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Search of human proteins with 54144629
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|54144629 numb homolog isoform 4 [Homo sapiens]
(592 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|54144629 numb homolog isoform 4 [Homo sapiens] 1202 0.0
gi|54144627 numb homolog isoform 2 [Homo sapiens] 1193 0.0
gi|20070356 numb homolog isoform 3 [Homo sapiens] 1179 0.0
gi|54144625 numb homolog isoform 1 [Homo sapiens] 1170 0.0
gi|10863899 numb homolog (Drosophila)-like [Homo sapiens] 597 e-170
gi|7705318 GULP, engulfment adaptor PTB domain containing 1 [Hom... 82 2e-15
gi|132626790 low density lipoprotein receptor adaptor protein 1 ... 77 3e-14
gi|33350928 disabled homolog 1 [Homo sapiens] 65 2e-10
gi|50511947 cajalin 2 isoform b [Homo sapiens] 59 1e-08
gi|50511945 cajalin 2 isoform a [Homo sapiens] 59 1e-08
gi|10047134 cajalin 2 isoform c [Homo sapiens] 59 1e-08
gi|140161500 ankyrin repeat and sterile alpha motif domain conta... 56 8e-08
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 53 7e-07
gi|31317301 nitric oxide synthase 1 (neuronal) adaptor protein i... 51 3e-06
gi|148491082 disabled homolog 2 [Homo sapiens] 51 3e-06
gi|21327715 transcription elongation regulator 1 isoform 1 [Homo... 50 6e-06
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 49 1e-05
gi|91208418 transcription elongation regulator 1 isoform 2 [Homo... 48 3e-05
gi|153792074 proline rich 12 [Homo sapiens] 48 3e-05
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 47 5e-05
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 47 5e-05
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 47 5e-05
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 47 5e-05
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 47 6e-05
gi|91208420 bassoon protein [Homo sapiens] 45 1e-04
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 45 2e-04
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 45 2e-04
gi|7662236 TSC22 domain family, member 2 [Homo sapiens] 44 3e-04
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 44 4e-04
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 44 4e-04
>gi|54144629 numb homolog isoform 4 [Homo sapiens]
Length = 592
Score = 1202 bits (3109), Expect = 0.0
Identities = 592/592 (100%), Positives = 592/592 (100%)
Query: 1 MNKLRQSFRRKKDVYVPEASRPHQWQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICED 60
MNKLRQSFRRKKDVYVPEASRPHQWQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICED
Sbjct: 1 MNKLRQSFRRKKDVYVPEASRPHQWQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICED 60
Query: 61 AVKRLKATGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYIC 120
AVKRLKATGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYIC
Sbjct: 61 AVKRLKATGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYIC 120
Query: 121 RDGTTRRWICHCFMAVKDTGERLSHAVGCAFAACLERKQKREKECGVTATFDASRTTFTR 180
RDGTTRRWICHCFMAVKDTGERLSHAVGCAFAACLERKQKREKECGVTATFDASRTTFTR
Sbjct: 121 RDGTTRRWICHCFMAVKDTGERLSHAVGCAFAACLERKQKREKECGVTATFDASRTTFTR 180
Query: 181 EGSFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAPSPSSPTSPTSDATT 240
EGSFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAPSPSSPTSPTSDATT
Sbjct: 181 EGSFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAPSPSSPTSPTSDATT 240
Query: 241 SLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLRINELPSTMQRKTDF 300
SLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLRINELPSTMQRKTDF
Sbjct: 241 SLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLRINELPSTMQRKTDF 300
Query: 301 PIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQSPTFQGTEWGQ 360
PIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQSPTFQGTEWGQ
Sbjct: 301 PIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQSPTFQGTEWGQ 360
Query: 361 SSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPA 420
SSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPA
Sbjct: 361 SSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPA 420
Query: 421 SPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVF 480
SPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVF
Sbjct: 421 SPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVF 480
Query: 481 GTAGHPQAAHPHQSPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAAFNGVDDGRLAS 540
GTAGHPQAAHPHQSPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAAFNGVDDGRLAS
Sbjct: 481 GTAGHPQAAHPHQSPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAAFNGVDDGRLAS 540
Query: 541 ADRHTEVPTGTCPVDPFEAQWAALENKSKQRTNPSPTNPFSSDLQKTFEIEL 592
ADRHTEVPTGTCPVDPFEAQWAALENKSKQRTNPSPTNPFSSDLQKTFEIEL
Sbjct: 541 ADRHTEVPTGTCPVDPFEAQWAALENKSKQRTNPSPTNPFSSDLQKTFEIEL 592
>gi|54144627 numb homolog isoform 2 [Homo sapiens]
Length = 603
Score = 1193 bits (3087), Expect = 0.0
Identities = 592/603 (98%), Positives = 592/603 (98%), Gaps = 11/603 (1%)
Query: 1 MNKLRQSFRRKKDVYVPEASRPHQWQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICED 60
MNKLRQSFRRKKDVYVPEASRPHQWQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICED
Sbjct: 1 MNKLRQSFRRKKDVYVPEASRPHQWQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICED 60
Query: 61 AVKRLKA-----------TGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPD 109
AVKRLKA TGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPD
Sbjct: 61 AVKRLKAERKFFKGFFGKTGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPD 120
Query: 110 RNFDRAFSYICRDGTTRRWICHCFMAVKDTGERLSHAVGCAFAACLERKQKREKECGVTA 169
RNFDRAFSYICRDGTTRRWICHCFMAVKDTGERLSHAVGCAFAACLERKQKREKECGVTA
Sbjct: 121 RNFDRAFSYICRDGTTRRWICHCFMAVKDTGERLSHAVGCAFAACLERKQKREKECGVTA 180
Query: 170 TFDASRTTFTREGSFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAPSPS 229
TFDASRTTFTREGSFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAPSPS
Sbjct: 181 TFDASRTTFTREGSFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAPSPS 240
Query: 230 SPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLRINE 289
SPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLRINE
Sbjct: 241 SPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLRINE 300
Query: 290 LPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQ 349
LPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQ
Sbjct: 301 LPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQ 360
Query: 350 SPTFQGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQ 409
SPTFQGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQ
Sbjct: 361 SPTFQGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQ 420
Query: 410 PPPPTAISQPASPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVG 469
PPPPTAISQPASPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVG
Sbjct: 421 PPPPTAISQPASPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVG 480
Query: 470 ITPSQMVANVFGTAGHPQAAHPHQSPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAA 529
ITPSQMVANVFGTAGHPQAAHPHQSPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAA
Sbjct: 481 ITPSQMVANVFGTAGHPQAAHPHQSPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAA 540
Query: 530 FNGVDDGRLASADRHTEVPTGTCPVDPFEAQWAALENKSKQRTNPSPTNPFSSDLQKTFE 589
FNGVDDGRLASADRHTEVPTGTCPVDPFEAQWAALENKSKQRTNPSPTNPFSSDLQKTFE
Sbjct: 541 FNGVDDGRLASADRHTEVPTGTCPVDPFEAQWAALENKSKQRTNPSPTNPFSSDLQKTFE 600
Query: 590 IEL 592
IEL
Sbjct: 601 IEL 603
>gi|20070356 numb homolog isoform 3 [Homo sapiens]
Length = 640
Score = 1179 bits (3050), Expect = 0.0
Identities = 592/640 (92%), Positives = 592/640 (92%), Gaps = 48/640 (7%)
Query: 1 MNKLRQSFRRKKDVYVPEASRPHQWQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICED 60
MNKLRQSFRRKKDVYVPEASRPHQWQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICED
Sbjct: 1 MNKLRQSFRRKKDVYVPEASRPHQWQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICED 60
Query: 61 AVKRLKATGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYIC 120
AVKRLKATGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYIC
Sbjct: 61 AVKRLKATGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYIC 120
Query: 121 RDGTTRRWICHCFMAVKDTGERLSHAVGCAFAACLERKQKREKECGVTATFDASRTTFTR 180
RDGTTRRWICHCFMAVKDTGERLSHAVGCAFAACLERKQKREKECGVTATFDASRTTFTR
Sbjct: 121 RDGTTRRWICHCFMAVKDTGERLSHAVGCAFAACLERKQKREKECGVTATFDASRTTFTR 180
Query: 181 EGSFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAPSPSSPTSPTSDATT 240
EGSFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAPSPSSPTSPTSDATT
Sbjct: 181 EGSFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAPSPSSPTSPTSDATT 240
Query: 241 SLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLRINELPSTMQRKTDF 300
SLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLRINELPSTMQRKTDF
Sbjct: 241 SLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLRINELPSTMQRKTDF 300
Query: 301 PIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQSPTFQ------ 354
PIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQSPTFQ
Sbjct: 301 PIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQSPTFQANGTDS 360
Query: 355 ------------------------------------------GTEWGQSSGAASPGLFQA 372
GTEWGQSSGAASPGLFQA
Sbjct: 361 AFHVLAKPAHTALAPVAMPVRETNPWAHAPDAANKEIAATCSGTEWGQSSGAASPGLFQA 420
Query: 373 GHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPASPFQGNAFLTSQ 432
GHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPASPFQGNAFLTSQ
Sbjct: 421 GHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPASPFQGNAFLTSQ 480
Query: 433 PVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVFGTAGHPQAAHPH 492
PVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVFGTAGHPQAAHPH
Sbjct: 481 PVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVFGTAGHPQAAHPH 540
Query: 493 QSPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAAFNGVDDGRLASADRHTEVPTGTC 552
QSPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAAFNGVDDGRLASADRHTEVPTGTC
Sbjct: 541 QSPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAAFNGVDDGRLASADRHTEVPTGTC 600
Query: 553 PVDPFEAQWAALENKSKQRTNPSPTNPFSSDLQKTFEIEL 592
PVDPFEAQWAALENKSKQRTNPSPTNPFSSDLQKTFEIEL
Sbjct: 601 PVDPFEAQWAALENKSKQRTNPSPTNPFSSDLQKTFEIEL 640
>gi|54144625 numb homolog isoform 1 [Homo sapiens]
Length = 651
Score = 1170 bits (3028), Expect = 0.0
Identities = 592/651 (90%), Positives = 592/651 (90%), Gaps = 59/651 (9%)
Query: 1 MNKLRQSFRRKKDVYVPEASRPHQWQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICED 60
MNKLRQSFRRKKDVYVPEASRPHQWQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICED
Sbjct: 1 MNKLRQSFRRKKDVYVPEASRPHQWQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICED 60
Query: 61 AVKRLKA-----------TGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPD 109
AVKRLKA TGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPD
Sbjct: 61 AVKRLKAERKFFKGFFGKTGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPD 120
Query: 110 RNFDRAFSYICRDGTTRRWICHCFMAVKDTGERLSHAVGCAFAACLERKQKREKECGVTA 169
RNFDRAFSYICRDGTTRRWICHCFMAVKDTGERLSHAVGCAFAACLERKQKREKECGVTA
Sbjct: 121 RNFDRAFSYICRDGTTRRWICHCFMAVKDTGERLSHAVGCAFAACLERKQKREKECGVTA 180
Query: 170 TFDASRTTFTREGSFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAPSPS 229
TFDASRTTFTREGSFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAPSPS
Sbjct: 181 TFDASRTTFTREGSFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAPSPS 240
Query: 230 SPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLRINE 289
SPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLRINE
Sbjct: 241 SPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLRINE 300
Query: 290 LPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQ 349
LPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQ
Sbjct: 301 LPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQ 360
Query: 350 SPTFQ------------------------------------------------GTEWGQS 361
SPTFQ GTEWGQS
Sbjct: 361 SPTFQANGTDSAFHVLAKPAHTALAPVAMPVRETNPWAHAPDAANKEIAATCSGTEWGQS 420
Query: 362 SGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPAS 421
SGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPAS
Sbjct: 421 SGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPAS 480
Query: 422 PFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVFG 481
PFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVFG
Sbjct: 481 PFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVFG 540
Query: 482 TAGHPQAAHPHQSPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAAFNGVDDGRLASA 541
TAGHPQAAHPHQSPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAAFNGVDDGRLASA
Sbjct: 541 TAGHPQAAHPHQSPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAAFNGVDDGRLASA 600
Query: 542 DRHTEVPTGTCPVDPFEAQWAALENKSKQRTNPSPTNPFSSDLQKTFEIEL 592
DRHTEVPTGTCPVDPFEAQWAALENKSKQRTNPSPTNPFSSDLQKTFEIEL
Sbjct: 601 DRHTEVPTGTCPVDPFEAQWAALENKSKQRTNPSPTNPFSSDLQKTFEIEL 651
>gi|10863899 numb homolog (Drosophila)-like [Homo sapiens]
Length = 609
Score = 597 bits (1539), Expect = e-170
Identities = 348/625 (55%), Positives = 402/625 (64%), Gaps = 90/625 (14%)
Query: 1 MNKLRQSFRRKKDVYVPEASRPHQWQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICED 60
MNKLRQS RR+K YVPEASRPHQWQ DE+ VR G CSFPV+YLGHVEV+ESRGMH+CED
Sbjct: 42 MNKLRQSLRRRKPAYVPEASRPHQWQADEDAVRKGTCSFPVRYLGHVEVEESRGMHVCED 101
Query: 61 AVKRLKATGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYIC 120
AVK+LKA G+K+VK+VLWVSADGLRVVD+KTKDL+VDQTIEKVSFCAPDRN D+AFSYIC
Sbjct: 102 AVKKLKAMGRKSVKSVLWVSADGLRVVDDKTKDLLVDQTIEKVSFCAPDRNLDKAFSYIC 161
Query: 121 RDGTTRRWICHCFMAVKDTGERLSHAVGCAFAACLERKQKREKECGVTATFDASRTTFTR 180
RDGTTRRWICHCF+A+KD+GERLSHAVGCAFAACLERKQ+REKECGVTA FDASRT+F R
Sbjct: 162 RDGTTRRWICHCFLALKDSGERLSHAVGCAFAACLERKQRREKECGVTAAFDASRTSFAR 221
Query: 181 EGSFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAPSPSSPTSPTSDATT 240
EGSFR++ AERE D KKAE +VAPG P SPT T+
Sbjct: 222 EGSFRLSGGGRPAERE-----APDKKKAEA---AAAPTVAPGPAQPGHVSPTPATTSPGE 273
Query: 241 SLEMNNP-------HAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLRINELPST 293
E P AIPRRHAP+EQL RQGSFRGFPALSQK SPFKRQLSLR+NELPST
Sbjct: 274 KGEAGTPVAAGTTAAAIPRRHAPLEQLVRQGSFRGFPALSQKNSPFKRQLSLRLNELPST 333
Query: 294 MQRKTDFPIKNAVPEVE----GEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQ 349
+QR+TDF +K VPE+E G+++SI++LC+QI+++F++ P P
Sbjct: 334 LQRRTDFQVKGTVPEMEPPGAGDSDSINALCTQISSSFASAGAPAPGPP----------- 382
Query: 350 SPTFQGTE-WGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQ---------- 398
P GT WG+ S FQ GH+RTPSEA+RWLEEVS+ +AQQ Q
Sbjct: 383 -PATTGTSAWGEPS-VPPAAAFQPGHKRTPSEAERWLEEVSQVAKAQQQQQQQQQQQQQQ 440
Query: 399 -------ASAAP---LQPVLQPPPPTAISQPASPFQGNAFLTSQPVPVGVVPALQPAFVP 448
AS AP + P LQP P A+P Q FL P +QP FVP
Sbjct: 441 QQQQQQAASVAPVPTMPPALQPFPAPVGPFDAAPAQVAVFLPP--------PHMQPPFVP 492
Query: 449 AQSYPVANGMPY-PAPNVPVVGITPSQMVANVFGTAGHPQAAHPHQSPSLVRQQTFPHYE 507
A YP G+ Y P P VPVVGITPSQMVAN F +A Q P + L + FP
Sbjct: 493 A--YP---GLGYPPMPRVPVVGITPSQMVANAFCSAAQLQ---PQPATLLGKAGAFPPPA 544
Query: 508 ASSATTSPFFKPPAQHLNGSAAFNGVDDGRLASADRHTEVPTGTCPVDPFEAQWAALENK 567
SA S P NG+ P +DPFEAQWAALE K
Sbjct: 545 IPSAPGSQARPRP----NGAPW-------------PPEPAPAPAPELDPFEAQWAALEGK 587
Query: 568 SKQRTNPSPTNPFSSDLQKTFEIEL 592
+ T P+NPFS DLQKTFEIEL
Sbjct: 588 A---TVEKPSNPFSGDLQKTFEIEL 609
>gi|7705318 GULP, engulfment adaptor PTB domain containing 1 [Homo
sapiens]
Length = 304
Score = 81.6 bits (200), Expect = 2e-15
Identities = 61/260 (23%), Positives = 124/260 (47%), Gaps = 34/260 (13%)
Query: 4 LRQSFRRKKDVYVPEASRPHQWQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICEDAVK 63
+ ++F RKKD W E + + K+LG EV++ +G + DAV+
Sbjct: 1 MNRAFSRKKD---------KTWMHTPEALSKHFIPYNAKFLGSTEVEQPKGTEVVRDAVR 51
Query: 64 RLK-------ATGKKAVKAVLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAF 116
+LK + G+K K L +S G+++++ KTK++ + + ++SFCA D+ R F
Sbjct: 52 KLKFARHIKKSEGQKIPKVELQISIYGVKILEPKTKEVQHNCQLHRISFCADDKTDKRIF 111
Query: 117 SYICRDGTTRRWICHCFMAVKDTGERLSHAVGCAFAACLERKQKREKECGVTATFDASRT 176
++IC+D + + +C+ F + K E ++ +G AF + ++ E G +
Sbjct: 112 TFICKDSESNKHLCYVFDSEK-CAEEITLTIGQAF----DLAYRKFLESG-------GKD 159
Query: 177 TFTREGSFRVTTATEQAERE--EIMKQMQDAKKAETDKIVVGSSVAPGNTAPSPSSPTSP 234
TR+ + + E E E+ ++QD + +++ + AP + +P SP++
Sbjct: 160 VETRKQIAGLQKRIQDLETENMELKNKVQDLE----NQLRITQVSAPPAGSMTPKSPSTD 215
Query: 235 TSDATTSLEMNNPHAIPRRH 254
D +++ ++P R+
Sbjct: 216 IFDMIPFSPISHQSSMPTRN 235
>gi|132626790 low density lipoprotein receptor adaptor protein 1
[Homo sapiens]
Length = 308
Score = 77.4 bits (189), Expect = 3e-14
Identities = 63/236 (26%), Positives = 103/236 (43%), Gaps = 32/236 (13%)
Query: 22 PHQWQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICEDAVKRL----KATGKKAVKAVL 77
P W E + G F +KYLG V++ +G + A+KR+ KA+GKK K L
Sbjct: 32 PENWTDTRETLLEGML-FSLKYLGMTLVEQPKGEELSAAAIKRIVATAKASGKKLQKVTL 90
Query: 78 WVSADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYICRDGTTRRWICHCFMAVK 137
VS G+ + D T LI + +I ++S+C D+ D+ F+YI + + CH F+ K
Sbjct: 91 KVSPRGIILTDNLTNQLIENVSIYRISYCTADKMHDKVFAYIAQSQHNQSLECHAFLCTK 150
Query: 138 -DTGERLSHAVGCAFAACLE--RKQKREKECGVTATFDASRTTFTREGSFRVTTATEQAE 194
+ ++ V AF E + K EKE R ++EG
Sbjct: 151 RKMAQAVTLTVAQAFKVAFEFWQVSKEEKE---------KRDKASQEGG----------- 190
Query: 195 REEIMKQMQDAKKAETDKIVVGSSVAPGNTAPSPSSPTSPTSDATTSLEMNNPHAI 250
+++ QD + + G+ + TA +P S S ++ T E+ P A+
Sbjct: 191 --DVLGARQDCTPSLKSLVATGNLLDLEETAKAPLSTVS--ANTTNMDEVPRPQAL 242
>gi|33350928 disabled homolog 1 [Homo sapiens]
Length = 555
Score = 65.1 bits (157), Expect = 2e-10
Identities = 115/542 (21%), Positives = 198/542 (36%), Gaps = 85/542 (15%)
Query: 30 EGVRTGKCSFPVKYLGHVEVDESRGMHICEDAVKRLKAT-------GKKAVKAVLWVSAD 82
EGVR + K +G EV +RG +C+D++ +LK G+ K L +S
Sbjct: 38 EGVR-----YKAKLIGIDEVSAARGDKLCQDSMMKLKGVVAGARSKGEHKQKIFLTISFG 92
Query: 83 GLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYIC-RDGTTRRWICHCFMAVK---- 137
G+++ DEKT L + ++S+ A D RAF Y+C ++G H F+A+K
Sbjct: 93 GIKIFDEKTGALQHHHAVHEISYIAKDITDHRAFGYVCGKEGN------HRFVAIKTAQA 146
Query: 138 ------DTGERLSHAVGCAFAACLERKQKREKECGVTA-----------------TFDAS 174
D + LE+K +++K+C F+A
Sbjct: 147 AEPVILDLRDLFQLIYELKQREELEKKAQKDKQCEQAVYQTILEEDVEDPVYQYIVFEAG 206
Query: 175 ----RTTFTREGSFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAPSPSS 230
R T E ++V T+ ++ ++ K + + + S+ + P+P++
Sbjct: 207 HEPIRDPETEENIYQVPTSQKKEGVYDVPKSQPVSAVTQLELFGDMSTPPDITSPPTPAT 266
Query: 231 PTS---PTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLRI 287
P P+S T + ++P A + G+ A+ + F Q L
Sbjct: 267 PGDAFIPSSSQTLPASADVFSSVPFGTAAVPS--------GYVAMGAVLPSFWGQQPLVQ 318
Query: 288 NELPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVA 347
++ Q P+ +P + A L + T F A TV+
Sbjct: 319 QQMVMGAQP----PVAQVMPGAQPIAWGQPGLFPATQQPWPTVAGQFPPAAFMPTQTVMP 374
Query: 348 PQSPTFQGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPV 407
+ FQG + A PG + R+ + D+ +++ K A P+ P
Sbjct: 375 LPAAMFQGP---LTPLATVPGTSDS--TRSSPQTDKPRQKMGKETFKDFQMAQPPPV-PS 428
Query: 408 LQPPPP--TAISQPASPFQGNAFLTSQPVPVGVVPALQPAFVPAQSY-PVANGMPYPAPN 464
+P P T S+ S + + Q P S P N P PAP
Sbjct: 429 RKPDQPSLTCTSEAFSSYFNKVGVAQDTDDCDDFDISQLNLTPVTSTTPSTNSPPTPAPR 488
Query: 465 VPVVGITPSQMVANVFGTAGHPQA----AHPHQSPSLVRQQTFPHYEASSATTSPFFKPP 520
+PS+ A+ A P +SPS +Q P +S+ + PF +P
Sbjct: 489 QS----SPSKSSAS---HASDPTTDDIFEEGFESPSKSEEQEAPDGSQASSNSDPFGEPS 541
Query: 521 AQ 522
+
Sbjct: 542 GE 543
>gi|50511947 cajalin 2 isoform b [Homo sapiens]
Length = 510
Score = 58.9 bits (141), Expect = 1e-08
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 8/125 (6%)
Query: 19 ASRPHQ-WQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICEDAVKRLKATGKKAVKA-- 75
AS P Q WQ E + C + YLG + + E RG +DA +++A +K+ +
Sbjct: 291 ASTPVQYWQHHPEKLIFQSCDYKAFYLGSMLIKELRGTESTQDACAKMRANCQKSTEQMK 350
Query: 76 -----VLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYICRDGTTRRWIC 130
+L VS G++ +D K++I + I +S A D F+YI +D + C
Sbjct: 351 KVPTIILSVSYKGVKFIDATNKNIIAEHEIRNISCAAQDPEDLSTFAYITKDLKSNHHYC 410
Query: 131 HCFMA 135
H F A
Sbjct: 411 HVFTA 415
>gi|50511945 cajalin 2 isoform a [Homo sapiens]
Length = 1248
Score = 58.9 bits (141), Expect = 1e-08
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 8/125 (6%)
Query: 19 ASRPHQ-WQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICEDAVKRLKATGKKAVKA-- 75
AS P Q WQ E + C + YLG + + E RG +DA +++A +K+ +
Sbjct: 1041 ASTPVQYWQHHPEKLIFQSCDYKAFYLGSMLIKELRGTESTQDACAKMRANCQKSTEQMK 1100
Query: 76 -----VLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYICRDGTTRRWIC 130
+L VS G++ +D K++I + I +S A D F+YI +D + C
Sbjct: 1101 KVPTIILSVSYKGVKFIDATNKNIIAEHEIRNISCAAQDPEDLSTFAYITKDLKSNHHYC 1160
Query: 131 HCFMA 135
H F A
Sbjct: 1161 HVFTA 1165
>gi|10047134 cajalin 2 isoform c [Homo sapiens]
Length = 414
Score = 58.9 bits (141), Expect = 1e-08
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 8/125 (6%)
Query: 19 ASRPHQ-WQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICEDAVKRLKATGKKAVKA-- 75
AS P Q WQ E + C + YLG + + E RG +DA +++A +K+ +
Sbjct: 207 ASTPVQYWQHHPEKLIFQSCDYKAFYLGSMLIKELRGTESTQDACAKMRANCQKSTEQMK 266
Query: 76 -----VLWVSADGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYICRDGTTRRWIC 130
+L VS G++ +D K++I + I +S A D F+YI +D + C
Sbjct: 267 KVPTIILSVSYKGVKFIDATNKNIIAEHEIRNISCAAQDPEDLSTFAYITKDLKSNHHYC 326
Query: 131 HCFMA 135
H F A
Sbjct: 327 HVFTA 331
>gi|140161500 ankyrin repeat and sterile alpha motif domain containing
1 [Homo sapiens]
Length = 1134
Score = 56.2 bits (134), Expect = 8e-08
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Query: 25 WQTDEEGVRTGKCSFPVKYLGHVEVDESRGMHICEDAVKRLKATG---KKAVKAVLWVSA 81
WQ E + C + YLG + + + RG +DA +++ + KK +L ++
Sbjct: 928 WQHQPEKLIFESCGYEANYLGSMLIKDLRGTESTQDACAKMRKSTEHMKKIPTIILSITY 987
Query: 82 DGLRVVDEKTKDLIVDQTIEKVSFCAPDRNFDRAFSYICRDGTTRRWICHCFMAV 136
G++ +D K++I + I +S A D F+YI +D T CH F V
Sbjct: 988 KGVKFIDASNKNVIAEHEIRNISCAAQDPEDLCTFAYITKDLQTSHHYCHVFSTV 1042
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 53.1 bits (126), Expect = 7e-07
Identities = 81/356 (22%), Positives = 128/356 (35%), Gaps = 40/356 (11%)
Query: 189 ATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAPSPSSPTSPTSDATTS-LEMNNP 247
A Q ++ + K+ +D K+ + +K V + + P T +S ++
Sbjct: 527 ALSQPQQNKPKKKEKDKKEKKKEKHKRKEEVEENKKSKAKEPPPKKTKKNNSSNSNVSKK 586
Query: 248 HAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSLRINELPST-------MQRKTDF 300
P + P + + P ++ KRQLSL IN+LP + + +
Sbjct: 587 EPAPMKSKPPPTYESEEEDKCKPMSYEE----KRQLSLDINKLPGEKLGRVVHIIQSREP 642
Query: 301 PIKNAVP-EVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQSPT--FQGTE 357
+KN+ P E+E + E++ + + T P + V V+A S F +E
Sbjct: 643 SLKNSNPDEIEIDFETLKPSTLRELERYVTSCLRKKRKPQAEKVDVIAGSSKMKGFSSSE 702
Query: 358 WGQSSGAASPGLFQAGHRRTPSEADRWL--EEVSKSVRAQQPQASAAPLQPVLQPPPPTA 415
SS ++S + P + E K Q AP QPPPP
Sbjct: 703 SESSSESSSSDSEDSETEMAPKSKKKGHPGREQKKHHHHHHQQMQQAPAPVPQQPPPPPQ 762
Query: 416 ISQPASPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQM 475
P P Q QP P P++ PA ++ P+ A VPV+ Q+
Sbjct: 763 QPPPPPPPQQQ----QQPPPPPPPPSMPQQAAPAMK---SSPPPFIATQVPVL---EPQL 812
Query: 476 VANVFGTAGH--------PQAAHPHQSPSLVRQQTFPHYEASSATTSPFFKPPAQH 523
+VF GH PQ P P T PH + + PPA H
Sbjct: 813 PGSVFDPIGHFTQPILHLPQPELPPHLPQPPEHSTPPHLNQHAVVS-----PPALH 863
Score = 31.6 bits (70), Expect = 2.1
Identities = 39/155 (25%), Positives = 50/155 (32%), Gaps = 39/155 (25%)
Query: 359 GQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPP------ 412
G+ G G + G P+ + S + Q PQ + P+Q P P
Sbjct: 178 GRGRGRKETGTAKPGVSTVPNTT-----QASTPPQTQTPQPNPPPVQATPHPFPAVTPDL 232
Query: 413 ----PTAISQPASPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVV 468
P P P Q T PVP P PA P QS+P P++
Sbjct: 233 IVQTPVMTVVPPQPLQ-----TPPPVPPQPQPPPAPAPQPVQSHP------------PII 275
Query: 469 GITPSQMVANVFGTAGHPQAAHP------HQSPSL 497
TP Q V G P H+ PSL
Sbjct: 276 AATP-QPVKTKKGVKRKADTTTPTTIDPIHEPPSL 309
Score = 30.8 bits (68), Expect = 3.7
Identities = 54/236 (22%), Positives = 78/236 (33%), Gaps = 27/236 (11%)
Query: 226 PSPSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFKRQLSL 285
P P P P L+ P P + P Q Q R P Q M Q S
Sbjct: 954 PPPPLPPPPHPSVQQQLQQQPPPPPPPQPQPPPQQQHQPPPR--PVHLQPM-----QFST 1006
Query: 286 RINELPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPE----DPFSSAPMTK 341
I + P ++ P P A+ Q+ +P DP+S+ + +
Sbjct: 1007 HIQQPPPPQGQQPPHPPPGQQPPPPQPAKP-----QQVIQHHHSPRHHKSDPYSTGHLRE 1061
Query: 342 ---PVTVVAPQSPTFQG-TEWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQP 397
P+ + +PQ FQ T P + R S V K + P
Sbjct: 1062 APSPLMIHSPQMSQFQSLTHQSPPQQNVQP---KKQELRAASVVQPQPLVVVKEEKIHSP 1118
Query: 398 QASAAPLQPVLQPPPPTAISQPASPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYP 453
+ P P L+P PP +P +PV VG P ++P P Q+ P
Sbjct: 1119 IIRSEPFSPSLRPEPPKHPESIKAPVHLPQRPEMKPVDVG-RPVIRP---PEQNAP 1170
>gi|31317301 nitric oxide synthase 1 (neuronal) adaptor protein
isoform 1 [Homo sapiens]
Length = 506
Score = 51.2 bits (121), Expect = 3e-06
Identities = 63/262 (24%), Positives = 109/262 (41%), Gaps = 43/262 (16%)
Query: 28 DEEGVRTGKCSFPVKYLGHVEVDESRGMHICEDAVKRL----KATGKKAVKAVLWVSADG 83
+E+ + G C F KY+G ++V A++R+ KA K K + VS DG
Sbjct: 22 NEDAFQHGIC-FEAKYVGSLDVPRPNSRVEIVAAMRRIRYEFKAKNIKKKKVSIMVSVDG 80
Query: 84 LRVVDEKTKDLIVDQTIE----------------KVSFCAPDRNFDRAFSYICRDGTTRR 127
++V+ +K K L++ Q E ++ + + D + FSYI RDG +
Sbjct: 81 VKVILKKKKKLLLLQKKEWTWDESKMLVMQDPIYRIFYVSHDSQDLKIFSYIARDGASNI 140
Query: 128 WICHCFMAVKDT-GERLSHAVGCAFAAC----LERKQKR-------EKECGVTATFDASR 175
+ C+ F + K + R+ VG AF C L+ Q+ E E ++ D R
Sbjct: 141 FRCNVFKSKKKSQAMRIVRTVGQAFEVCHKLSLQHTQQNADGQEDGESERNSNSSGDPGR 200
Query: 176 TTFTREGSFRVTTAT-EQAEREEIM-----KQMQDAKKAETDKIVVGSSVAPGNTAPSPS 229
G+ R +TAT E+ + + + + + + TD VG +T S
Sbjct: 201 QL---TGAERASTATAEETDIDAVEVPLPGNDVLEFSRGVTDLDAVGKE-GGSHTGSKVS 256
Query: 230 SPTSPTSDATTSLEMNNPHAIP 251
P P A+ + + + + P
Sbjct: 257 HPQEPMLTASPRMLLPSSSSKP 278
>gi|148491082 disabled homolog 2 [Homo sapiens]
Length = 770
Score = 50.8 bits (120), Expect = 3e-06
Identities = 114/513 (22%), Positives = 192/513 (37%), Gaps = 107/513 (20%)
Query: 39 FPVKYLGHVEVDESRGMHICEDAVKRLK---ATGKKAV--KAVLWV--SADGLRVVDEKT 91
+ K +G +V ++RG + +D++ +LK A G+ K +WV S G++++DEKT
Sbjct: 50 YKAKLIGIDDVPDARGDKMSQDSMMKLKGMAAAGRSQGQHKQRIWVNISLSGIKIIDEKT 109
Query: 92 KDLIVDQTIEKVSFCAPDRNFDRAFSYIC-RDGTTRRWICHCFMAVKDTGERLSHAV--- 147
+ + + K+SF A D +RAF Y+C +G H F A+K TG++ V
Sbjct: 110 GVIEHEHPVNKISFIARDVTDNRAFGYVCGGEGQ------HQFFAIK-TGQQAEPLVVDL 162
Query: 148 GCAFAACLERKQKREKECGVTATFDASRTTFTREGSFRVTTATEQAEREEIMKQMQDAKK 207
F K+K E++ + E S V +E I+ + K
Sbjct: 163 KDLFQVIYNVKKKEEEKKKI------------EEASKAVENGSEAL---MILDDQTNKLK 207
Query: 208 AETDKIVVGSSVAPGNTAPSPSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFR 267
+ D++ + + +T P +SPT S +++N+ E Q S R
Sbjct: 208 SGVDQMDLFGDM---STPPDLNSPTE--SKDILLVDLNS-----------EIDTNQNSLR 251
Query: 268 GFPALSQKMSPFKRQLSLRINELPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAF 327
P L+ ++ ++ R T P + +PE + S N F
Sbjct: 252 ENPFLTNGIT-------------SCSLPRPT--PQASFLPE---------NAFSANLNFF 287
Query: 328 STPE-DPFSSAPMTKPVTVVAPQSPTFQGTEWGQSSGAASPGLFQAGHRRTPSEAD---- 382
TP DPF P T+P + + + + + ++S G P D
Sbjct: 288 PTPNPDPFRDDPFTQPDQSTPSSFDSLKSPDQKKENSSSSSTPLSNG----PLNGDVDYF 343
Query: 383 -RWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPASPFQGNAF-LTSQPVP-VGVV 439
+ +++S Q+ QA P Q P S + N F + S P P VG
Sbjct: 344 GQQFDQISNRTGKQEAQAGPWPFSS-SQTQPAVRTQNGVSEREQNGFSVKSSPNPFVG-- 400
Query: 440 PALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVFGTAGHPQAAHPHQSPSLVR 499
P + + NG+ + V +P +A + P QS R
Sbjct: 401 -------SPPKGLSIQNGVKQDLES--SVQSSPHDSIAII----------PPPQSTKPGR 441
Query: 500 QQTFPHYEASSATTSPFFKPPAQHLNGSAAFNG 532
+ A+ S F PP +G A+ G
Sbjct: 442 GRRTAKSSANDLLASDIFAPPVSEPSGQASPTG 474
>gi|21327715 transcription elongation regulator 1 isoform 1 [Homo
sapiens]
Length = 1098
Score = 50.1 bits (118), Expect = 6e-06
Identities = 45/178 (25%), Positives = 71/178 (39%), Gaps = 13/178 (7%)
Query: 305 AVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQSPTFQGTEWGQSSGA 364
A + + +A+ + + +Q+ P +S+P T + +P+ + ++
Sbjct: 233 AQAQAQAQAQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTATSV 292
Query: 365 ASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPASPFQ 424
A +TPS A + + +V P +A P+Q V QP P T PA P
Sbjct: 293 AQTVSTPTTQDQTPSSA---VSVATPTVSVSTPAPTATPVQTVPQPHPQTL--PPAVPH- 346
Query: 425 GNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVFGT 482
S P P +PA P VP P+ GMP P P V ++ I V V T
Sbjct: 347 ------SVPQPTTAIPAFPPVMVPPFRVPLP-GMPIPLPGVAMMQIVSCPYVKTVATT 397
Score = 32.3 bits (72), Expect = 1.3
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 17/91 (18%)
Query: 394 AQQPQASAAPLQPVLQPPPPTAISQ-----PASPFQGNAF---LTSQPVPVGVVPALQPA 445
A P A P+++PPPP + + P PF F + P P G+ P + P
Sbjct: 33 APPPNAVMRGPPPLMRPPPPFGMMRGPPPPPRPPFGRPPFDPNMPPMPPPGGIPPPMGPP 92
Query: 446 FV--------PAQSYPVANGMPYPAPNVPVV 468
+ P S P GM +P P +P V
Sbjct: 93 HLQRPPFMPPPMSSMPPPPGMMFP-PGMPPV 122
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 48.9 bits (115), Expect = 1e-05
Identities = 67/299 (22%), Positives = 110/299 (36%), Gaps = 32/299 (10%)
Query: 220 APGNTAPSPSSPTSPTSDATTSLEMNNPHA-IPRRHAPIEQLARQGSFRGFPALSQKMSP 278
+P P+P PTSP + T E +P A +P P A + PA P
Sbjct: 1093 SPAAAVPTPEEPTSPAAAVPTPEEPASPAAAVPTPEEPASPAAAVPTPEE-PAFPAPAVP 1151
Query: 279 FKRQLSLRINELPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAP 338
+ + +P+ P ++A P + S+ + + P P +S P
Sbjct: 1152 TPEESASAAVAVPT--------PEESASPAAAVPTPAESASFAAVVATLEEPTSPAASVP 1203
Query: 339 MTKPVTVVAP----QSPTFQGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRA 394
P +VA SP + + + + +P+ A LEE + S A
Sbjct: 1204 T--PAAMVATLEEFTSPA-ASVPTSEEPASLAAAVSNPEEPTSPAAAVPTLEEPTSSAAA 1260
Query: 395 Q-QPQASAAPLQPVLQPPPPTAISQPASPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYP 453
P+ ++P V P +PASP + L P VP + A +PA S P
Sbjct: 1261 VLTPEELSSPAASVPTP------EEPASPAAAVSNLEEPASPAAAVPTPEVAAIPAASVP 1314
Query: 454 VANGMPYPAPNVPVVGITPSQMVANVFGTAGHPQAAHPHQSPSLVRQQTFPHYEASSAT 512
P +P + P + V+ + G +AH P + ++ P E +S+T
Sbjct: 1315 TPE-----VPAIPAAAVPPMEEVSPI-GVPFLGVSAHTDSVP--ISEEGTPVLEEASST 1365
Score = 46.6 bits (109), Expect = 6e-05
Identities = 62/267 (23%), Positives = 89/267 (33%), Gaps = 24/267 (8%)
Query: 329 TPEDPFSSAPMTKPVTVVAPQSPTFQGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEEV 388
T ED P+T TV AP+ P ASP A TP E
Sbjct: 965 TEEDGTPEGPVTPATTVHAPEEPDTAAVRVSTPEEPASP----AAAVPTPEEP---TSPA 1017
Query: 389 SKSVRAQQPQASAAPLQPVLQPPPPTAI----SQPASPFQGNAFLTSQPVPVGVVPALQP 444
+ ++P + AA + P +P P A +P SP P VP +
Sbjct: 1018 AAVPTPEEPTSPAAAVPPPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEE 1077
Query: 445 AFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVFGTAGHPQAAHPHQSPSLVRQQTFP 504
PA + P PA VP TP + + A P P + V P
Sbjct: 1078 PTSPAAAVPTPEEPTSPAAAVP----TPEEPTS---PAAAVPTPEEPASPAAAVPTPEEP 1130
Query: 505 HYEASSATT--SPFFKPPAQHLNGSAAFNGVDDGRLASADRHTEVPTGTCPVDPFEAQWA 562
A++ T P F PA +A V + P P A +A
Sbjct: 1131 ASPAAAVPTPEEPAFPAPAVPTPEESASAAV----AVPTPEESASPAAAVPTPAESASFA 1186
Query: 563 ALENKSKQRTNPSPTNPFSSDLQKTFE 589
A+ ++ T+P+ + P + + T E
Sbjct: 1187 AVVATLEEPTSPAASVPTPAAMVATLE 1213
Score = 41.6 bits (96), Expect = 0.002
Identities = 86/360 (23%), Positives = 118/360 (32%), Gaps = 61/360 (16%)
Query: 220 APGNTAPSPSSPTSPTSDATTSLEMNNP-HAIPRRHAPIEQLARQGSFRGFPALSQKMSP 278
+P P+P PTSP + T E +P A+P P A A+ P
Sbjct: 1002 SPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPPPEEPTSPAA---------AVPTPEEP 1052
Query: 279 FKRQLSLRINELPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAP 338
++ E P++ P + P A TPE+P S A
Sbjct: 1053 TSPAAAVPTPEEPTSPAAAVPTPEEPTSPAA----------------AVPTPEEPTSPA- 1095
Query: 339 MTKPVTVVAPQSPTFQGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQ 398
V P+ PT ASP A TP E S + P+
Sbjct: 1096 ----AAVPTPEEPTSPAAAVPTPEEPASP----AAAVPTPE------EPASPAAAVPTPE 1141
Query: 399 ASAAPLQPVLQPPPPTAISQPASPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGM 458
A P P + P +A + A P + + VP A A V P +
Sbjct: 1142 EPAFP-APAVPTPEESASAAVAVPTPEESASPAAAVPTPAESASFAAVVATLEEPTS--- 1197
Query: 459 PYPAPNVPVVGITPSQMVANVFGTAGHPQAAHP--HQSPSLVRQQTFPHYEASSATTSPF 516
PA +VP TP+ MVA + P A+ P + SL + P S A P
Sbjct: 1198 --PAASVP----TPAAMVATLEEFTS-PAASVPTSEEPASLAAAVSNPEEPTSPAAAVPT 1250
Query: 517 FKPPAQHLNGSAAFNGVDDGRLASADRHTEVPTGTCPVDPFEAQWAALENKSKQRTNPSP 576
+ P S+A + L+S VPT P P A E S P+P
Sbjct: 1251 LEEPT-----SSAAAVLTPEELSSP--AASVPTPEEPASPAAAVSNLEEPASPAAAVPTP 1303
>gi|91208418 transcription elongation regulator 1 isoform 2 [Homo
sapiens]
Length = 1077
Score = 47.8 bits (112), Expect = 3e-05
Identities = 43/168 (25%), Positives = 69/168 (41%), Gaps = 14/168 (8%)
Query: 305 AVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPVTVVAPQSPTFQGTEWGQSSGA 364
A + + +A+ + + +Q+ P +S+P T + +P+ + ++
Sbjct: 233 AQAQAQAQAQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTATSV 292
Query: 365 ASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPASPFQ 424
A +TPS A + + +V P +A P+Q V QP P T PA P
Sbjct: 293 AQTVSTPTTQDQTPSSA---VSVATPTVSVSTPAPTATPVQTVPQPHPQTL--PPAVPH- 346
Query: 425 GNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITP 472
S P P +PA P VP P+ GMP P P V + G+ P
Sbjct: 347 ------SVPQPTTAIPAFPPVMVPPFRVPLP-GMPIPLPGV-LPGMAP 386
Score = 32.3 bits (72), Expect = 1.3
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 17/91 (18%)
Query: 394 AQQPQASAAPLQPVLQPPPPTAISQ-----PASPFQGNAF---LTSQPVPVGVVPALQPA 445
A P A P+++PPPP + + P PF F + P P G+ P + P
Sbjct: 33 APPPNAVMRGPPPLMRPPPPFGMMRGPPPPPRPPFGRPPFDPNMPPMPPPGGIPPPMGPP 92
Query: 446 FV--------PAQSYPVANGMPYPAPNVPVV 468
+ P S P GM +P P +P V
Sbjct: 93 HLQRPPFMPPPMSSMPPPPGMMFP-PGMPPV 122
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 47.8 bits (112), Expect = 3e-05
Identities = 63/251 (25%), Positives = 88/251 (35%), Gaps = 24/251 (9%)
Query: 221 PGNTAPS-PSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPF 279
P + PS P+ P AT ++ P +E +G G P+ +++
Sbjct: 1310 PKSVPPSVPARGLQPQPPATPAVPHPPPSGAFGLGGALEAAESEGLGLGCPSPCKRLD-- 1367
Query: 280 KRQLSLRINELPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNA-FSTPEDPFSSAP 338
+L + LPS + D KN + ESISS S + + + P+D +S P
Sbjct: 1368 -EELKRNLETLPSFSSDEEDSVAKNRDLQ-----ESISSAISALDDPPLAGPKD--TSTP 1419
Query: 339 MTKPVTVVA--PQSPTFQGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQ 396
P+ A P P G S+G P L + TP A Q
Sbjct: 1420 DGPPLAPAAAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAP---------TPQPQ 1470
Query: 397 PQASAAPLQPVLQPPPPTAISQPASPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVAN 456
P P QP L PPP P+SP P P PA P + P
Sbjct: 1471 PPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEP 1530
Query: 457 GMPYPA-PNVP 466
P P P +P
Sbjct: 1531 AAPSPEDPELP 1541
Score = 33.5 bits (75), Expect = 0.56
Identities = 46/158 (29%), Positives = 61/158 (38%), Gaps = 21/158 (13%)
Query: 394 AQQPQASAAPLQPVLQPPPP-TAISQPASP--FQGNAF-LTSQPVPVGVVPALQ--PAFV 447
++ P S P QP PPPP A Q SP QG + + +P P G Q P
Sbjct: 470 SKAPSYSGGPPQPPSGPPPPGLATCQSYSPDQLQGQLYGVQGEPYP-GPAAHSQGLPTAS 528
Query: 448 PAQSYPVANGMPYPAPNVPVVGITPSQMVANVFGTAGHPQAAHPHQSPSL------VRQQ 501
P+ SY + PA + G PS + G A P QSP V
Sbjct: 529 PSLSYSTGHS---PALSGHGGGWGPSSLGGG--GEASPSHIIRPLQSPPATGRPPGVGSP 583
Query: 502 TFP-HYEASSATTSPFFKPP--AQHLNGSAAFNGVDDG 536
P Y +S ++PF PP + G+ + G DG
Sbjct: 584 GAPGKYLSSVLASAPFLAPPGAGSYAAGAGGYKGKGDG 621
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 47.0 bits (110), Expect = 5e-05
Identities = 90/426 (21%), Positives = 141/426 (33%), Gaps = 50/426 (11%)
Query: 168 TATFDASRTTFTREG-SFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAP 226
T+T +TT +E S T+A + A +++ + KAET ++ P T P
Sbjct: 162 TSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVLAK--PTPKAET------TTKGPALTTP 213
Query: 227 SPSSPTSPTSDATTSLEMNNPHAI------PRRHAPIE-QLARQGSFRGFPALSQKMSPF 279
+PT+P A+T+ + P I P+ AP + A P +++ +P
Sbjct: 214 KEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPT 273
Query: 280 --KRQLSLRINE-LPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSS 336
K E P+T + P + A + A + + T TP P
Sbjct: 274 TPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEP 333
Query: 337 APMTKPVTVVAPQSPTFQGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQ 396
AP TK P+ P + + P TP E + ++
Sbjct: 334 APTTKEPAPTTPKEPAPTAPKKPAPTTPKEPA------PTTPKEPAPTTTKEPSPTTPKE 387
Query: 397 PQASAAPLQPVL--QPPPPTAISQPASPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPV 454
P + P +P P T S P +P + + T +P P P + P
Sbjct: 388 PAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPT----------TPKEPAPT 437
Query: 455 ANGMPYPAPNVPVVGITPSQMVANVFGTAGHPQAAHPHQSPSLVRQQTFPHYEASSATTS 514
P P TP + T P P + ++T P T+
Sbjct: 438 TPKKPAPTTPKEPAPTTPKEPAPT---TTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTT 494
Query: 515 PFFKPPAQHLNGSAAFNGVDDGRLASADRHTEVPTGTCPVDPF-EAQWAALENKSKQRTN 573
P + L + A E PT T P +P AA N K+
Sbjct: 495 P------EKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKE--- 545
Query: 574 PSPTNP 579
P+PT P
Sbjct: 546 PAPTTP 551
Score = 36.2 bits (82), Expect = 0.087
Identities = 51/247 (20%), Positives = 81/247 (32%), Gaps = 32/247 (12%)
Query: 221 PGNTAPSPSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFK 280
P T P +PT+P A T+ P+ AP + PA + P
Sbjct: 546 PAPTTPKEPAPTTPKEPAPTT---------PKETAPTTPKGTAPTTLKEPAPTTPKKPAP 596
Query: 281 RQLSLRINELPSTMQRKTDFPIKNAVPEV-EGEAESISSLCSQITNAFSTPEDPFSSAPM 339
++L+ P+T + T P +G A + + T P P +AP
Sbjct: 597 KELA------PTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPT 650
Query: 340 T-KPVTVVAPQSPTFQGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQ 398
T K P+ P + + G S + P+ K P+
Sbjct: 651 TLKEPAPTTPKKPAPKELAPTTTKGPTS----TTSDKPAPTTPKETAPTTPKEPAPTTPK 706
Query: 399 ASAAPLQPVLQPPPPTAISQPA----------SPFQGNAFLTSQPVPVGVVPALQPAFVP 448
AP P PP + +S P SP + L+++P P + + + VP
Sbjct: 707 -KPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVP 765
Query: 449 AQSYPVA 455
P A
Sbjct: 766 TTKTPAA 772
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 47.0 bits (110), Expect = 5e-05
Identities = 90/426 (21%), Positives = 141/426 (33%), Gaps = 50/426 (11%)
Query: 168 TATFDASRTTFTREG-SFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAP 226
T+T +TT +E S T+A + A +++ + KAET ++ P T P
Sbjct: 203 TSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVLAK--PTPKAET------TTKGPALTTP 254
Query: 227 SPSSPTSPTSDATTSLEMNNPHAI------PRRHAPIE-QLARQGSFRGFPALSQKMSPF 279
+PT+P A+T+ + P I P+ AP + A P +++ +P
Sbjct: 255 KEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPT 314
Query: 280 --KRQLSLRINE-LPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSS 336
K E P+T + P + A + A + + T TP P
Sbjct: 315 TPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEP 374
Query: 337 APMTKPVTVVAPQSPTFQGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQ 396
AP TK P+ P + + P TP E + ++
Sbjct: 375 APTTKEPAPTTPKEPAPTAPKKPAPTTPKEPA------PTTPKEPAPTTTKEPSPTTPKE 428
Query: 397 PQASAAPLQPVL--QPPPPTAISQPASPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPV 454
P + P +P P T S P +P + + T +P P P + P
Sbjct: 429 PAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPT----------TPKEPAPT 478
Query: 455 ANGMPYPAPNVPVVGITPSQMVANVFGTAGHPQAAHPHQSPSLVRQQTFPHYEASSATTS 514
P P TP + T P P + ++T P T+
Sbjct: 479 TPKKPAPTTPKEPAPTTPKEPAPT---TTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTT 535
Query: 515 PFFKPPAQHLNGSAAFNGVDDGRLASADRHTEVPTGTCPVDPF-EAQWAALENKSKQRTN 573
P + L + A E PT T P +P AA N K+
Sbjct: 536 P------EKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKE--- 586
Query: 574 PSPTNP 579
P+PT P
Sbjct: 587 PAPTTP 592
Score = 36.2 bits (82), Expect = 0.087
Identities = 51/247 (20%), Positives = 81/247 (32%), Gaps = 32/247 (12%)
Query: 221 PGNTAPSPSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFK 280
P T P +PT+P A T+ P+ AP + PA + P
Sbjct: 587 PAPTTPKEPAPTTPKEPAPTT---------PKETAPTTPKGTAPTTLKEPAPTTPKKPAP 637
Query: 281 RQLSLRINELPSTMQRKTDFPIKNAVPEV-EGEAESISSLCSQITNAFSTPEDPFSSAPM 339
++L+ P+T + T P +G A + + T P P +AP
Sbjct: 638 KELA------PTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPT 691
Query: 340 T-KPVTVVAPQSPTFQGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQ 398
T K P+ P + + G S + P+ K P+
Sbjct: 692 TLKEPAPTTPKKPAPKELAPTTTKGPTS----TTSDKPAPTTPKETAPTTPKEPAPTTPK 747
Query: 399 ASAAPLQPVLQPPPPTAISQPA----------SPFQGNAFLTSQPVPVGVVPALQPAFVP 448
AP P PP + +S P SP + L+++P P + + + VP
Sbjct: 748 -KPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVP 806
Query: 449 AQSYPVA 455
P A
Sbjct: 807 TTKTPAA 813
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 47.0 bits (110), Expect = 5e-05
Identities = 90/426 (21%), Positives = 141/426 (33%), Gaps = 50/426 (11%)
Query: 168 TATFDASRTTFTREG-SFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAP 226
T+T +TT +E S T+A + A +++ + KAET ++ P T P
Sbjct: 255 TSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVLAK--PTPKAET------TTKGPALTTP 306
Query: 227 SPSSPTSPTSDATTSLEMNNPHAI------PRRHAPIE-QLARQGSFRGFPALSQKMSPF 279
+PT+P A+T+ + P I P+ AP + A P +++ +P
Sbjct: 307 KEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPT 366
Query: 280 --KRQLSLRINE-LPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSS 336
K E P+T + P + A + A + + T TP P
Sbjct: 367 TPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEP 426
Query: 337 APMTKPVTVVAPQSPTFQGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQ 396
AP TK P+ P + + P TP E + ++
Sbjct: 427 APTTKEPAPTTPKEPAPTAPKKPAPTTPKEPA------PTTPKEPAPTTTKEPSPTTPKE 480
Query: 397 PQASAAPLQPVL--QPPPPTAISQPASPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPV 454
P + P +P P T S P +P + + T +P P P + P
Sbjct: 481 PAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPT----------TPKEPAPT 530
Query: 455 ANGMPYPAPNVPVVGITPSQMVANVFGTAGHPQAAHPHQSPSLVRQQTFPHYEASSATTS 514
P P TP + T P P + ++T P T+
Sbjct: 531 TPKKPAPTTPKEPAPTTPKEPAPT---TTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTT 587
Query: 515 PFFKPPAQHLNGSAAFNGVDDGRLASADRHTEVPTGTCPVDPF-EAQWAALENKSKQRTN 573
P + L + A E PT T P +P AA N K+
Sbjct: 588 P------EKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKE--- 638
Query: 574 PSPTNP 579
P+PT P
Sbjct: 639 PAPTTP 644
Score = 36.2 bits (82), Expect = 0.087
Identities = 51/247 (20%), Positives = 81/247 (32%), Gaps = 32/247 (12%)
Query: 221 PGNTAPSPSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFK 280
P T P +PT+P A T+ P+ AP + PA + P
Sbjct: 639 PAPTTPKEPAPTTPKEPAPTT---------PKETAPTTPKGTAPTTLKEPAPTTPKKPAP 689
Query: 281 RQLSLRINELPSTMQRKTDFPIKNAVPEV-EGEAESISSLCSQITNAFSTPEDPFSSAPM 339
++L+ P+T + T P +G A + + T P P +AP
Sbjct: 690 KELA------PTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPT 743
Query: 340 T-KPVTVVAPQSPTFQGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQ 398
T K P+ P + + G S + P+ K P+
Sbjct: 744 TLKEPAPTTPKKPAPKELAPTTTKGPTS----TTSDKPAPTTPKETAPTTPKEPAPTTPK 799
Query: 399 ASAAPLQPVLQPPPPTAISQPA----------SPFQGNAFLTSQPVPVGVVPALQPAFVP 448
AP P PP + +S P SP + L+++P P + + + VP
Sbjct: 800 -KPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVP 858
Query: 449 AQSYPVA 455
P A
Sbjct: 859 TTKTPAA 865
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 47.0 bits (110), Expect = 5e-05
Identities = 90/426 (21%), Positives = 141/426 (33%), Gaps = 50/426 (11%)
Query: 168 TATFDASRTTFTREG-SFRVTTATEQAEREEIMKQMQDAKKAETDKIVVGSSVAPGNTAP 226
T+T +TT +E S T+A + A +++ + KAET ++ P T P
Sbjct: 296 TSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVLAK--PTPKAET------TTKGPALTTP 347
Query: 227 SPSSPTSPTSDATTSLEMNNPHAI------PRRHAPIE-QLARQGSFRGFPALSQKMSPF 279
+PT+P A+T+ + P I P+ AP + A P +++ +P
Sbjct: 348 KEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPT 407
Query: 280 --KRQLSLRINE-LPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSS 336
K E P+T + P + A + A + + T TP P
Sbjct: 408 TPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEP 467
Query: 337 APMTKPVTVVAPQSPTFQGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQ 396
AP TK P+ P + + P TP E + ++
Sbjct: 468 APTTKEPAPTTPKEPAPTAPKKPAPTTPKEPA------PTTPKEPAPTTTKEPSPTTPKE 521
Query: 397 PQASAAPLQPVL--QPPPPTAISQPASPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPV 454
P + P +P P T S P +P + + T +P P P + P
Sbjct: 522 PAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPT----------TPKEPAPT 571
Query: 455 ANGMPYPAPNVPVVGITPSQMVANVFGTAGHPQAAHPHQSPSLVRQQTFPHYEASSATTS 514
P P TP + T P P + ++T P T+
Sbjct: 572 TPKKPAPTTPKEPAPTTPKEPAPT---TTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTT 628
Query: 515 PFFKPPAQHLNGSAAFNGVDDGRLASADRHTEVPTGTCPVDPF-EAQWAALENKSKQRTN 573
P + L + A E PT T P +P AA N K+
Sbjct: 629 P------EKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKE--- 679
Query: 574 PSPTNP 579
P+PT P
Sbjct: 680 PAPTTP 685
Score = 36.2 bits (82), Expect = 0.087
Identities = 51/247 (20%), Positives = 81/247 (32%), Gaps = 32/247 (12%)
Query: 221 PGNTAPSPSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFK 280
P T P +PT+P A T+ P+ AP + PA + P
Sbjct: 680 PAPTTPKEPAPTTPKEPAPTT---------PKETAPTTPKGTAPTTLKEPAPTTPKKPAP 730
Query: 281 RQLSLRINELPSTMQRKTDFPIKNAVPEV-EGEAESISSLCSQITNAFSTPEDPFSSAPM 339
++L+ P+T + T P +G A + + T P P +AP
Sbjct: 731 KELA------PTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPT 784
Query: 340 T-KPVTVVAPQSPTFQGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQ 398
T K P+ P + + G S + P+ K P+
Sbjct: 785 TLKEPAPTTPKKPAPKELAPTTTKGPTS----TTSDKPAPTTPKETAPTTPKEPAPTTPK 840
Query: 399 ASAAPLQPVLQPPPPTAISQPA----------SPFQGNAFLTSQPVPVGVVPALQPAFVP 448
AP P PP + +S P SP + L+++P P + + + VP
Sbjct: 841 -KPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVP 899
Query: 449 AQSYPVA 455
P A
Sbjct: 900 TTKTPAA 906
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 46.6 bits (109), Expect = 6e-05
Identities = 93/387 (24%), Positives = 144/387 (37%), Gaps = 74/387 (19%)
Query: 224 TAPSPSS-PTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQK-MSPFKR 281
T P+P+S P + A ++ + P + P+ + G P+L+ SP
Sbjct: 1446 TLPAPASAPLTIPISAPLTVSASGPALLTSVTPPLAPVVPAAP--GPPSLAPSGASPSAS 1503
Query: 282 QLSLRINELPSTMQRKTD------FPIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFS 335
L+L + PS +T P + VP G +++ CS + S PF
Sbjct: 1504 ALTLGLATAPSLSSSQTPGHPLLLAPTSSHVP---GLNSTVAPACSPVLVPASALASPFP 1560
Query: 336 SAPMTKP--VTVVAPQSPTFQGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVR 393
SAP P +++AP S S A+P P A + ++
Sbjct: 1561 SAPNPAPAQASLLAPAS--------SASQALATP--------LAPMAAPQ------TAIL 1598
Query: 394 AQQPQASAAPLQPVLQPPP-----------PTAISQPASPFQGNAFLTSQPVPVG---VV 439
A P APL PVL P P P + P+S G + ++ PVP +
Sbjct: 1599 APSPAPPLAPL-PVLAPSPGAAPVLASSQTPVPVMAPSST-PGTSLASASPVPAPTPVLA 1656
Query: 440 PALQPAFVPAQSYPVANGMPYPAPNVPVV----------GITPSQMVANVFGTAGHPQAA 489
P+ +PA PV + +P PA + G +PSQ ++ GT G+PQ
Sbjct: 1657 PSSTQTMLPA---PVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLS--LGT-GNPQGP 1710
Query: 490 HPHQSPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAAFNGVDDGRLASADRHTEVPT 549
P Q+ SL + A + + +P PP L + + LA A P
Sbjct: 1711 FPTQTLSLTPASSLVPTPAQTLSLAP--GPP---LGPTQTLSLAPAPPLAPASPVGPAPA 1765
Query: 550 GTCPVDPFEAQWAALENKSKQRTNPSP 576
T + P + + L S Q SP
Sbjct: 1766 HTLTLAPASSSASLLAPASVQTLTLSP 1792
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 45.4 bits (106), Expect = 1e-04
Identities = 45/180 (25%), Positives = 66/180 (36%), Gaps = 11/180 (6%)
Query: 397 PQASAAPLQPVLQPPPPTAISQPASPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVAN 456
P A QP QPP P + P Q P G PAF P SYP
Sbjct: 3045 PSGPTAFQQPRFQPPAPQYSAGSGGPTQNGFPAHQAPTYPGPSTYPAPAFPPGASYPAEP 3104
Query: 457 GMPYP---APNVPVVGITPSQMV-ANVFGTAGHPQA--AHPHQSPSLVRQQTFP-HYEAS 509
G+P P G TP + +F +A P Q+ +Q P +YE
Sbjct: 3105 GLPNQQAFRPTGHYAGQTPMPTTQSTLFPVPADSRAPLQKPRQTSLADLEQKVPTNYEVI 3164
Query: 510 SATTSPFFKPPAQ-HLNGSAAFNGVDDGRLASADR---HTEVPTGTCPVDPFEAQWAALE 565
++ P P++ +G A +G + G++ R V P P ++ + +LE
Sbjct: 3165 ASPVVPMSSAPSETSYSGPAVSSGYEQGKVPEVPRAGDRGSVSQSPAPTYPSDSHYTSLE 3224
Score = 30.4 bits (67), Expect = 4.8
Identities = 80/331 (24%), Positives = 117/331 (35%), Gaps = 59/331 (17%)
Query: 180 REGSFRVTTATEQAEREEIMKQMQDAKKAETDKIVV-GSSVAPGNTAPSPSSPTSPTSDA 238
R+ S R E ++E KQ +A+ A D + G + PG SP+ +P S +
Sbjct: 1271 RQASSRDLAFAEDKKKE---KQFLNAESAYMDPMKQNGGPLTPGT---SPTQLAAPVSFS 1324
Query: 239 T-TSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFK--RQLSLRINELPSTMQ 295
T TS + + IP + Q + + S SP +++ + ++ P T
Sbjct: 1325 TPTSSDSSGGRVIP--DVRVTQHFAKETQDPLKLHSSPASPSSASKEIGMPFSQGPGTPA 1382
Query: 296 RKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMTKPV---TVVAPQSPT 352
P +P G S S+ + + S+ + +P T T PQ+P
Sbjct: 1383 TTAVAPCPAGLPR--GYMTPASPAGSERSPSPSSTAHSYGHSPTTANYGSQTEDLPQAP- 1439
Query: 353 FQGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRAQQPQASAAP-LQPVLQPP 411
SG A+ G R P A + RA AS++P L P
Sbjct: 1440 ---------SGLAAAG---RAAREKPLSASDGEGGTPQPSRAYSYFASSSPPLSPSSPSE 1487
Query: 412 PPTAISQPASPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGIT 471
PT P F T P P PA P + G P T
Sbjct: 1488 SPTFSPGKMGPRATAEFSTQTPSPA-----------PASDMPRSPGAP-----------T 1525
Query: 472 PSQMVANVFGTAGHPQAAHPHQSPSLVRQQT 502
PS MVA GT Q H +P LV Q++
Sbjct: 1526 PSPMVAQ--GT----QTPHRPSTPRLVWQES 1550
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 45.1 bits (105), Expect = 2e-04
Identities = 75/309 (24%), Positives = 108/309 (34%), Gaps = 43/309 (13%)
Query: 215 VGSSVAPGNTAPSPSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQG-SFRGFPALS 273
V S+ T PSP++ P++ L+ ++ P+ AR G S RG P
Sbjct: 209 VSSASEHSTTEPSPAARRRPSAGG--GLQRPASRSLSSSATPLSSPARSGPSARGTPRAP 266
Query: 274 QKMSPFKRQLSLRINELPSTMQRK---------TDFPIKNAVPEVEGEAESISSL----- 319
S K + + T RK + P+ P ++++ +L
Sbjct: 267 AHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPH 326
Query: 320 CSQITNAFSTP---EDPFSSAPMTKPVTVVAPQSPTFQGTEWGQSSGAASPGLFQAGHRR 376
S +T +TP P SAP + P +P Q T + SP L QA H
Sbjct: 327 SSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAT-----TSLGSPTL-QATHSF 380
Query: 377 TPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPP---------PTAISQPASPFQGNA 427
PS + PQA A P LQ PP P A P +P
Sbjct: 381 LPSPP-------LSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAV 433
Query: 428 FLTSQPVPVGVVPALQPAFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVFGTAG-HP 486
L P P +Q F P S PV+ P+ P + P Q+ + + P
Sbjct: 434 HLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSP 493
Query: 487 QAAHPHQSP 495
A P Q+P
Sbjct: 494 SATPPPQAP 502
Score = 34.3 bits (77), Expect = 0.33
Identities = 78/329 (23%), Positives = 114/329 (34%), Gaps = 56/329 (17%)
Query: 217 SSVAPGNTAPSPSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKM 276
S AP + PS P +P S ATTSL +P Q SF P LS
Sbjct: 344 SPSAPPSLQTLPSPPATPPSQATTSLG-----------SPTLQATH--SFLPSPPLSPLA 390
Query: 277 SPFKRQL-SLRINELPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNA-FSTPEDPF 334
+P + +L + L + P+ P ++ ++L + A FS P P
Sbjct: 391 TPPPQAPPALALPPLQAPPSPPASPPLS---PLATPSPQAPNALAVHLLQAPFSPPPSPP 447
Query: 335 SSAPMTKPVTVVAPQSPTFQGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRA 394
AP + P + P SP+ S AA P +V S A
Sbjct: 448 VQAPFSPPAS--PPVSPSATPPSQAPPSLAAPP------------------LQVPPSPPA 487
Query: 395 QQPQASAAPLQPVLQPPPPTAISQPASPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPV 454
P + +A PPP A A+P A Q P P LQ P S+P
Sbjct: 488 SPPMSPSAT-------PPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFP- 539
Query: 455 ANGMPY-PAPNVPVVGI-TPSQMVANVFGTAGHPQAAHPHQSPSLVRQQTFPHYEASSAT 512
P+ P+ ++P+ + TP V P SP+L + P ++
Sbjct: 540 -GQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSV 598
Query: 513 TSPFF-------KPPAQHLNGSAAFNGVD 534
+ P PP + S+ +G D
Sbjct: 599 SGPRLTLALAPGPPPPPSRSPSSTLSGPD 627
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 45.1 bits (105), Expect = 2e-04
Identities = 73/292 (25%), Positives = 101/292 (34%), Gaps = 39/292 (13%)
Query: 215 VGSSVAPGNTAPSPSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQG-SFRGFPALS 273
V S+ T PSP++ P++ L+ ++ P+ AR G S RG P
Sbjct: 200 VSSASEHSTTEPSPAARRRPSAGG--GLQRPASRSLSSSATPLSSPARSGPSARGTPRAP 257
Query: 274 QKMSPFKRQLSLRINELPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPEDP 333
S K + L + + P K+A P ++ L S S P
Sbjct: 258 AHPSQPKPK------GLQALRPPQVTPPRKDAAP-------ALGPLSSSPLATPSPSAPP 304
Query: 334 FSSAPMTKPVTVVAPQSPTFQGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVR 393
SAP + P +P Q T + SP L QA H PS +
Sbjct: 305 SPSAPPSLQTLPSPPATPPSQAT-----TSLGSPTL-QATHSFLPSPP-------LSPLA 351
Query: 394 AQQPQASAAPLQPVLQPPP---------PTAISQPASPFQGNAFLTSQPVPVGVVPALQP 444
PQA A P LQ PP P A P +P L P P +Q
Sbjct: 352 TPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQA 411
Query: 445 AFVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVFGTAG-HPQAAHPHQSP 495
F P S PV+ P+ P + P Q+ + + P A P Q+P
Sbjct: 412 PFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAP 463
Score = 34.3 bits (77), Expect = 0.33
Identities = 78/329 (23%), Positives = 114/329 (34%), Gaps = 56/329 (17%)
Query: 217 SSVAPGNTAPSPSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKM 276
S AP + PS P +P S ATTSL +P Q SF P LS
Sbjct: 305 SPSAPPSLQTLPSPPATPPSQATTSLG-----------SPTLQATH--SFLPSPPLSPLA 351
Query: 277 SPFKRQL-SLRINELPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNA-FSTPEDPF 334
+P + +L + L + P+ P ++ ++L + A FS P P
Sbjct: 352 TPPPQAPPALALPPLQAPPSPPASPPLS---PLATPSPQAPNALAVHLLQAPFSPPPSPP 408
Query: 335 SSAPMTKPVTVVAPQSPTFQGTEWGQSSGAASPGLFQAGHRRTPSEADRWLEEVSKSVRA 394
AP + P + P SP+ S AA P +V S A
Sbjct: 409 VQAPFSPPAS--PPVSPSATPPSQAPPSLAAPP------------------LQVPPSPPA 448
Query: 395 QQPQASAAPLQPVLQPPPPTAISQPASPFQGNAFLTSQPVPVGVVPALQPAFVPAQSYPV 454
P + +A PPP A A+P A Q P P LQ P S+P
Sbjct: 449 SPPMSPSAT-------PPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFP- 500
Query: 455 ANGMPY-PAPNVPVVGI-TPSQMVANVFGTAGHPQAAHPHQSPSLVRQQTFPHYEASSAT 512
P+ P+ ++P+ + TP V P SP+L + P ++
Sbjct: 501 -GQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSV 559
Query: 513 TSPFF-------KPPAQHLNGSAAFNGVD 534
+ P PP + S+ +G D
Sbjct: 560 SGPRLTLALAPGPPPPPSRSPSSTLSGPD 588
>gi|7662236 TSC22 domain family, member 2 [Homo sapiens]
Length = 780
Score = 44.3 bits (103), Expect = 3e-04
Identities = 56/212 (26%), Positives = 76/212 (35%), Gaps = 53/212 (25%)
Query: 311 GEAESISSLCSQITNAFSTPEDPFSSAPMTKPVT--VVAPQSPTFQGTEWGQSSGAASPG 368
G ++ SS+ +Q+ A S P + + AP T P VAP PT G G P
Sbjct: 414 GTGQNASSVGAQLMGASSQPSE--AMAPRTGPAQGGQVAPCQPT--GVPPATVGGVVQPC 469
Query: 369 LFQAGHRRTPSEADRWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPASPFQGNAF 428
L AG A QPQ+ PPP S P S G
Sbjct: 470 LGPAG--------------------AGQPQSV---------PPPQMGGSGPLSAVPGG-- 498
Query: 429 LTSQPVPVGVVPALQ--PAFVPAQSYPVANGMPYPAPNVP--------VVGITPSQMVAN 478
P VVP + PA VPA S P + PNVP + TP ++
Sbjct: 499 ------PHAVVPGVPNVPAAVPAPSVPSVSTTSVTMPNVPAPLAQSQQLSSHTPVSRSSS 552
Query: 479 VFGTAGHPQAAHPHQSPSLVRQQTFPHYEASS 510
+ G P A H +P+ + Q ++ +
Sbjct: 553 IIQHVGLPLAPGTHSAPTSLPQSDLSQFQTQT 584
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 43.9 bits (102), Expect = 4e-04
Identities = 69/306 (22%), Positives = 104/306 (33%), Gaps = 49/306 (16%)
Query: 228 PSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRG-------------FPALSQ 274
P P SP NNP P H P + + S FP+ S
Sbjct: 72 PKLPPSP----------NNPPKFPNPHQPPKHPDKNSSVVNPTLVATTQIPSVTFPSAST 121
Query: 275 KMSPFKRQLSLRINELPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPEDPF 334
K++ L N + + + A + + T + +TP P
Sbjct: 122 KITTLPNVTFLPQNATTISSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPS 181
Query: 335 SSAPMTKPVTVVAPQSPTFQGTEWGQSSGA-----ASPGLFQAGHRRTPSEA---DRWLE 386
SSAP P T AP +P+ T+ SS A A+P A PS + +
Sbjct: 182 SSAP---PETTAAPPTPSAT-TQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAA 237
Query: 387 EVSKSVRAQQPQASAAPLQPVLQPPPPTAIS-QPASPFQGNAFLTSQPVPVGVVPALQPA 445
+ S P +S+AP + PP P+A + P+S + P P PA
Sbjct: 238 PPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPA---- 293
Query: 446 FVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVFGTAGHPQAAHPHQSPSLVRQQTFPH 505
P ++ P P+ TP+ + AA HQ+ + V QT
Sbjct: 294 -------PPSSPAPQETTAAPIT--TPNSSPTTLAPDTSETSAAPTHQTTTSVTTQTTTT 344
Query: 506 YEASSA 511
+ +SA
Sbjct: 345 KQPTSA 350
Score = 39.7 bits (91), Expect = 0.008
Identities = 61/305 (20%), Positives = 103/305 (33%), Gaps = 33/305 (10%)
Query: 269 FPALSQKMSPFKRQLSLRINE-----LPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQI 323
+P L PF R+ +++ LP + FP + P+ + S+ +
Sbjct: 48 YPGLLAHQKPFIRKSYKCLHKRCRPKLPPSPNNPPKFPNPHQPPKHPDKNSSVVNPTLVA 107
Query: 324 TNAFSTPEDPFSSAPMTK-PVTVVAPQSPTFQGTEWGQSSGAASPGLFQAGHRRTPSEAD 382
T + P +S +T P PQ+ T + ++ ++ L +P+ D
Sbjct: 108 TTQIPSVTFPSASTKITTLPNVTFLPQNATTISSRENVNTSSSVATLAPVN---SPAPQD 164
Query: 383 RWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQ-PASPFQGNAFLTSQPVPVGVVPA 441
+ S P +S+AP + PP P+A +Q P S + P P PA
Sbjct: 165 TTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPA 224
Query: 442 LQPAFVPAQS------------YPVANGMPYPAPNVPVVGITPSQMVANVFGTAGHPQAA 489
+ P ++ P+++ P P V TPS + + P+
Sbjct: 225 PPSSSAPPETTAAPPTPSATTPAPLSSSAP---PETTAVPPTPSATTLDPSSASAPPETT 281
Query: 490 HPHQSPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAAFNGVDDGRLASADRH---TE 546
+PS T +P P N S D ++A H T
Sbjct: 282 AAPPTPSATTPAPPSSPAPQETTAAPITTP-----NSSPTTLAPDTSETSAAPTHQTTTS 336
Query: 547 VPTGT 551
V T T
Sbjct: 337 VTTQT 341
Score = 30.4 bits (67), Expect = 4.8
Identities = 32/136 (23%), Positives = 48/136 (35%), Gaps = 12/136 (8%)
Query: 221 PGNTAPSPSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFK 280
P ++AP ++ PT ATT A P AP E A + PA + +P
Sbjct: 180 PSSSAPPETTAAPPTPSATT-------QAPPSSSAPPETTAAPPT---PPATTP--APPS 227
Query: 281 RQLSLRINELPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMT 340
P T T P+ ++ P S + ++ S P + ++ P
Sbjct: 228 SSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTP 287
Query: 341 KPVTVVAPQSPTFQGT 356
T P SP Q T
Sbjct: 288 SATTPAPPSSPAPQET 303
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 43.9 bits (102), Expect = 4e-04
Identities = 69/306 (22%), Positives = 104/306 (33%), Gaps = 49/306 (16%)
Query: 228 PSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRG-------------FPALSQ 274
P P SP NNP P H P + + S FP+ S
Sbjct: 72 PKLPPSP----------NNPPKFPNPHQPPKHPDKNSSVVNPTLVATTQIPSVTFPSAST 121
Query: 275 KMSPFKRQLSLRINELPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPEDPF 334
K++ L N + + + A + + T + +TP P
Sbjct: 122 KITTLPNVTFLPQNATTISSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPS 181
Query: 335 SSAPMTKPVTVVAPQSPTFQGTEWGQSSGA-----ASPGLFQAGHRRTPSEA---DRWLE 386
SSAP P T AP +P+ T+ SS A A+P A PS + +
Sbjct: 182 SSAP---PETTAAPPTPSAT-TQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAA 237
Query: 387 EVSKSVRAQQPQASAAPLQPVLQPPPPTAIS-QPASPFQGNAFLTSQPVPVGVVPALQPA 445
+ S P +S+AP + PP P+A + P+S + P P PA
Sbjct: 238 PPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPA---- 293
Query: 446 FVPAQSYPVANGMPYPAPNVPVVGITPSQMVANVFGTAGHPQAAHPHQSPSLVRQQTFPH 505
P ++ P P+ TP+ + AA HQ+ + V QT
Sbjct: 294 -------PPSSPAPQETTAAPIT--TPNSSPTTLAPDTSETSAAPTHQTTTSVTTQTTTT 344
Query: 506 YEASSA 511
+ +SA
Sbjct: 345 KQPTSA 350
Score = 39.7 bits (91), Expect = 0.008
Identities = 61/305 (20%), Positives = 103/305 (33%), Gaps = 33/305 (10%)
Query: 269 FPALSQKMSPFKRQLSLRINE-----LPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQI 323
+P L PF R+ +++ LP + FP + P+ + S+ +
Sbjct: 48 YPGLLAHQKPFIRKSYKCLHKRCRPKLPPSPNNPPKFPNPHQPPKHPDKNSSVVNPTLVA 107
Query: 324 TNAFSTPEDPFSSAPMTK-PVTVVAPQSPTFQGTEWGQSSGAASPGLFQAGHRRTPSEAD 382
T + P +S +T P PQ+ T + ++ ++ L +P+ D
Sbjct: 108 TTQIPSVTFPSASTKITTLPNVTFLPQNATTISSRENVNTSSSVATLAPVN---SPAPQD 164
Query: 383 RWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQ-PASPFQGNAFLTSQPVPVGVVPA 441
+ S P +S+AP + PP P+A +Q P S + P P PA
Sbjct: 165 TTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTPA 224
Query: 442 LQPAFVPAQS------------YPVANGMPYPAPNVPVVGITPSQMVANVFGTAGHPQAA 489
+ P ++ P+++ P P V TPS + + P+
Sbjct: 225 PPSSSAPPETTAAPPTPSATTPAPLSSSAP---PETTAVPPTPSATTLDPSSASAPPETT 281
Query: 490 HPHQSPSLVRQQTFPHYEASSATTSPFFKPPAQHLNGSAAFNGVDDGRLASADRH---TE 546
+PS T +P P N S D ++A H T
Sbjct: 282 AAPPTPSATTPAPPSSPAPQETTAAPITTP-----NSSPTTLAPDTSETSAAPTHQTTTS 336
Query: 547 VPTGT 551
V T T
Sbjct: 337 VTTQT 341
Score = 30.4 bits (67), Expect = 4.8
Identities = 32/136 (23%), Positives = 48/136 (35%), Gaps = 12/136 (8%)
Query: 221 PGNTAPSPSSPTSPTSDATTSLEMNNPHAIPRRHAPIEQLARQGSFRGFPALSQKMSPFK 280
P ++AP ++ PT ATT A P AP E A + PA + +P
Sbjct: 180 PSSSAPPETTAAPPTPSATT-------QAPPSSSAPPETTAAPPT---PPATTP--APPS 227
Query: 281 RQLSLRINELPSTMQRKTDFPIKNAVPEVEGEAESISSLCSQITNAFSTPEDPFSSAPMT 340
P T T P+ ++ P S + ++ S P + ++ P
Sbjct: 228 SSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTP 287
Query: 341 KPVTVVAPQSPTFQGT 356
T P SP Q T
Sbjct: 288 SATTPAPPSSPAPQET 303
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.128 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,637,940
Number of Sequences: 37866
Number of extensions: 1374893
Number of successful extensions: 10138
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 587
Number of HSP's that attempted gapping in prelim test: 8156
Number of HSP's gapped (non-prelim): 2029
length of query: 592
length of database: 18,247,518
effective HSP length: 108
effective length of query: 484
effective length of database: 14,157,990
effective search space: 6852467160
effective search space used: 6852467160
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.