SLPV +
Sbjct: 224 SQGRSLPVKI 233



 Score = 38.1 bits (87), Expect = 0.026
 Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 26/189 (13%)

Query: 306 RDPYKNRVWVSSQDCSLKISQLKIEDAGPYHAYVCSEASSVTSMTHVTLLIYRRLRKPKI 365
           R  Y++R+ +  ++ SL +S L++ D G Y   +     + T    + L +   + +P++
Sbjct: 92  RPDYRDRIRLF-ENGSLLLSDLQLADEGTYEVEISITDDTFTGEKTINLTVDVPISRPQV 150

Query: 366 ----TWSLRHSEDGICRISLTCSVEDGGNTVMYTW----TPLQKEA--VVSQGESHLNVS 415
               T  L  SE      +L CS E+ G    YTW     PL  ++  ++S  +  L ++
Sbjct: 151 LVASTTVLELSE----AFTLNCSHEN-GTKPSYTWLKDGKPLLNDSRMLLSPDQKVLTIT 205

Query: 416 WRSSENHPNLTCTASNPVSRSSHQFLSENICSGPERNTKLWI-----GLFLMVCLLCVGI 470
               E+    +C   NP+S+     +   +     R + L+I     G+FL+V L+ V  
Sbjct: 206 RVLMEDDDLYSCMVENPISQGRSLPVKITV----YRRSSLYIILSTGGIFLLVTLVTV-C 260

Query: 471 FSWCIWKRK 479
             W   KRK
Sbjct: 261 ACWKPSKRK 269


>gi|86439957 HEPACAM family member 2 isoform 1 [Homo sapiens]
          Length = 462

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 59/252 (23%), Positives = 110/252 (43%), Gaps = 18/252 (7%)

Query: 31  VLQTSLLFLLMGLRASGKDSAPT-VVSGILGGSVTLPLNISVDTEIENV--IWI--GPKN 85
           V Q  +  LL G  +  K + P+  V G+ G ++ LP++    T   ++  IW+   P  
Sbjct: 16  VFQCKIYLLLFGACSGLKVTVPSHTVHGVRGQALYLPVHYGFHTPASDIQIIWLFERPHT 75

Query: 86  ALAFARPKENVTIMVK-SYLGRLDITKWSYSLCISNLTLNDAGSYKAQIN-QRNFEVTTE 143
              +     N +++    Y  +  +   + SL I+ L   D G+Y  ++N Q N  ++  
Sbjct: 76  MPKYLLGSVNKSVVPDLEYQHKFTMMPPNASLLINPLQFPDEGNYIVKVNIQGNGTLSAS 135

Query: 144 EEFTLFVYEQLQEPQVTMKSVKVSENFSCNITLMCSVKGAEKSVLYSW--TPREPHASE- 200
           ++  + V + + +P V +     +  +  N+TL C V+G  + + Y W    R  H S  
Sbjct: 136 QKIQVTVDDPVTKPVVQIHPPSGAVEYVGNMTLTCHVEGGTR-LAYQWLKNGRPVHTSST 194

Query: 201 ---SNGGSILTVSRTPCDPDLPYICTAQNPVSQRSS---LP-VHVGQFCTDPGASRGGTT 253
              S   + L ++    +    Y C  +NPVS+  S   +P ++ G +     + +G   
Sbjct: 195 YSFSPQNNTLHIAPVTKEDIGNYSCLVRNPVSEMESDIIMPIIYYGPYGLQVNSDKGLKV 254

Query: 254 GETVVGVLGEPV 265
           GE     LGE +
Sbjct: 255 GEVFTVDLGEAI 266



 Score = 40.8 bits (94), Expect = 0.004
 Identities = 46/207 (22%), Positives = 86/207 (41%), Gaps = 18/207 (8%)

Query: 256 TVVGVLGEPVTLPL--ALPACRDTEKVVWLFNTSIISKEREEAATADPLIKSRDPYKNRV 313
           TV GV G+ + LP+           +++WLF       +    +    ++   + Y+++ 
Sbjct: 40  TVHGVRGQALYLPVHYGFHTPASDIQIIWLFERPHTMPKYLLGSVNKSVVPDLE-YQHKF 98

Query: 314 WVSSQDCSLKISQLKIEDAGPYHAYVCSEASSVTSMTH-VTLLIYRRLRKPKITWSLRHS 372
            +   + SL I+ L+  D G Y   V  + +   S +  + + +   + KP +     H 
Sbjct: 99  TMMPPNASLLINPLQFPDEGNYIVKVNIQGNGTLSASQKIQVTVDDPVTKPVVQI---HP 155

Query: 373 EDG----ICRISLTCSVEDGGNTVMYTWT----PLQKEAVVSQGESH--LNVSWRSSENH 422
             G    +  ++LTC VE GG  + Y W     P+   +  S    +  L+++  + E+ 
Sbjct: 156 PSGAVEYVGNMTLTCHVE-GGTRLAYQWLKNGRPVHTSSTYSFSPQNNTLHIAPVTKEDI 214

Query: 423 PNLTCTASNPVSRSSHQFLSENICSGP 449
            N +C   NPVS      +   I  GP
Sbjct: 215 GNYSCLVRNPVSEMESDIIMPIIYYGP 241


>gi|4506969 signaling lymphocytic activation molecule family member
           1 [Homo sapiens]
          Length = 335

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 19/214 (8%)

Query: 34  TSLLFLLMGLRAS----GKDSAPTVVSGILGGSVTLPLNIS-VDTEIENVIWIGPKNALA 88
           T +LFL +   AS    G+      +   LG  V LPL    ++  +   I I    A +
Sbjct: 10  TFVLFLSLAFGASYGTGGRMMNCPKILRQLGSKVLLPLTYERINKSMNKSIHIVVTMAKS 69

Query: 89  FARPKENVTIMVK-SYLGRLDITKWSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFT 147
                EN  + +  S  G        Y   + NLTL    S K   ++  + +T E+  +
Sbjct: 70  LENSVENKIVSLDPSEAGPPRYLGDRYKFYLENLTLGIRESRKE--DEGWYLMTLEKNVS 127

Query: 148 -------LFVYEQLQEPQVTMKSVKVSENFSCNITLMCSVKGAEKSVLYSWTPREPH--A 198
                  L +YEQ+  P++ + + K  EN +C + L C+V+  +  V YSW+ +      
Sbjct: 128 VQRFCLQLRLYEQVSTPEIKVLN-KTQENGTCTLILGCTVEKGDH-VAYSWSEKAGTHPL 185

Query: 199 SESNGGSILTVSRTPCDPDLPYICTAQNPVSQRS 232
           + +N   +L+++  P   D  YICT  NP+S  S
Sbjct: 186 NPANSSHLLSLTLGPQHADNIYICTVSNPISNNS 219



 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 55/227 (24%), Positives = 94/227 (41%), Gaps = 28/227 (12%)

Query: 261 LGEPVTLPLALPACRDTEKVVWLFNTSI---ISKEREEAATADPLIKSRDPYK------- 310
           LG  V LPL        E++    N SI   ++  +    + +  I S DP +       
Sbjct: 39  LGSKVLLPLTY------ERINKSMNKSIHIVVTMAKSLENSVENKIVSLDPSEAGPPRYL 92

Query: 311 -NRVWVSSQDCSLKISQLKIEDAGPYHAYVCSEASSVTSMTHVTLLIYRRLRKPKITWSL 369
            +R     ++ +L I + + ED G Y   +  E +       + L +Y ++  P+I    
Sbjct: 93  GDRYKFYLENLTLGIRESRKEDEGWY--LMTLEKNVSVQRFCLQLRLYEQVSTPEIKVLN 150

Query: 370 RHSEDGICRISLTCSVEDGGNTVMYTWTPLQKEAVVSQGESHLNVSWRSSENHPN--LTC 427
           +  E+G C + L C+VE G + V Y+W+       ++   S   +S      H +    C
Sbjct: 151 KTQENGTCTLILGCTVEKGDH-VAYSWSEKAGTHPLNPANSSHLLSLTLGPQHADNIYIC 209

Query: 428 TASNPVSRSSHQFLSENICSGPERNTKLW------IGLFLMVCLLCV 468
           T SNP+S +S  F     C      TK W      +G  +M+ ++ V
Sbjct: 210 TVSNPISNNSQTFSPWPGCRTDPSETKPWAVYAGLLGGVIMILIMVV 256


>gi|37700249 HEPACAM family member 2 isoform 2 [Homo sapiens]
          Length = 450

 Score = 50.4 bits (119), Expect = 5e-06
 Identities = 57/249 (22%), Positives = 108/249 (43%), Gaps = 18/249 (7%)

Query: 34  TSLLFLLMGLRASGKDSAPT-VVSGILGGSVTLPLNISVDTEIENV--IWI--GPKNALA 88
           T+ L    G  +  K + P+  V G+ G ++ LP++    T   ++  IW+   P     
Sbjct: 7   TTFLSFATGACSGLKVTVPSHTVHGVRGQALYLPVHYGFHTPASDIQIIWLFERPHTMPK 66

Query: 89  FARPKENVTIMVK-SYLGRLDITKWSYSLCISNLTLNDAGSYKAQIN-QRNFEVTTEEEF 146
           +     N +++    Y  +  +   + SL I+ L   D G+Y  ++N Q N  ++  ++ 
Sbjct: 67  YLLGSVNKSVVPDLEYQHKFTMMPPNASLLINPLQFPDEGNYIVKVNIQGNGTLSASQKI 126

Query: 147 TLFVYEQLQEPQVTMKSVKVSENFSCNITLMCSVKGAEKSVLYSW--TPREPHASE---- 200
            + V + + +P V +     +  +  N+TL C V+G  + + Y W    R  H S     
Sbjct: 127 QVTVDDPVTKPVVQIHPPSGAVEYVGNMTLTCHVEGGTR-LAYQWLKNGRPVHTSSTYSF 185

Query: 201 SNGGSILTVSRTPCDPDLPYICTAQNPVSQRSS---LP-VHVGQFCTDPGASRGGTTGET 256
           S   + L ++    +    Y C  +NPVS+  S   +P ++ G +     + +G   GE 
Sbjct: 186 SPQNNTLHIAPVTKEDIGNYSCLVRNPVSEMESDIIMPIIYYGPYGLQVNSDKGLKVGEV 245

Query: 257 VVGVLGEPV 265
               LGE +
Sbjct: 246 FTVDLGEAI 254



 Score = 40.8 bits (94), Expect = 0.004
 Identities = 46/207 (22%), Positives = 86/207 (41%), Gaps = 18/207 (8%)

Query: 256 TVVGVLGEPVTLPL--ALPACRDTEKVVWLFNTSIISKEREEAATADPLIKSRDPYKNRV 313
           TV GV G+ + LP+           +++WLF       +    +    ++   + Y+++ 
Sbjct: 28  TVHGVRGQALYLPVHYGFHTPASDIQIIWLFERPHTMPKYLLGSVNKSVVPDLE-YQHKF 86

Query: 314 WVSSQDCSLKISQLKIEDAGPYHAYVCSEASSVTSMTH-VTLLIYRRLRKPKITWSLRHS 372
            +   + SL I+ L+  D G Y   V  + +   S +  + + +   + KP +     H 
Sbjct: 87  TMMPPNASLLINPLQFPDEGNYIVKVNIQGNGTLSASQKIQVTVDDPVTKPVVQI---HP 143

Query: 373 EDG----ICRISLTCSVEDGGNTVMYTWT----PLQKEAVVSQGESH--LNVSWRSSENH 422
             G    +  ++LTC VE GG  + Y W     P+   +  S    +  L+++  + E+ 
Sbjct: 144 PSGAVEYVGNMTLTCHVE-GGTRLAYQWLKNGRPVHTSSTYSFSPQNNTLHIAPVTKEDI 202

Query: 423 PNLTCTASNPVSRSSHQFLSENICSGP 449
            N +C   NPVS      +   I  GP
Sbjct: 203 GNYSCLVRNPVSEMESDIIMPIIYYGP 229


>gi|98986445 carcinoembryonic antigen-related cell adhesion molecule
           5 preproprotein [Homo sapiens]
          Length = 702

 Score = 49.7 bits (117), Expect = 9e-06
 Identities = 81/366 (22%), Positives = 131/366 (35%), Gaps = 54/366 (14%)

Query: 102 SYLGRLDITKWSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYEQLQEPQVTM 161
           +Y GR +I   + SL I N+  ND G Y   + + +  V  E      VY +L +P ++ 
Sbjct: 94  AYSGR-EIIYPNASLLIQNIIQNDTGFYTLHVIKSDL-VNEEATGQFRVYPELPKPSISS 151

Query: 162 KSVKVSENFSCNITLMCSVKGAEKSVLYSWT-----PREPHASESNGGSILTVSRTPCDP 216
            + K  E+    +   C  +  + + L+ W      P  P    SNG   LT+     + 
Sbjct: 152 NNSKPVEDKDA-VAFTCEPETQDATYLW-WVNNQSLPVSPRLQLSNGNRTLTLFNVTRND 209

Query: 217 DLPYICTAQNPVSQRSSLPVHVGQFCTDPGASRGGTTGETVVGVLGEPVTLPLALPACRD 276
              Y C  QNPVS R S                       ++ VL  P   P   P    
Sbjct: 210 TASYKCETQNPVSARRS--------------------DSVILNVLYGP-DAPTISP---- 244

Query: 277 TEKVVWLFNTSIISKEREEA---ATADPLIKSRDPYKNRVWVSSQDCSLKISQLKIEDAG 333
                   NTS  S E       A ++P  +           S+Q+  L I  + + ++G
Sbjct: 245 -------LNTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQSTQE--LFIPNITVNNSG 295

Query: 334 PYHAYVCSEASSVTSMTHVTLLIYRRLRKPKITWSLRHSEDGICRISLTCSVEDGGNTVM 393
            Y     +  + +   T  T+ +Y    KP IT +  +  +    ++LTC  E    T  
Sbjct: 296 SYTCQAHNSDTGLNRTTVTTITVYAEPPKPFITSNNSNPVEDEDAVALTCEPEIQNTT-- 353

Query: 394 YTW------TPLQKEAVVSQGESHLNVSWRSSENHPNLTCTASNPVSRSSHQFLSENICS 447
           Y W       P+     +S     L +   +  +     C   N +S      +  N+  
Sbjct: 354 YLWWVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDVGPYECGIQNKLSVDHSDPVILNVLY 413

Query: 448 GPERNT 453
           GP+  T
Sbjct: 414 GPDDPT 419



 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 7/134 (5%)

Query: 108 DITKWSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYEQLQEPQVTMKSVKVS 167
           +I + +  L ISN+T  ++G Y  Q N      +     T+ V  +L +P ++  + K  
Sbjct: 454 NIQQHTQELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAELPKPSISSNNSKPV 513

Query: 168 ENFSCNITLMCSVKGAEKSVLYSWT-----PREPHASESNGGSILTVSRTPCDPDLPYIC 222
           E+    +   C  +    + L+ W      P  P    SNG   LT+     +    Y+C
Sbjct: 514 EDKDA-VAFTCEPEAQNTTYLW-WVNGQSLPVSPRLQLSNGNRTLTLFNVTRNDARAYVC 571

Query: 223 TAQNPVSQRSSLPV 236
             QN VS   S PV
Sbjct: 572 GIQNSVSANRSDPV 585



 Score = 36.6 bits (83), Expect = 0.075
 Identities = 42/160 (26%), Positives = 67/160 (41%), Gaps = 13/160 (8%)

Query: 106 RLDITKWSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYEQLQEPQVTMKSVK 165
           RL ++  + +L + N+T NDA +Y   I Q +      +  TL V   L  P   + S  
Sbjct: 546 RLQLSNGNRTLTLFNVTRNDARAYVCGI-QNSVSANRSDPVTLDV---LYGPDTPIISPP 601

Query: 166 VSENFS-CNITLMCSVKGAEKSVLYSWTPREPHASESNGGSILTVSRTPCDPDLPYICTA 224
            S   S  N+ L C    +  S  YSW     +        +L +++   + +  Y C  
Sbjct: 602 DSSYLSGANLNLSCH-SASNPSPQYSW---RINGIPQQHTQVLFIAKITPNNNGTYACFV 657

Query: 225 QNPVSQRSS---LPVHVGQFCTDPGASRGGTTGETVVGVL 261
            N  + R++     + V    T PG S G T G  ++GVL
Sbjct: 658 SNLATGRNNSIVKSITVSASGTSPGLSAGATVG-IMIGVL 696


>gi|5031561 transmembrane glycoprotein A33 precursor [Homo sapiens]
          Length = 319

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 18/179 (10%)

Query: 309 YKNRVWVSSQ----DCSLKISQLKIEDAGPYHAYVCSEAS-SVTSMTHVTLLIYRRLRKP 363
           YKNRV +S+     D S+ I QL + D G Y   V   +     + + V LL+     KP
Sbjct: 85  YKNRVSISNNAEQSDASITIDQLTMADNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKP 144

Query: 364 KITWSLRHSEDGICRISLTCSVEDGGNTVMYTW---TPLQKEAVVSQGESHLNVSWR--S 418
           +    +         I LTC  ++G  T  Y+W     L +E  ++Q  S   VS +  S
Sbjct: 145 EC--GIEGETIIGNNIQLTCQSKEGSPTPQYSWKRYNILNQEQPLAQPASGQPVSLKNIS 202

Query: 419 SENHPNLTCTASNPVSRSSHQFLSENIC-SGPERNTKLWIGLF--LMVCLLCVGIFSWC 474
           ++      CT+SN       QF +  +    P  N  L++G+   ++  L+ +GI  +C
Sbjct: 203 TDTSGYYICTSSN---EEGTQFCNITVAVRSPSMNVALYVGIAVGVVAALIIIGIIIYC 258


>gi|118572606 hemicentin 1 [Homo sapiens]
          Length = 5635

 Score = 47.4 bits (111), Expect = 4e-05
 Identities = 100/431 (23%), Positives = 168/431 (38%), Gaps = 77/431 (17%)

Query: 21   QRSQLQIFSSVLQTSLLFLLMGLRASGKDSAPTVVSGILGGSVTLPLNISVDTEIENVIW 80
            Q  ++Q  ++V  T L+  L+G+       +P+V + I G  +TLP  +     I    W
Sbjct: 872  QFGKIQSETTVTVTGLVAPLIGI-------SPSVANVIEGQQLTLPCTLLAGNPIPERRW 924

Query: 81   IGPKNALAFARPKENVTIMVKSYLGRLDITKWSYSLCISNLTLNDAGSYKAQINQRNFEV 140
            I  KN+   A   +N  I V+S            SL I  + L D G Y    +      
Sbjct: 925  I--KNS---AMLLQNPYITVRS----------DGSLHIERVQLQDGGEYTCVASNVAGTN 969

Query: 141  TTEEEFTLFVYEQLQEPQVTMKSVKVSENFSCNITLMCSVKGAEK-SVLYSWTPREPHAS 199
                   + V   +Q  Q  + +++        +TL C   G  K SV+  W+ +    S
Sbjct: 970  NKTTSVVVHVLPTIQHGQQILSTIE-----GIPVTLPCKASGNPKPSVI--WSKKGELIS 1022

Query: 200  ESNG-------GSILTVSRTPCDPDLPYICTAQNP---VSQRSSLPVHVGQFCTDPGASR 249
             S+        GS+  VS    +    Y+CTA N      ++  L V+V       G  R
Sbjct: 1023 TSSAKFSAGADGSLYVVS-PGGEESGEYVCTATNTAGYAKRKVQLTVYVRPRVF--GDQR 1079

Query: 250  GGTTGETV-VGVL-GEPVTLPLALPACRDTEKVVWLFNTSIISKEREEAATADPLIKSRD 307
            G +  + V + VL GE VTLP  + +      + W   T +IS                 
Sbjct: 1080 GLSQDKPVEISVLAGEEVTLPCEVKSL-PPPIITWAKETQLIS----------------- 1121

Query: 308  PYKNRVWVSSQDCSLKISQLKIEDAGPYHAYVCSEASSVTSMTHVTLLIYRRLRKPKITW 367
            P+  R        S+KI++ +  D+G Y     + A +VT    + + +      PKI  
Sbjct: 1122 PFSPR-HTFLPSGSMKITETRTSDSGMYLCVATNIAGNVTQAVKLNVHV-----PPKIQR 1175

Query: 368  SLRHSEDGI-CRISLTCSVEDGGNTVMYTWTP------LQKEAVVSQGESHLNVSWRSSE 420
              +H +  +  R+ + C+ + G    + TW+       +  E  VS  +  L++   +  
Sbjct: 1176 GPKHLKVQVGQRVDIPCNAQ-GTPLPVITWSKGGSTMLVDGEHHVSNPDGTLSIDQATPS 1234

Query: 421  NHPNLTCTASN 431
            +    TC A+N
Sbjct: 1235 DAGIYTCVATN 1245



 Score = 39.3 bits (90), Expect = 0.012
 Identities = 39/140 (27%), Positives = 55/140 (39%), Gaps = 13/140 (9%)

Query: 93   KENVTIMVKSYLGRLDITKWSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYE 152
            K+NV  ++ + LG+     +   L + N+ L D+G Y    N    E T     T+ V  
Sbjct: 4204 KDNV--LLANLLGKYTAEPYG-ELILENVVLEDSGFYTCVANNAAGEDTHTVSLTVHVL- 4259

Query: 153  QLQEPQVTMKSVKVSENFSCNITLMCSVKGAEKSVLYSWTPRE----PHASESNGGSILT 208
                P  T     VS N    + L C   G     L +WT        H    NG S L 
Sbjct: 4260 ----PTFTELPGDVSLNKGEQLRLSCKATGIPLPKL-TWTFNNNIIPAHFDSVNGHSELV 4314

Query: 209  VSRTPCDPDLPYICTAQNPV 228
            + R   +    Y+CTA+N V
Sbjct: 4315 IERVSKEDSGTYVCTAENSV 4334



 Score = 38.9 bits (89), Expect = 0.015
 Identities = 45/140 (32%), Positives = 57/140 (40%), Gaps = 23/140 (16%)

Query: 115  SLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYE-----QLQEPQVTMKSVKVSEN 169
            +L I   T +DAG Y       N   T E E TL V E      L+ P  T    +V+  
Sbjct: 1225 TLSIDQATPSDAGIYTCVAT--NIAGTDETEITLHVQEPPTVEDLEPPYNTTFQERVANQ 1282

Query: 170  FSCNITLMCSVKGAEKSVLYSW-------TPREPHASESNGGSILTV-SRTPCDPDLPYI 221
                I   C  KG  K  +  W       T REP  S    G++L + S TP D    YI
Sbjct: 1283 ---RIEFPCPAKGTPKPTI-KWLHNGRELTGREPGISILEDGTLLVIASVTPYDNG-EYI 1337

Query: 222  CTAQN---PVSQRSSLPVHV 238
            C A N      ++ +L VHV
Sbjct: 1338 CVAVNEAGTTERKYNLKVHV 1357



 Score = 34.3 bits (77), Expect = 0.37
 Identities = 75/361 (20%), Positives = 125/361 (34%), Gaps = 46/361 (12%)

Query: 104  LGRLDITKWSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYEQLQEPQVTMKS 163
            +GR+ I      L IS    +DA  Y    +  N   T ++E+ L VY +          
Sbjct: 2242 MGRVRILSGGRQLQISIAEKSDAALYSCVAS--NVAGTAKKEYNLQVYIRPTITNSGSHP 2299

Query: 164  VKVSENFSCNITLMCSVKGAEKSVLYSWTPREPHASESNG------GSILTVSRTPCDPD 217
             ++      +I+L C V+G     + +W        ++ G      G IL +        
Sbjct: 2300 TEIIVTRGKSISLECEVQGIPPPTV-TWMKDGHPLIKAKGVEILDEGHILQLKNIHVSDT 2358

Query: 218  LPYICTAQNPVS---QRSSLPVHVGQFCTDPGASRGGTTGETVVGVLGEPVTLPLALPAC 274
              Y+C A N      ++  L VH       P       + E +  V    V+L       
Sbjct: 2359 GRYVCVAVNVAGMTDKKYDLSVHA-----PPSIIGNHRSPENISVVEKNSVSLTCEASGI 2413

Query: 275  RDTEKVVWLFNTSIISKEREEAATADPLIKSRDPYKNRVWVSSQDCSLKISQLKIEDAGP 334
                 + W  +   +S                    N V + S    L++ Q  +EDAG 
Sbjct: 2414 -PLPSITWFKDGWPVS------------------LSNSVRILSGGRMLRLMQTTMEDAGQ 2454

Query: 335  YHAYVCSEASSVTSMTHVTLLIYRRLRKPKITWSLRHSEDGICRISLTCSVEDGGNTVMY 394
            Y   V + A     +  +++L+   +        ++  E     ++LTC V  G      
Sbjct: 2455 YTCVVRNAAGEERKIFGLSVLVPPHIVGENTLEDVKVKEKQ--SVTLTCEV-TGNPVPEI 2511

Query: 395  TW----TPLQKEAV--VSQGESHLNVSWRSSENHPNLTCTASNPVSRSSHQFLSENICSG 448
            TW     PLQ++    +  G   L ++     +    TC AS+P    S  F S N+   
Sbjct: 2512 TWHKDGQPLQEDEAHHIISGGRFLQITNVQVPHTGRYTCLASSPAGHKSRSF-SLNVFVS 2570

Query: 449  P 449
            P
Sbjct: 2571 P 2571



 Score = 32.7 bits (73), Expect = 1.1
 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 6/65 (9%)

Query: 321 SLKISQLKIEDAGPYHAYVCSEASSVTSMTHVTLLIYRRLRKPKIT-WSLRHSEDGICRI 379
           SL++  +K  DAG YH  V SE  S  +   +T+        PK+T      S  G   +
Sbjct: 575 SLELKSVKFNDAGEYHCMVSSEGGSSAASVFLTV-----QEPPKVTVMPKNQSFTGGSEV 629

Query: 380 SLTCS 384
           S+ CS
Sbjct: 630 SIMCS 634



 Score = 30.8 bits (68), Expect = 4.1
 Identities = 56/276 (20%), Positives = 99/276 (35%), Gaps = 54/276 (19%)

Query: 195  EPHASESNGGSILTVSRTPCDPDLPYICTAQNPVSQRSSLPVHVGQFCTDPGASRGGTTG 254
            + H + S  G +L + +   +    Y C A N   + S    H      +P    G    
Sbjct: 3479 DAHLTVSTHGMVLQLLKAETEDSGKYTCIASNEAGEVSK---HFILKVLEPPHINGSEEH 3535

Query: 255  ETVVGVLGEPVTLPL---ALPACRDTEKVVWLFNTSIISKEREEAATADPLIKSRDPYKN 311
            E +  ++  P+ L      +PA     K+ W+ +               PL     P  +
Sbjct: 3536 EEISVIVNNPLELTCIASGIPA----PKMTWMKD-------------GRPL-----PQTD 3573

Query: 312  RVWVSSQDCSLKISQLKIEDAGPYHAYVCSEASSVTSMTHVTLLIYRRLR---KPKITWS 368
            +V        L+IS  ++ED G Y     S A        V + +   +    +P+    
Sbjct: 3574 QVQTLGGGEVLRISTAQVEDTGRYTCLASSPAGDDDKEYLVRVHVPPNIAGTDEPRDITV 3633

Query: 369  LRHSEDGICRISLTCSVEDGGNTVMYTW---------TPLQKEAVVSQGESHLNVSWRSS 419
            LR+ +     ++L C   D     + TW         TP  +   +  G  +L ++    
Sbjct: 3634 LRNRQ-----VTLECK-SDAVPPPVITWLRNGERLQATPRVR---ILSGGRYLQINNADL 3684

Query: 420  ENHPNLTCTASNPVSRSSHQFL-----SENICSGPE 450
             +  N TC ASN   +++ +F+       NI  GP+
Sbjct: 3685 GDTANYTCVASNIAGKTTREFILTVNVPPNIKGGPQ 3720



 Score = 29.6 bits (65), Expect = 9.2
 Identities = 65/343 (18%), Positives = 117/343 (34%), Gaps = 46/343 (13%)

Query: 115  SLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYEQLQEPQVTMKSVKVSENFSCNI 174
            +L I    ++D G Y      +  E   +   T++V   +++      SV V+     ++
Sbjct: 3019 TLQIIRAKVSDGGEYTCIAINQAGESKKKFSLTVYVPPSIKDHDSESLSV-VNVREGTSV 3077

Query: 175  TLMCSVKGAEKSVLYSWTPREPHASESN------GGSILTVSRTPCDPDLPYICTAQNPV 228
            +L C        V+ +W       +ES        G +L + +        Y+C A N V
Sbjct: 3078 SLECESNAVPPPVI-TWYKNGRMITESTHVEILADGQMLHIKKAEVSDTGQYVCRAIN-V 3135

Query: 229  SQRSSLPVHVGQFCTDPGASRGGTTGETVVGVLGEPVTLPLALPACRDTEKVVWLFNTSI 288
            + R     H+  +      S  G   E +V  +  PVTL            + WL     
Sbjct: 3136 AGRDDKNFHLNVYVPP---SIEGPEREVIVETISNPVTLTCDATGI-PPPTIAWL----- 3186

Query: 289  ISKEREEAATADPLIKSRDPYKNRVWVSSQDCSLKISQLKIEDAGPYHAYVCSEASSVTS 348
              K  +    +D L          V + S    L+I++ +  D+G Y     +       
Sbjct: 3187 --KNHKRIENSDSL---------EVRILSGGSKLQIARSQHSDSGNYTCIASNMEGKAQK 3235

Query: 349  MTHVTLLIYRRLRKPKITWSLRHSEDGIC---RISLTCSVEDGGNTVMYTWTPLQKEAV- 404
               +++ +      P +  +   S+  +     + L C+  +G  T +  W    K    
Sbjct: 3236 YYFLSIQV-----PPSVAGAEIPSDVSVLLGENVELVCNA-NGIPTPLIQWLKDGKPIAS 3289

Query: 405  -------VSQGESHLNVSWRSSENHPNLTCTASNPVSRSSHQF 440
                   VS   S LN+    + +    TC A+NP       F
Sbjct: 3290 GETERIRVSANGSTLNIYGALTSDTGKYTCVATNPAGEEDRIF 3332


>gi|52317156 carcinoembryonic antigen-related cell adhesion molecule
           isoform 2 [Homo sapiens]
          Length = 292

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 38/139 (27%), Positives = 59/139 (42%), Gaps = 8/139 (5%)

Query: 102 SYLGRLDITKWSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYEQLQEPQVTM 161
           +Y GR  I+  S  L   N+TL D G Y  Q+  RN ++  +    L VYE + +P +  
Sbjct: 94  AYSGRETISP-SGDLHFQNVTLEDTGYYNLQVTYRNSQI-EQASHHLRVYESVAQPSIQA 151

Query: 162 KSVKVSENFSCNITLMCSVKGAEKSVLYSWTPREPHASE----SNGGSILTVSRTPCDPD 217
            S  V+E  S  + L C       S  + +  +    ++    S    +LT+     +  
Sbjct: 152 SSTTVTEKGS--VVLTCHTNNTGTSFQWIFNNQRLQVTKRMKLSWFNHVLTIDPIRQEDA 209

Query: 218 LPYICTAQNPVSQRSSLPV 236
             Y C   NPVS   S P+
Sbjct: 210 GEYQCEVSNPVSSNRSDPL 228


>gi|148612793 carcinoembryonic antigen-related cell adhesion
           molecule isoform 1 [Homo sapiens]
          Length = 293

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 38/139 (27%), Positives = 59/139 (42%), Gaps = 8/139 (5%)

Query: 102 SYLGRLDITKWSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYEQLQEPQVTM 161
           +Y GR  I+  S  L   N+TL D G Y  Q+  RN ++  +    L VYE + +P +  
Sbjct: 94  AYSGRETISP-SGDLHFQNVTLEDTGYYNLQVTYRNSQI-EQASHHLRVYESVAQPSIQA 151

Query: 162 KSVKVSENFSCNITLMCSVKGAEKSVLYSWTPREPHASE----SNGGSILTVSRTPCDPD 217
            S  V+E  S  + L C       S  + +  +    ++    S    +LT+     +  
Sbjct: 152 SSTTVTEKGS--VVLTCHTNNTGTSFQWIFNNQRLQVTKRMKLSWFNHVLTIDPIRQEDA 209

Query: 218 LPYICTAQNPVSQRSSLPV 236
             Y C   NPVS   S P+
Sbjct: 210 GEYQCEVSNPVSSNRSDPL 228


>gi|40255013 carcinoembryonic antigen-related cell adhesion molecule
           6 (non-specific cross reacting antigen) [Homo sapiens]
          Length = 344

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 43/145 (29%), Positives = 59/145 (40%), Gaps = 19/145 (13%)

Query: 102 SYLGRLDITKWSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYEQLQEPQVTM 161
           +Y GR  I   + SL I N+T ND G Y  Q+ + +  V  E      VY +L +P ++ 
Sbjct: 94  AYSGRETIYP-NASLLIQNVTQNDTGFYTLQVIKSDL-VNEEATGQFHVYPELPKPSISS 151

Query: 162 KSVKVSEN-----FSC-----NITLMCSVKGAEKSVLYSWTPREPHASESNGGSILTVSR 211
            +    E+     F+C     N T +  V G          P  P    SNG   LT+  
Sbjct: 152 NNSNPVEDKDAVAFTCEPEVQNTTYLWWVNGQS-------LPVSPRLQLSNGNMTLTLLS 204

Query: 212 TPCDPDLPYICTAQNPVSQRSSLPV 236
              +    Y C  QNP S   S PV
Sbjct: 205 VKRNDAGSYECEIQNPASANRSDPV 229



 Score = 30.0 bits (66), Expect = 7.0
 Identities = 32/143 (22%), Positives = 52/143 (36%), Gaps = 13/143 (9%)

Query: 319 DCSLKISQLKIEDAGPYHAYVCSEA---SSVTSMTHVTLLIYRRLRKPKITWSLRHSEDG 375
           + SL I  +   D G Y   V          T   HV    Y  L KP I+ +  +  + 
Sbjct: 104 NASLLIQNVTQNDTGFYTLQVIKSDLVNEEATGQFHV----YPELPKPSISSNNSNPVED 159

Query: 376 ICRISLTCSVEDGGNTVMYTWT-----PLQKEAVVSQGESHLNVSWRSSENHPNLTCTAS 430
              ++ TC  E    T ++ W      P+     +S G   L +      +  +  C   
Sbjct: 160 KDAVAFTCEPEVQNTTYLW-WVNGQSLPVSPRLQLSNGNMTLTLLSVKRNDAGSYECEIQ 218

Query: 431 NPVSRSSHQFLSENICSGPERNT 453
           NP S +    ++ N+  GP+  T
Sbjct: 219 NPASANRSDPVTLNVLYGPDGPT 241


>gi|66346706 neuronal growth regulator 1 [Homo sapiens]
          Length = 354

 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 6/121 (4%)

Query: 109 ITKWSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYEQLQEPQVTMKSVKVSE 168
           + K  YSL I N+ + D G Y   +  ++   T +   T+ V      P++   S  ++ 
Sbjct: 96  LNKRDYSLQIQNVDVTDDGPYTCSVQTQHTPRTMQVHLTVQV-----PPKIYDISNDMTV 150

Query: 169 NFSCNITLMCSVKGAEKSVLYSWTPREPHASESNGGSILTVSRTPCDPDLPYICTAQNPV 228
           N   N+TL C   G  +  + SW    P A     G  L +     D    Y C+A+N V
Sbjct: 151 NEGTNVTLTCLATGKPEPSI-SWRHISPSAKPFENGQYLDIYGITRDQAGEYECSAENDV 209

Query: 229 S 229
           S
Sbjct: 210 S 210



 Score = 35.8 bits (81), Expect = 0.13
 Identities = 32/156 (20%), Positives = 66/156 (42%), Gaps = 13/156 (8%)

Query: 279 KVVWLFNTSIISKEREEAATADPLIKSRDPYKNRVWVSSQDCSLKISQLKIEDAGPYHAY 338
           K  WL  +SII    ++ +         DP  +   ++ +D SL+I  + + D GPY   
Sbjct: 68  KGAWLNRSSIIFAGGDKWSV--------DPRVSISTLNKRDYSLQIQNVDVTDDGPYTCS 119

Query: 339 VCSEASSVTSMTHVTLLIYRRLRKPKITWSLRHSEDGICRISLTCSVEDGGNTVMYTWTP 398
           V ++ +  T   H+T+ +  ++       ++    +    ++LTC +  G      +W  
Sbjct: 120 VQTQHTPRTMQVHLTVQVPPKIYDISNDMTVNEGTN----VTLTC-LATGKPEPSISWRH 174

Query: 399 LQKEAVVSQGESHLNVSWRSSENHPNLTCTASNPVS 434
           +   A   +   +L++   + +      C+A N VS
Sbjct: 175 ISPSAKPFENGQYLDIYGITRDQAGEYECSAENDVS 210


>gi|156071472 CD2 molecule [Homo sapiens]
          Length = 351

 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 58/236 (24%), Positives = 95/236 (40%), Gaps = 47/236 (19%)

Query: 259 GVLGEPVTLPL-ALPACRDTEKVVW--LFNTSIISKEREEAATADPLIKSRDPYKNRVWV 315
           G LG+ + L + +     D + + W    +   I++ R+E  T     K +D YK     
Sbjct: 35  GALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKET----FKEKDTYK----- 85

Query: 316 SSQDCSLKISQLKIEDAGPYHAYVCSEASSVTSMTHVTLLIYRRLRKPKITWSLRHSEDG 375
             ++ +LKI  LK +D   Y   +              L I  R+ KPKI+W+  ++   
Sbjct: 86  LFKNGTLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQERVSKPKISWTCINT--- 142

Query: 376 ICRISLTCSVEDGGNTVMYTWTPLQKEAVVSQGESHLNVSWR------SSENHPNLTCTA 429
               +LTC V +G             E  + Q   HL +S R      ++       CTA
Sbjct: 143 ----TLTCEVMNG----------TDPELNLYQDGKHLKLSQRVITHKWTTSLSAKFKCTA 188

Query: 430 SNPVSRSSHQFLSENICSGPERNTKLWIGLFLMVC------LLCVGIFSWCIWKRK 479
            N VS+ S    S    S PE+   ++  L + +C      ++ V +  + I KRK
Sbjct: 189 GNKVSKES----SVEPVSCPEKGLDIY--LIIGICGGGSLLMVFVALLVFYITKRK 238



 Score = 30.0 bits (66), Expect = 7.0
 Identities = 42/187 (22%), Positives = 72/187 (38%), Gaps = 32/187 (17%)

Query: 57  GILGGSVTLPL-NISVDTEIENVIW--IGPKNALAFARPKENVTIMVKSYLGRLDITKWS 113
           G LG  + L + +  +  +I+++ W     K  +A  R KE  T   K           +
Sbjct: 35  GALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFR-KEKETFKEKDTYKLFK----N 89

Query: 114 YSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYEQLQEPQVTMKSVKVSENFSCN 173
            +L I +L  +D   YK  I     +   E+ F L + E++ +P+++   +        N
Sbjct: 90  GTLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQERVSKPKISWTCI--------N 141

Query: 174 ITLMCSVKGAEKSVLYSWTPREPHASESNGGSILTVS------RTPCDPDLPYICTAQNP 227
            TL C V              +P  +    G  L +S      +        + CTA N 
Sbjct: 142 TTLTCEVMNG----------TDPELNLYQDGKHLKLSQRVITHKWTTSLSAKFKCTAGNK 191

Query: 228 VSQRSSL 234
           VS+ SS+
Sbjct: 192 VSKESSV 198


>gi|21314600 carcinoembryonic antigen-related cell adhesion molecule
           8 [Homo sapiens]
          Length = 349

 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 8/127 (6%)

Query: 115 SLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYEQLQEPQVTMKSVKVSENFSCNI 174
           SL + N+T ND GSY  Q+ + N  ++ E      V+ +  +P ++  +    E+    +
Sbjct: 106 SLLMRNVTRNDTGSYTLQVIKLNL-MSEEVTGQFSVHPETPKPSISSNNSNPVEDKDA-V 163

Query: 175 TLMCSVKGAEKSVLYSWT-----PREPHASESNGGSILTVSRTPCDPDLPYICTAQNPVS 229
              C  +    + L+ W      P  P    SNG   LT+     +   PY C  QNP S
Sbjct: 164 AFTCEPETQNTTYLW-WVNGQSLPVSPRLQLSNGNRTLTLLSVTRNDVGPYECEIQNPAS 222

Query: 230 QRSSLPV 236
              S PV
Sbjct: 223 ANFSDPV 229


>gi|9910342 SLAM family member 8 [Homo sapiens]
          Length = 285

 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 19/185 (10%)

Query: 59  LGGSVTL----PLNISVDTEIENVIWIGPKNALAFARPKENVTIMVKSYLGRLDITKWSY 114
           +GGSV L    P    V   I   +W   +    F R     T+    +LGR  +   + 
Sbjct: 29  VGGSVLLVAARPPGFQVREAIWRSLWPSEELLATFFRGSLE-TLYHSRFLGRAQLHS-NL 86

Query: 115 SLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYEQLQEPQVTMKSV---KVSENFS 171
           SL +  L   D+G++   +     +  T+    L VY+ +  P V +          + +
Sbjct: 87  SLELGPLESGDSGNFSVLMVDTRGQPWTQT-LQLKVYDAVPRPVVQVFIAVERDAQPSKT 145

Query: 172 CNITLMCSVKGAEKSVLYSWTPR-------EPHASESNGGSILTVSRTPCDPDLPYICTA 224
           C + L C      + + YSW          EPH+  ++G  +L++S  P D D+ Y C  
Sbjct: 146 CQVFLSCWAPNISE-ITYSWRRETTMDFGMEPHSLFTDG-QVLSISLGPGDRDVAYSCIV 203

Query: 225 QNPVS 229
            NPVS
Sbjct: 204 SNPVS 208


>gi|115529482 neural cell adhesion molecule 1 isoform 2 [Homo
           sapiens]
          Length = 858

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 68/354 (19%), Positives = 133/354 (37%), Gaps = 52/354 (14%)

Query: 116 LCISNLTLNDAGSYKAQ--------INQRNFEVTTEEEFTLFVYEQLQEPQVTMKSVKVS 167
           L I  +   D G+Y+ +        IN ++ +V      T+         Q     V  +
Sbjct: 174 LQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTI---------QARQNIVNAT 224

Query: 168 ENFSCNITLMCSVKGAEKSVLYSWTPREPHASE---------SNGGSILTVSRTPCDPDL 218
            N   ++TL+C  +G  +  + SWT       +         S+  S LT+ +   + + 
Sbjct: 225 ANLGQSVTLVCDAEGFPEPTM-SWTKDGEQIEQEEDDEKYIFSDDSSQLTIKKVDKNDEA 283

Query: 219 PYICTAQNPVSQRSSLPVHVGQFCTDPGASRGGTTGETVVGVLGEPVTLPLALPACRDTE 278
            YIC A+N   ++ +  +H+  F           T       L E VTL           
Sbjct: 284 EYICIAENKAGEQDA-TIHLKVFAKPKITYVENQTAME----LEEQVTLTCEASG-DPIP 337

Query: 279 KVVWLFNTSIISKEREEAATADPLIKSRDPYKNRVWVSSQDCSLKISQLKIEDAGPYHAY 338
            + W  +T  IS E + + T     ++ D +   V   ++  SL +  ++  DAG Y   
Sbjct: 338 SITWRTSTRNISSEEKASWTRPEKQETLDGHM-VVRSHARVSSLTLKSIQYTDAGEYICT 396

Query: 339 VCSEASSVTSMTHVTLLIYRRLRKPKITWSLRHSEDGICRISLTCSV-----------ED 387
             +     +   ++ +    +L+ P   ++   ++     +++TC V            D
Sbjct: 397 ASNTIGQDSQSMYLEVQYAPKLQGPVAVYTWEGNQ-----VNITCEVFAYPSATISWFRD 451

Query: 388 GGNTVMYTWTPLQKEAVVSQGESHLNVSWRSSENHPNLTCTASNPVSRSSHQFL 441
           G       ++ +  +   +   S+L V+  S  +  N  CTA N + + S +F+
Sbjct: 452 GQLLPSSNYSNI--KIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFI 503


>gi|59939900 opioid binding protein/cell adhesion molecule-like
           isoform b preproprotein [Homo sapiens]
          Length = 338

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 61/254 (24%), Positives = 98/254 (38%), Gaps = 27/254 (10%)

Query: 27  IFSSVLQTSLLFLLMGLRASGKDSAPTVVSGIL---GGSVTLPLNISVDTEIENVIWIGP 83
           +FS+   T+LLF+      SG  + P  +  +    G S TL    ++D  +  V W+  
Sbjct: 9   VFSAT--TALLFIPGVPVRSGDATFPKAMDNVTVRQGESATL--RCTIDDRVTRVAWLNR 64

Query: 84  KNALAFARPKENVTIMVKSYLGRLDITKWSYSLCISNLTLNDAGSYKAQINQRNFEVTTE 143
              L     K ++   V   +     T   YS+ I N+ + D G Y   +   N   T+ 
Sbjct: 65  STILYAGNDKWSIDPRVIILVN----TPTQYSIMIQNVDVYDEGPYTCSVQTDNHPKTSR 120

Query: 144 EEFTLFVYEQLQEPQVTMKSVKVSENFSCNITLMCSVKGAEKSVLYSWTPREPHASESNG 203
               + V      PQ+   S  ++ N   ++TL+C   G  +  +   T R     E  G
Sbjct: 121 VHLIVQV-----PPQIMNISSDITVNEGSSVTLLCLAIGRPEPTV---TWRHLSVKEGQG 172

Query: 204 ----GSILTVSRTPCDPDLPYICTAQNPVSQRSSLPVHVGQFCTDPGASRGGTTGETV-- 257
                  L +S    D    Y C+A N V+      V +      P  S+   TG +V  
Sbjct: 173 FVSEDEYLEISDIKRDQSGEYECSALNDVAAPDVRKVKI-TVNYPPYISKAKNTGVSVGQ 231

Query: 258 VGVLG-EPVTLPLA 270
            G+L  E   +P+A
Sbjct: 232 KGILSCEASAVPMA 245


>gi|5901930 carcinoembryonic antigen-related cell adhesion molecule
           7 [Homo sapiens]
          Length = 265

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 41/156 (26%), Positives = 61/156 (39%), Gaps = 12/156 (7%)

Query: 115 SLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYEQLQEPQVTMKSVKVSENFSCNI 174
           +L I N+T NDAG Y   + + N  V  E     +V+ +  +P +T  +    EN    +
Sbjct: 107 TLLIQNVTHNDAGFYTLHVIKENL-VNEEVTRQFYVFSEPPKPSITSNNFNPVENKDI-V 164

Query: 175 TLMCSVKGAEKSVLYSWTPRE-----PHASESNGGSILTVSRTPCDPDLPYICTAQNPVS 229
            L C  +    + L+ W   +     P    S     L +     +   PY C  QNPV 
Sbjct: 165 VLTCQPETQNTTYLW-WVNNQSLLVSPRLLLSTDNRTLVLLSATKNDIGPYECEIQNPVG 223

Query: 230 QRSSLPVHVGQFCTDPGAS----RGGTTGETVVGVL 261
              S PV +        AS      GT    ++GVL
Sbjct: 224 ASRSDPVTLNVRYESVQASSPDLSAGTAVSIMIGVL 259


>gi|109240546 pregnancy specific beta-1-glycoprotein 3 [Homo
           sapiens]
          Length = 428

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 84/395 (21%), Positives = 143/395 (36%), Gaps = 40/395 (10%)

Query: 14  GPFSSKPQRSQLQIFSSVLQTSLLFLLMGLRASGKDSAPTVVSGILGGSVTLPLNISVDT 73
           GP S+ P   ++  +  +L T+LL     L  + + +     + +  G   L L  ++  
Sbjct: 2   GPLSAPPCTQRIT-WKGLLLTALLLNFWNLPTTAQVTIEAEPTKVSKGKDVLLLVHNLPQ 60

Query: 74  EIENVIWIGPK-----NALAFARPKENVTIMVKSYLGRLDITKWSYSLCISNLTLNDAGS 128
            +   IW   +     + +        + I   +Y GR  +   + SL I N+T  DAGS
Sbjct: 61  NLAGYIWYKGQMKDLYHYITSYVVDGQIIIYGPAYSGRETVYS-NASLLIQNVTREDAGS 119

Query: 129 YKAQINQRNFEVTTEE-EFTLFVYEQLQEPQVTMKSVKVSENFSCNITLMCSVKGAEKSV 187
           Y   I +R      E   FT  +Y +  +P ++  ++   E+    ++L C  +  + S 
Sbjct: 120 YTLHIVKRGDGTRGETGHFTFTLYLETPKPSISSSNLYPREDMEA-VSLTCDPETPDASY 178

Query: 188 LYSW-----TPREPHASESNGGSILTVSRTPCDPDLPYICTAQNPVSQRSSLPVHVGQFC 242
           L+ W      P       S     L +         PY C  +NPVS   S PV +    
Sbjct: 179 LW-WMNGQSLPMTHSLQLSKNKRTLFLFGVTKYTAGPYECEIRNPVSASRSDPVTLNLL- 236

Query: 243 TDPGASRGGTTGETVVGVLGEPVTLPLALPACRDTEKVVWLFNTSIISKEREEAATADPL 302
             P   +   T   +     + V      P   +   + WL   S+            P 
Sbjct: 237 --PKLPKPYITINNLNPRENKDVLAFTCEPKSENYTYIWWLNGQSL---------PVSPR 285

Query: 303 IKSRDPYKNRVWVSSQDCSLKISQLKIEDAGPYHAYVCSEASSVTSMTHVTLLIYRRLRK 362
           +K   P +NR+        L +  +   + GPY   +      + S   VTL +      
Sbjct: 286 VKR--PIENRI--------LILPSVTRNETGPYQCEIQDRYGGIRSYP-VTLNVLYGPDL 334

Query: 363 PKITWSLRHSEDGICRISLTCSVEDGGNTVMYTWT 397
           P+I  S  +   G   + L+C   D      Y+WT
Sbjct: 335 PRIYPSFTYYHSGE-NLYLSC-FADSNPPAEYSWT 367



 Score = 38.5 bits (88), Expect = 0.020
 Identities = 37/144 (25%), Positives = 56/144 (38%), Gaps = 10/144 (6%)

Query: 309 YKNRVWVSSQDCSLKISQLKIEDAGPYHAYVCSEASSVTSMT-HVTLLIYRRLRKPKITW 367
           Y  R  V S + SL I  +  EDAG Y  ++          T H T  +Y    KP I+ 
Sbjct: 95  YSGRETVYS-NASLLIQNVTREDAGSYTLHIVKRGDGTRGETGHFTFTLYLETPKPSISS 153

Query: 368 SLRHSEDGICRISLTCSVEDGGNTVMYTW------TPLQKEAVVSQGESHLNVSWRSSEN 421
           S  +  + +  +SLTC  E       Y W       P+     +S+ +  L +   +   
Sbjct: 154 SNLYPREDMEAVSLTCDPET--PDASYLWWMNGQSLPMTHSLQLSKNKRTLFLFGVTKYT 211

Query: 422 HPNLTCTASNPVSRSSHQFLSENI 445
                C   NPVS S    ++ N+
Sbjct: 212 AGPYECEIRNPVSASRSDPVTLNL 235


>gi|94420689 neural cell adhesion molecule 1 isoform 1 [Homo
           sapiens]
          Length = 848

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 67/354 (18%), Positives = 131/354 (37%), Gaps = 62/354 (17%)

Query: 116 LCISNLTLNDAGSYKAQ--------INQRNFEVTTEEEFTLFVYEQLQEPQVTMKSVKVS 167
           L I  +   D G+Y+ +        IN ++ +V      T+         Q     V  +
Sbjct: 174 LQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTI---------QARQNIVNAT 224

Query: 168 ENFSCNITLMCSVKGAEKSVLYSWTPREPHASE---------SNGGSILTVSRTPCDPDL 218
            N   ++TL+C  +G  +  + SWT       +         S+  S LT+ +   + + 
Sbjct: 225 ANLGQSVTLVCDAEGFPEPTM-SWTKDGEQIEQEEDDEKYIFSDDSSQLTIKKVDKNDEA 283

Query: 219 PYICTAQNPVSQRSSLPVHVGQFCTDPGASRGGTTGETVVGVLGEPVTLPLALPACRDTE 278
            YIC A+N   ++ +  +H+  F           T       L E VTL           
Sbjct: 284 EYICIAENKAGEQDA-TIHLKVFAKPKITYVENQTAME----LEEQVTLTCEASG-DPIP 337

Query: 279 KVVWLFNTSIISKEREEAATADPLIKSRDPYKNRVWVSSQDCSLKISQLKIEDAGPYHAY 338
            + W  +T  IS E E+      +++S           ++  SL +  ++  DAG Y   
Sbjct: 338 SITWRTSTRNISSE-EKTLDGHMVVRSH----------ARVSSLTLKSIQYTDAGEYICT 386

Query: 339 VCSEASSVTSMTHVTLLIYRRLRKPKITWSLRHSEDGICRISLTCSV-----------ED 387
             +     +   ++ +    +L+ P   ++   ++     +++TC V            D
Sbjct: 387 ASNTIGQDSQSMYLEVQYAPKLQGPVAVYTWEGNQ-----VNITCEVFAYPSATISWFRD 441

Query: 388 GGNTVMYTWTPLQKEAVVSQGESHLNVSWRSSENHPNLTCTASNPVSRSSHQFL 441
           G       ++ +  +   +   S+L V+  S  +  N  CTA N + + S +F+
Sbjct: 442 GQLLPSSNYSNI--KIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFI 493


>gi|115529478 neural cell adhesion molecule 1 isoform 3 [Homo
           sapiens]
          Length = 761

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 67/354 (18%), Positives = 131/354 (37%), Gaps = 62/354 (17%)

Query: 116 LCISNLTLNDAGSYKAQ--------INQRNFEVTTEEEFTLFVYEQLQEPQVTMKSVKVS 167
           L I  +   D G+Y+ +        IN ++ +V      T+         Q     V  +
Sbjct: 174 LQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTI---------QARQNIVNAT 224

Query: 168 ENFSCNITLMCSVKGAEKSVLYSWTPREPHASE---------SNGGSILTVSRTPCDPDL 218
            N   ++TL+C  +G  +  + SWT       +         S+  S LT+ +   + + 
Sbjct: 225 ANLGQSVTLVCDAEGFPEPTM-SWTKDGEQIEQEEDDEKYIFSDDSSQLTIKKVDKNDEA 283

Query: 219 PYICTAQNPVSQRSSLPVHVGQFCTDPGASRGGTTGETVVGVLGEPVTLPLALPACRDTE 278
            YIC A+N   ++ +  +H+  F           T       L E VTL           
Sbjct: 284 EYICIAENKAGEQDA-TIHLKVFAKPKITYVENQTAME----LEEQVTLTCEASG-DPIP 337

Query: 279 KVVWLFNTSIISKEREEAATADPLIKSRDPYKNRVWVSSQDCSLKISQLKIEDAGPYHAY 338
            + W  +T  IS E E+      +++S           ++  SL +  ++  DAG Y   
Sbjct: 338 SITWRTSTRNISSE-EKTLDGHMVVRSH----------ARVSSLTLKSIQYTDAGEYICT 386

Query: 339 VCSEASSVTSMTHVTLLIYRRLRKPKITWSLRHSEDGICRISLTCSV-----------ED 387
             +     +   ++ +    +L+ P   ++   ++     +++TC V            D
Sbjct: 387 ASNTIGQDSQSMYLEVQYAPKLQGPVAVYTWEGNQ-----VNITCEVFAYPSATISWFRD 441

Query: 388 GGNTVMYTWTPLQKEAVVSQGESHLNVSWRSSENHPNLTCTASNPVSRSSHQFL 441
           G       ++ +  +   +   S+L V+  S  +  N  CTA N + + S +F+
Sbjct: 442 GQLLPSSNYSNI--KIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFI 493


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.130    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,383,073
Number of Sequences: 37866
Number of extensions: 1370887
Number of successful extensions: 4039
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 124
Number of HSP's that attempted gapping in prelim test: 3781
Number of HSP's gapped (non-prelim): 320
length of query: 655
length of database: 18,247,518
effective HSP length: 109
effective length of query: 546
effective length of database: 14,120,124
effective search space: 7709587704
effective search space used: 7709587704
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.