PF4V1 29125

Name: PF4V1	Sequence: fasta or formatted (104aa)		NCBI GI: 4505735
Description: platelet factor 4 variant 1		Referenced in: Chemokines and Their Receptors Platelets and Megakaryocytes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.5 12 2 C cysteine 3.8 4 1 D aspartate 2.9 3 1 E glutamate 6.7 7 2 F phenylalanine 1.9 2 1 G glycine 2.9 3 1 H histidine 2.9 3 1 I isoleucine 5.8 6 2 K lysine 6.7 7 2 L leucine 16.3 17 4 M methionine 1.9 2 1 N asparagine 1.0 1 1 P proline 3.8 4 1 Q glutamine 4.8 5 1 R arginine 7.7 8 1 S serine 5.8 6 2 T threonine 6.7 7 2 V valine 5.8 6 3 W tryptophan 0.0 0 0 Y tyrosine 1.0 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 platelet factor 4 variant 1 PF4 0.775 platelet factor 4 (chemokine (C-X-C motif) ligand 4) ... CXCL1 0.281 chemokine (C-X-C motif) ligand 1 PPBP 0.281 pro-platelet basic protein precursor CXCL5 0.258 chemokine (C-X-C motif) ligand 5 precursor CXCL6 0.247 chemokine (C-X-C motif) ligand 6 (granulocyte chemota... CXCL2 0.247 chemokine (C-X-C motif) ligand 2 CXCL3 0.219 chemokine (C-X-C motif) ligand 3 IL8 0.169 interleukin 8 precursor PPBPL1 0.129 pro-platelet basic protein-like 1 CXCL10 0.118 small inducible cytokine B10 precursor CXCL9 0.084 small inducible cytokine B9 precursor CXCL13 0.067 chemokine (C-X-C motif) ligand 13 (B-cell chemoattrac... CXCL14 0.051 small inducible cytokine B14 precursor CCL18 0.051 small inducible cytokine A18 precursor LOC100129103 0.022 PREDICTED: similar to hCG2038970 LOC100129103 0.022 PREDICTED: similar to hCG2038970 FAM22B 0.011 PREDICTED: hypothetical protein isoform 1 FAM22D 0.011 hypothetical protein LOC728130 FAM22A 0.011 hypothetical protein LOC728118 NCOR2 0.011 nuclear receptor co-repressor 2 isoform 2 NCOR2 0.011 nuclear receptor co-repressor 2 isoform 1 ARHGEF19 0.011 Rho guanine nucleotide exchange factor (GEF) 19 [Hom... PCSK9 0.006 proprotein convertase subtilisin/kexin type 9 prepro... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.