Search of human proteins with 5453577

Search of human proteins with 5453577

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|5453577 chemokine (C-X-C motif) ligand 13 (B-cell
chemoattractant) [Homo sapiens]
         (109 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|5453577 chemokine (C-X-C motif) ligand 13 (B-cell chemoattrac...   219   4e-58
gi|10834978 interleukin 8 precursor [Homo sapiens]                     55   1e-08
gi|149999382 small inducible cytokine B10 precursor [Homo sapiens]     51   2e-07
gi|4506851 chemokine (C-X-C motif) ligand 6 (granulocyte chemota...    49   7e-07
gi|4506849 chemokine (C-X-C motif) ligand 5 precursor [Homo sapi...    45   1e-05
gi|54144650 chemokine (C-X-C motif) ligand 3 [Homo sapiens]            45   1e-05
gi|4506827 small inducible cytokine A11 precursor [Homo sapiens]       44   2e-05
gi|4504155 chemokine (C-X-C motif) ligand 2 [Homo sapiens]             43   6e-05
gi|4505981 pro-platelet basic protein precursor [Homo sapiens]         43   6e-05
gi|4504153 chemokine (C-X-C motif) ligand 1 [Homo sapiens]             41   2e-04
gi|13435402 chemokine (C-C motif) ligand 7 precursor [Homo sapiens]    39   7e-04
gi|4505733 platelet factor 4 (chemokine (C-X-C motif) ligand 4) ...    39   0.001
gi|4506831 small inducible cytokine A18 precursor [Homo sapiens]       38   0.002
gi|4505735 platelet factor 4 variant 1 [Homo sapiens]                  37   0.004
gi|22538816 small inducible cytokine A8 precursor [Homo sapiens]       35   0.010
gi|10834988 chemokine (C-X-C motif) ligand 12 (stromal cell-deri...    35   0.017
gi|76563933 chemokine (C-X-C motif) ligand 12 (stromal cell-deri...    34   0.029
gi|40316924 chemokine (C-X-C motif) ligand 12 (stromal cell-deri...    34   0.029
gi|4506843 chemokine (C-C motif) ligand 3 [Homo sapiens]               33   0.038
gi|4506841 small inducible cytokine A2 precursor [Homo sapiens]        33   0.038
gi|4885587 small inducible cytokine A13 precursor [Homo sapiens]       33   0.038
gi|4759074 small inducible cytokine A16 precursor [Homo sapiens]       33   0.049
gi|4506835 small inducible cytokine A21 precursor [Homo sapiens]       33   0.049
gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Hom...    32   0.084
gi|93589094 chemokine (C-C motif) ligand 3-like 3 precursor [Hom...    32   0.084
gi|4506845 chemokine C-C motif ligand 4 isoform 1 precursor [Hom...    32   0.14 
gi|22165427 small inducible cytokine A24 precursor [Homo sapiens]      31   0.19 
gi|4506855 chemokine (C motif) ligand 2 [Homo sapiens]                 31   0.19 
gi|5174671 chemokine (C-C motif) ligand 26 precursor [Homo sapiens]    31   0.24 
gi|4885589 small inducible cytokine B11 precursor [Homo sapiens]       30   0.32 

>gi|5453577 chemokine (C-X-C motif) ligand 13 (B-cell
           chemoattractant) [Homo sapiens]
          Length = 109

 Score =  219 bits (558), Expect = 4e-58
 Identities = 109/109 (100%), Positives = 109/109 (100%)

Query: 1   MKFISTSLLLMLLVSSLSPVQGVLEVYYTSLRCRCVQESSVFIPRRFIDRIQILPRGNGC 60
           MKFISTSLLLMLLVSSLSPVQGVLEVYYTSLRCRCVQESSVFIPRRFIDRIQILPRGNGC
Sbjct: 1   MKFISTSLLLMLLVSSLSPVQGVLEVYYTSLRCRCVQESSVFIPRRFIDRIQILPRGNGC 60

Query: 61  PRKEIIVWKKNKSIVCVDPQAEWIQRMMEVLRKRSSSTLPVPVFKRKIP 109
           PRKEIIVWKKNKSIVCVDPQAEWIQRMMEVLRKRSSSTLPVPVFKRKIP
Sbjct: 61  PRKEIIVWKKNKSIVCVDPQAEWIQRMMEVLRKRSSSTLPVPVFKRKIP 109


>gi|10834978 interleukin 8 precursor [Homo sapiens]
          Length = 99

 Score = 55.1 bits (131), Expect = 1e-08
 Identities = 28/95 (29%), Positives = 51/95 (53%)

Query: 4  ISTSLLLMLLVSSLSPVQGVLEVYYTSLRCRCVQESSVFIPRRFIDRIQILPRGNGCPRK 63
          ++ +LL   L+S+      VL      LRC+C++  S     +FI  ++++  G  C   
Sbjct: 5  LAVALLAAFLISAALCEGAVLPRSAKELRCQCIKTYSKPFHPKFIKELRVIESGPHCANT 64

Query: 64 EIIVWKKNKSIVCVDPQAEWIQRMMEVLRKRSSST 98
          EIIV   +   +C+DP+  W+QR++E   KR+ ++
Sbjct: 65 EIIVKLSDGRELCLDPKENWVQRVVEKFLKRAENS 99


>gi|149999382 small inducible cytokine B10 precursor [Homo sapiens]
          Length = 98

 Score = 50.8 bits (120), Expect = 2e-07
 Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 3/94 (3%)

Query: 8   LLLMLLVSSLSPVQGVLEVYYTSLRCRCVQESSVFIPRRFIDRIQILPRGNGCPRKEIIV 67
           L+  L+  +LS +QGV      ++RC C+  S+  +  R +++++I+P    CPR EII 
Sbjct: 7   LICCLIFLTLSGIQGV--PLSRTVRCTCISISNQPVNPRSLEKLEIIPASQFCPRVEIIA 64

Query: 68  WKKNKSIV-CVDPQAEWIQRMMEVLRKRSSSTLP 100
             K K    C++P+++ I+ +++ + K  S   P
Sbjct: 65  TMKKKGEKRCLNPESKAIKNLLKAVSKERSKRSP 98


>gi|4506851 chemokine (C-X-C motif) ligand 6 (granulocyte
           chemotactic protein 2) [Homo sapiens]
          Length = 114

 Score = 49.3 bits (116), Expect = 7e-07
 Identities = 25/84 (29%), Positives = 49/84 (58%), Gaps = 3/84 (3%)

Query: 8   LLLMLLVSSLSPVQ--GVLEVYYTSLRCRCVQESSVFIPRRFIDRIQILPRGNGCPRKEI 65
           L L+LL++   P+   G +    T LRC C++ +    P+  I ++Q+ P G  C + E+
Sbjct: 22  LALLLLLTPPGPLASAGPVSAVLTELRCTCLRVTLRVNPKT-IGKLQVFPAGPQCSKVEV 80

Query: 66  IVWKKNKSIVCVDPQAEWIQRMME 89
           +   KN   VC+DP+A +++++++
Sbjct: 81  VASLKNGKQVCLDPEAPFLKKVIQ 104


>gi|4506849 chemokine (C-X-C motif) ligand 5 precursor [Homo
           sapiens]
          Length = 114

 Score = 45.4 bits (106), Expect = 1e-05
 Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 3/84 (3%)

Query: 8   LLLMLLVSSLSPVQ--GVLEVYYTSLRCRCVQESSVFIPRRFIDRIQILPRGNGCPRKEI 65
           L+L+LL++   P+   G        LRC C+Q +    P+  I  +Q+   G  C + E+
Sbjct: 22  LVLLLLLTQPGPIASAGPAAAVLRELRCVCLQTTQGVHPK-MISNLQVFAIGPQCSKVEV 80

Query: 66  IVWKKNKSIVCVDPQAEWIQRMME 89
           +   KN   +C+DP+A +++++++
Sbjct: 81  VASLKNGKEICLDPEAPFLKKVIQ 104


>gi|54144650 chemokine (C-X-C motif) ligand 3 [Homo sapiens]
          Length = 107

 Score = 45.1 bits (105), Expect = 1e-05
 Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 3/96 (3%)

Query: 2   KFISTSLLLMLLVSSLSPVQGVLEVYYTSLRCRCVQESSVFIPRRFIDRIQILPRGNGCP 61
           + +  +LLL+LLV++     G   V  T LRC+C+Q     I  + I  + +   G  C 
Sbjct: 14  RLLRVALLLLLLVAASRRAAGASVV--TELRCQCLQTLQG-IHLKNIQSVNVRSPGPHCA 70

Query: 62  RKEIIVWKKNKSIVCVDPQAEWIQRMMEVLRKRSSS 97
           + E+I   KN    C++P +  +Q+++E +  + S+
Sbjct: 71  QTEVIATLKNGKKACLNPASPMVQKIIEKILNKGST 106


>gi|4506827 small inducible cytokine A11 precursor [Homo sapiens]
          Length = 97

 Score = 44.3 bits (103), Expect = 2e-05
 Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 2/97 (2%)

Query: 4   ISTSLLLMLLVSSLSPVQGVLEVYYTSLRCRCVQESSVFIPRRFIDRIQILPRGNGCPRK 63
           +S +LL +LL+++    QG+         C C   ++  IP + ++  + +  G  CP+K
Sbjct: 3   VSAALLWLLLIAAAFSPQGLAGPASVPTTC-CFNLANRKIPLQRLESYRRITSGK-CPQK 60

Query: 64  EIIVWKKNKSIVCVDPQAEWIQRMMEVLRKRSSSTLP 100
            +I   K    +C DP+ +W+Q  M+ L ++S +  P
Sbjct: 61  AVIFKTKLAKDICADPKKKWVQDSMKYLDQKSPTPKP 97


>gi|4504155 chemokine (C-X-C motif) ligand 2 [Homo sapiens]
          Length = 107

 Score = 42.7 bits (99), Expect = 6e-05
 Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 3/96 (3%)

Query: 2   KFISTSLLLMLLVSSLSPVQGVLEVYYTSLRCRCVQESSVFIPRRFIDRIQILPRGNGCP 61
           + +  +LLL+LLV++     G      T LRC+C+Q     I  + I  +++   G  C 
Sbjct: 14  RLLRVALLLLLLVAASRRAAGA--PLATELRCQCLQTLQG-IHLKNIQSVKVKSPGPHCA 70

Query: 62  RKEIIVWKKNKSIVCVDPQAEWIQRMMEVLRKRSSS 97
           + E+I   KN    C++P +  +++++E + K   S
Sbjct: 71  QTEVIATLKNGQKACLNPASPMVKKIIEKMLKNGKS 106


>gi|4505981 pro-platelet basic protein precursor [Homo sapiens]
          Length = 128

 Score = 42.7 bits (99), Expect = 6e-05
 Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 1/62 (1%)

Query: 28  YTSLRCRCVQESSVFIPRRFIDRIQILPRGNGCPRKEIIVWKKNKSIVCVDPQAEWIQRM 87
           Y  LRC C++ +S   P+  I  ++++ +G  C + E+I   K+   +C+DP A  I+++
Sbjct: 58  YAELRCMCIKTTSGIHPKN-IQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKI 116

Query: 88  ME 89
           ++
Sbjct: 117 VQ 118


>gi|4504153 chemokine (C-X-C motif) ligand 1 [Homo sapiens]
          Length = 107

 Score = 41.2 bits (95), Expect = 2e-04
 Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 3/96 (3%)

Query: 2   KFISTSLLLMLLVSSLSPVQGVLEVYYTSLRCRCVQESSVFIPRRFIDRIQILPRGNGCP 61
           + +  +LLL+LLV++     G      T LRC+C+Q      P+  I  + +   G  C 
Sbjct: 14  RLLRVALLLLLLVAAGRRAAGASVA--TELRCQCLQTLQGIHPKN-IQSVNVKSPGPHCA 70

Query: 62  RKEIIVWKKNKSIVCVDPQAEWIQRMMEVLRKRSSS 97
           + E+I   KN    C++P +  +++++E +     S
Sbjct: 71  QTEVIATLKNGRKACLNPASPIVKKIIEKMLNSDKS 106


>gi|13435402 chemokine (C-C motif) ligand 7 precursor [Homo
          sapiens]
          Length = 99

 Score = 39.3 bits (90), Expect = 7e-04
 Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 4/95 (4%)

Query: 5  STSLLLMLLVSSLSPVQGVLEVY--YTSLRCRCVQESSVFIPRRFIDRIQILPRGNGCPR 62
          S +LL +LL ++    QG+ +     TS  C C +  +  IP++ ++  +     + CPR
Sbjct: 4  SAALLCLLLTAAAFSPQGLAQPVGINTSTTC-CYRFINKKIPKQRLESYRRTTSSH-CPR 61

Query: 63 KEIIVWKKNKSIVCVDPQAEWIQRMMEVLRKRSSS 97
          + +I   K    +C DP  +W+Q  M+ L K++ +
Sbjct: 62 EAVIFKTKLDKEICADPTQKWVQDFMKHLDKKTQT 96


>gi|4505733 platelet factor 4 (chemokine (C-X-C motif) ligand 4)
          [Homo sapiens]
          Length = 101

 Score = 38.5 bits (88), Expect = 0.001
 Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 4/84 (4%)

Query: 8  LLLMLLVSSLSPVQGVLEVYYTSLRCRCVQESSVFIPRRFIDRIQILPRGNGCPRKEIIV 67
          LLL+ LV + +  +   +     L+C CV+ +S   PR  I  ++++  G  CP  ++I 
Sbjct: 19 LLLLPLVVAFASAEAEED---GDLQCLCVKTTSQVRPRH-ITSLEVIKAGPHCPTAQLIA 74

Query: 68 WKKNKSIVCVDPQAEWIQRMMEVL 91
            KN   +C+D QA   +++++ L
Sbjct: 75 TLKNGRKICLDLQAPLYKKIIKKL 98


>gi|4506831 small inducible cytokine A18 precursor [Homo sapiens]
          Length = 89

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 8/93 (8%)

Query: 1  MKFISTSLLLMLLVSSLSPVQGVLEVYYTSLRCRCVQESSVFIPRRFI-DRIQILPRGNG 59
          MK ++ +LL+++   +L     V     T+    C+  +S  IP++FI D  +  P+   
Sbjct: 1  MKGLAAALLVLVCTMALCSCAQV----GTNKELCCLVYTSWQIPQKFIVDYSETSPQ--- 53

Query: 60 CPRKEIIVWKKNKSIVCVDPQAEWIQRMMEVLR 92
          CP+  +I+  K    +C DP  +W+Q+ +  L+
Sbjct: 54 CPKPGVILLTKRGRQICADPNKKWVQKYISDLK 86


>gi|4505735 platelet factor 4 variant 1 [Homo sapiens]
          Length = 104

 Score = 36.6 bits (83), Expect = 0.004
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 31 LRCRCVQESSVFIPRRFIDRIQILPRGNGCPRKEIIVWKKNKSIVCVDPQA 81
          L+C CV+ +S   PR  I  ++++  G  CP  ++I   KN   +C+D QA
Sbjct: 42 LQCLCVKTTSQVRPRH-ITSLEVIKAGPHCPTAQLIATLKNGRKICLDLQA 91


>gi|22538816 small inducible cytokine A8 precursor [Homo sapiens]
          Length = 99

 Score = 35.4 bits (80), Expect = 0.010
 Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 4/90 (4%)

Query: 4  ISTSLLLMLLVSSLSPVQGVLEVYYTSLRCRCVQESSVFIPRRFIDRIQILPRGNG--CP 61
          +S +LL +LL+++    QG+ +    S+   C    +V   +  I R++   R     CP
Sbjct: 3  VSAALLCLLLMAATFSPQGLAQPDSVSIPITCC--FNVINRKIPIQRLESYTRITNIQCP 60

Query: 62 RKEIIVWKKNKSIVCVDPQAEWIQRMMEVL 91
          ++ +I   K    VC DP+  W++  M+ L
Sbjct: 61 KEAVIFKTKRGKEVCADPKERWVRDSMKHL 90


>gi|10834988 chemokine (C-X-C motif) ligand 12 (stromal
          cell-derived factor 1) isoform beta [Homo sapiens]
          Length = 93

 Score = 34.7 bits (78), Expect = 0.017
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 5/88 (5%)

Query: 8  LLLMLLVSSLSPVQGVLEVYYTSLRCRCVQESSVFIPRRFIDRIQILPRGNGCPRKEIIV 67
          ++L+L++++L    G  +    S RC C    S  + R  +  ++IL   N C  + +  
Sbjct: 7  VVLVLVLTALCLSDG--KPVSLSYRCPCRFFES-HVARANVKHLKILNTPN-CALQIVAR 62

Query: 68 WKKNKSIVCVDPQAEWIQRMME-VLRKR 94
           K N   VC+DP+ +WIQ  +E  L KR
Sbjct: 63 LKNNNRQVCIDPKLKWIQEYLEKALNKR 90


>gi|76563933 chemokine (C-X-C motif) ligand 12 (stromal
          cell-derived factor 1) isoform gamma [Homo sapiens]
          Length = 119

 Score = 33.9 bits (76), Expect = 0.029
 Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 8  LLLMLLVSSLSPVQGVLEVYYTSLRCRCVQESSVFIPRRFIDRIQILPRGNGCPRKEIIV 67
          ++L+L++++L    G  +    S RC C    S  + R  +  ++IL   N C  + +  
Sbjct: 7  VVLVLVLTALCLSDG--KPVSLSYRCPCRFFES-HVARANVKHLKILNTPN-CALQIVAR 62

Query: 68 WKKNKSIVCVDPQAEWIQRMME 89
           K N   VC+DP+ +WIQ  +E
Sbjct: 63 LKNNNRQVCIDPKLKWIQEYLE 84


>gi|40316924 chemokine (C-X-C motif) ligand 12 (stromal
          cell-derived factor 1) isoform alpha [Homo sapiens]
          Length = 89

 Score = 33.9 bits (76), Expect = 0.029
 Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 8  LLLMLLVSSLSPVQGVLEVYYTSLRCRCVQESSVFIPRRFIDRIQILPRGNGCPRKEIIV 67
          ++L+L++++L    G  +    S RC C    S  + R  +  ++IL   N C  + +  
Sbjct: 7  VVLVLVLTALCLSDG--KPVSLSYRCPCRFFES-HVARANVKHLKILNTPN-CALQIVAR 62

Query: 68 WKKNKSIVCVDPQAEWIQRMME 89
           K N   VC+DP+ +WIQ  +E
Sbjct: 63 LKNNNRQVCIDPKLKWIQEYLE 84


>gi|4506843 chemokine (C-C motif) ligand 3 [Homo sapiens]
          Length = 92

 Score = 33.5 bits (75), Expect = 0.038
 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 2/88 (2%)

Query: 4  ISTSLLLMLLVSSLSPVQGVLEVYYTSLRCRCVQESSVFIPRRFIDRIQILPRGNGCPRK 63
          +ST+ L +LL +     Q    +   +    C   +S  IP+ FI         + C + 
Sbjct: 3  VSTAALAVLLCTMALCNQFSASLAADTPTACCFSYTSRQIPQNFI--ADYFETSSQCSKP 60

Query: 64 EIIVWKKNKSIVCVDPQAEWIQRMMEVL 91
           +I   K    VC DP  EW+Q+ +  L
Sbjct: 61 GVIFLTKRSRQVCADPSEEWVQKYVSDL 88


>gi|4506841 small inducible cytokine A2 precursor [Homo sapiens]
          Length = 99

 Score = 33.5 bits (75), Expect = 0.038
 Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 6/97 (6%)

Query: 4  ISTSLLLMLLVSSLSPVQGVLEVYYTSLRCRCVQESSVFIPRRF-IDRIQILPR--GNGC 60
          +S +LL +LL+++    QG+ +    +    C      F  R+  + R+    R   + C
Sbjct: 3  VSAALLCLLLIAATFIPQGLAQPDAINAPVTCCYN---FTNRKISVQRLASYRRITSSKC 59

Query: 61 PRKEIIVWKKNKSIVCVDPQAEWIQRMMEVLRKRSSS 97
          P++ +I        +C DP+ +W+Q  M+ L K++ +
Sbjct: 60 PKEAVIFKTIVAKEICADPKQKWVQDSMDHLDKQTQT 96


>gi|4885587 small inducible cytokine A13 precursor [Homo sapiens]
          Length = 98

 Score = 33.5 bits (75), Expect = 0.038
 Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 4/96 (4%)

Query: 1  MKFISTSLLLMLLVSSLSPVQGVLEVYYTSLRCRCVQE-SSVFIPRRFIDRIQILPRGNG 59
          MK  +  L L+L+ ++ +P QG+ +    ++   C    SS  I  + +    I    + 
Sbjct: 1  MKVSAVLLCLLLMTAAFNP-QGLAQPDALNVPSTCCFTFSSKKISLQRLKSYVITT--SR 57

Query: 60 CPRKEIIVWKKNKSIVCVDPQAEWIQRMMEVLRKRS 95
          CP+K +I   K    +C DP+ +W+Q  M+ L +++
Sbjct: 58 CPQKAVIFRTKLGKEICADPKEKWVQNYMKHLGRKA 93


>gi|4759074 small inducible cytokine A16 precursor [Homo sapiens]
          Length = 120

 Score = 33.1 bits (74), Expect = 0.049
 Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 8/107 (7%)

Query: 8   LLLMLLVSSLSPVQGVLEVYYTSLRCRCVQESSVFIPRRFIDRIQILPRGNGCPRKEIIV 67
           L+L+L+++S S  Q  +  +  +    C++     +PRR +   +   +   C    II 
Sbjct: 11  LVLILIITSASRSQPKVPEWVNTPSTCCLKYYEKVLPRRLVVGYR---KALNCHLPAIIF 67

Query: 68  WKKNKSIVCVDPQAEWIQRMME-----VLRKRSSSTLPVPVFKRKIP 109
             K    VC +P  +W+Q  ++     +L  R+ ST+ +   K   P
Sbjct: 68  VTKRNREVCTNPNDDWVQEYIKDPNLPLLPTRNLSTVKIITAKNGQP 114


>gi|4506835 small inducible cytokine A21 precursor [Homo sapiens]
          Length = 134

 Score = 33.1 bits (74), Expect = 0.049
 Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 6/99 (6%)

Query: 4   ISTSLLLMLLVSSLSPVQGVLEVYYTSLRCRCVQESSVFIPRRFIDRIQILPRGNGCPRK 63
           ++ SLL+++L   +   QG         +  C++ S   IP + +   +      GC   
Sbjct: 5   LALSLLILVLAFGIPRTQGS----DGGAQDCCLKYSQRKIPAKVVRSYRKQEPSLGCSIP 60

Query: 64  EIIVW--KKNKSIVCVDPQAEWIQRMMEVLRKRSSSTLP 100
            I+    K++++ +C DP+  W+Q++M+ L K  S   P
Sbjct: 61  AILFLPRKRSQAELCADPKELWVQQLMQHLDKTPSPQKP 99


>gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Homo
          sapiens]
          Length = 93

 Score = 32.3 bits (72), Expect = 0.084
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 35 CVQESSVFIPRRFIDRIQILPRGNGCPRKEIIVWKKNKSIVCVDPQAEWIQRMMEVL 91
          C   +S  IP+ FI         + C +  +I   K    VC DP  EW+Q+ +  L
Sbjct: 35 CFSYTSRQIPQNFI--ADYFETSSQCSKPSVIFLTKRGRQVCADPSEEWVQKYVSDL 89


>gi|93589094 chemokine (C-C motif) ligand 3-like 3 precursor [Homo
          sapiens]
          Length = 93

 Score = 32.3 bits (72), Expect = 0.084
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 35 CVQESSVFIPRRFIDRIQILPRGNGCPRKEIIVWKKNKSIVCVDPQAEWIQRMMEVL 91
          C   +S  IP+ FI         + C +  +I   K    VC DP  EW+Q+ +  L
Sbjct: 35 CFSYTSRQIPQNFI--ADYFETSSQCSKPSVIFLTKRGRQVCADPSEEWVQKYVSDL 89


>gi|4506845 chemokine C-C motif ligand 4 isoform 1 precursor [Homo
          sapiens]
          Length = 92

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 4/86 (4%)

Query: 1  MKFISTSLLLMLLVSSL-SPVQGVLEVYYTSLRCRCVQESSVFIPRRFIDRIQILPRGNG 59
          MK   T L L++LV++  SP             C C   ++  +PR F+  +      + 
Sbjct: 1  MKLCVTVLSLLMLVAAFCSPALSAPMGSDPPTAC-CFSYTARKLPRNFV--VDYYETSSL 57

Query: 60 CPRKEIIVWKKNKSIVCVDPQAEWIQ 85
          C +  ++   K    VC DP   W+Q
Sbjct: 58 CSQPAVVFQTKRSKQVCADPSESWVQ 83


>gi|22165427 small inducible cytokine A24 precursor [Homo sapiens]
          Length = 119

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 1/66 (1%)

Query: 35  CVQESSVFIPRRFIDRIQILPRGNGCPRKEIIVWKKNKSIVCVDPQAEWIQRMMEVLRKR 94
           C+   S  IP   +   Q+  R   C +  +I   K     C DP+ EW+QR M+ L  +
Sbjct: 34  CMFFVSKRIPENRVVSYQLSSRST-CLKAGVIFTTKKGQQFCGDPKQEWVQRYMKNLDAK 92

Query: 95  SSSTLP 100
                P
Sbjct: 93  QKKASP 98


>gi|4506855 chemokine (C motif) ligand 2 [Homo sapiens]
          Length = 114

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 8/92 (8%)

Query: 8  LLLMLLVSSLSP--VQGVLEVYYTSLRCRCVQESSVFIPRRFIDRIQILPRGNGCPRKEI 65
          +L +L + SL+   V+GV      S R  CV  ++  +P   + RI+      G  R  I
Sbjct: 5  ILALLGICSLTAYIVEGVGSE--VSHRRTCVSLTTQRLP---VSRIKTYTITEGSLRAVI 59

Query: 66 IVWKKNKSIVCVDPQAEWIQRMMEVLRKRSSS 97
           + K+    VC DPQA W++ ++  + ++S++
Sbjct: 60 FITKRGLK-VCADPQATWVRDVVRSMDRKSNT 90


>gi|5174671 chemokine (C-C motif) ligand 26 precursor [Homo
          sapiens]
          Length = 94

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 35 CVQESSVFIPRRFIDRIQILPRGNGCPRKEIIVWKKNKSIVCVDPQAEWIQRMMEVLR 92
          C Q S   +P  ++   +     N C ++ +I   K    VC  P+ +W+Q+ + +L+
Sbjct: 34 CFQYSHKPLPWTWVRSYEFT--SNSCSQRAVIFTTKRGKKVCTHPRKKWVQKYISLLK 89


>gi|4885589 small inducible cytokine B11 precursor [Homo sapiens]
          Length = 94

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 14/65 (21%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 32 RCRCVQESSVFIPRRFIDRIQILPRGNGCPRKEIIV-WKKNKSIVCVDPQAEWIQRMMEV 90
          RC C+      +    I++  I+   N C + E+I+  K+NK   C++P+++  + +++ 
Sbjct: 29 RCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQARLIIKK 88

Query: 91 LRKRS 95
          + +++
Sbjct: 89 VERKN 93


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.327    0.139    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,963,443
Number of Sequences: 37866
Number of extensions: 150215
Number of successful extensions: 461
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 416
Number of HSP's gapped (non-prelim): 52
length of query: 109
length of database: 18,247,518
effective HSP length: 79
effective length of query: 30
effective length of database: 15,256,104
effective search space: 457683120
effective search space used: 457683120
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.