Guide to the Human Genome
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Name: ZMIZ2 Sequence: fasta or formatted (920aa) NCBI GI: 54607108
Description:

zinc finger, MIZ-type containing 2 isoform 1

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [894aa] zinc finger, MIZ-type containing 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         74           6
 C cysteine            1.8         17           3
 D aspartate           2.7         25           2
 E glutamate           3.6         33           2
 F phenylalanine       2.7         25           1
 G glycine            10.4         96           2
 H histidine           2.7         25           2
 I isoleucine          2.4         22           1
 K lysine              2.6         24           2
 L leucine             9.0         83           2
 M methionine          2.6         24           2
 N asparagine          3.8         35           3
 P proline            13.6        125           3
 Q glutamine           6.3         58           2
 R arginine            3.3         30           2
 S serine              9.6         88           3
 T threonine           6.4         59           2
 V valine              4.9         45           2
 W tryptophan          0.5          5           1
 Y tyrosine            2.9         27           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger, MIZ-type containing 2 isoform 1 
ZMIZ2                 0.964   zinc finger, MIZ-type containing 2 isoform 2 
ZMIZ1                 0.564   retinoic acid induced 17 
PIAS2                 0.036   protein inhibitor of activated STAT X isoform alpha ...
PIAS2                 0.036   protein inhibitor of activated STAT X isoform beta [...
PIAS4                 0.033   protein inhibitor of activated STAT, 4 
PIAS1                 0.033   protein inhibitor of activated STAT, 1 
PIAS3                 0.030   protein inhibitor of activated STAT, 3 
POLR2A                0.023   DNA-directed RNA polymerase II A 
COL11A1               0.021   alpha 1 type XI collagen isoform B preproprotein [Ho...
COL11A1               0.021   alpha 1 type XI collagen isoform C preproprotein [Ho...
COL11A1               0.021   alpha 1 type XI collagen isoform A preproprotein [Ho...
PRR12                 0.021   proline rich 12 
COL1A1                0.020   alpha 1 type I collagen preproprotein 
TAF4                  0.019   TBP-associated factor 4 
ARID1A                0.019   AT rich interactive domain 1A isoform a 
ARID1A                0.019   AT rich interactive domain 1A isoform b 
ARID1B                0.019   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.019   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
COL10A1               0.019   type X collagen alpha 1 precursor 
COL16A1               0.019   alpha 1 type XVI collagen precursor 
ARID1B                0.019   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
COL2A1                0.019   collagen, type II, alpha 1 isoform 1 precursor [Hom...
COL2A1                0.019   collagen, type II, alpha 1 isoform 2 precursor [Hom...
COL11A2               0.019   collagen, type XI, alpha 2 isoform 2 preproprotein ...
COL11A2               0.019   collagen, type XI, alpha 2 isoform 3 preproprotein ...
COL11A2               0.019   collagen, type XI, alpha 2 isoform 1 preproprotein ...
COL4A5                0.018   type IV collagen alpha 5 isoform 2 precursor 
COL4A5                0.018   type IV collagen alpha 5 isoform 1 precursor 
COL4A5                0.018   type IV collagen alpha 5 isoform 3 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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