PF4 29124

Name: PF4	Sequence: fasta or formatted (101aa)		NCBI GI: 4505733
Description: platelet factor 4 (chemokine (C-X-C motif) ligand 4)		Referenced in: Chemokines and Their Receptors Platelets and Megakaryocytes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.9 11 2 C cysteine 5.0 5 1 D aspartate 3.0 3 1 E glutamate 5.0 5 2 F phenylalanine 3.0 3 1 G glycine 5.9 6 1 H histidine 2.0 2 1 I isoleucine 5.9 6 2 K lysine 7.9 8 2 L leucine 17.8 18 4 M methionine 1.0 1 1 N asparagine 1.0 1 1 P proline 5.9 6 1 Q glutamine 4.0 4 1 R arginine 4.0 4 1 S serine 6.9 7 2 T threonine 5.0 5 2 V valine 5.0 5 2 W tryptophan 0.0 0 0 Y tyrosine 1.0 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 platelet factor 4 (chemokine (C-X-C motif) ligand 4) ... PF4V1 0.784 platelet factor 4 variant 1 CXCL1 0.324 chemokine (C-X-C motif) ligand 1 PPBP 0.312 pro-platelet basic protein precursor CXCL5 0.307 chemokine (C-X-C motif) ligand 5 precursor CXCL2 0.284 chemokine (C-X-C motif) ligand 2 CXCL6 0.284 chemokine (C-X-C motif) ligand 6 (granulocyte chemota... CXCL3 0.278 chemokine (C-X-C motif) ligand 3 IL8 0.188 interleukin 8 precursor PPBPL1 0.165 pro-platelet basic protein-like 1 CXCL10 0.125 small inducible cytokine B10 precursor CXCL9 0.102 small inducible cytokine B9 precursor CXCL13 0.080 chemokine (C-X-C motif) ligand 13 (B-cell chemoattrac... CCL18 0.051 small inducible cytokine A18 precursor CXCL14 0.045 small inducible cytokine B14 precursor LOC100129103 0.028 PREDICTED: similar to hCG2038970 LOC100129103 0.028 PREDICTED: similar to hCG2038970 CCL19 0.023 small inducible cytokine A19 precursor CXCL12 0.017 chemokine (C-X-C motif) ligand 12 (stromal cell-deri... CXCL12 0.017 chemokine (C-X-C motif) ligand 12 (stromal cell-deri... CXCL12 0.017 chemokine (C-X-C motif) ligand 12 (stromal cell-deri... NCOR2 0.011 nuclear receptor co-repressor 2 isoform 2 NCOR2 0.011 nuclear receptor co-repressor 2 isoform 1 FAM22B 0.011 PREDICTED: hypothetical protein isoform 1 FAM22D 0.011 hypothetical protein LOC728130 FAM22A 0.011 hypothetical protein LOC728118 HS3ST3B1 0.006 heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3... CCL22 0.006 small inducible cytokine A22 precursor CCL3L1 0.006 chemokine (C-C motif) ligand 3-like 1 precursor [Hom... XCL2 0.006 chemokine (C motif) ligand 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.