TCERG1 12850

Name: TCERG1	Sequence: fasta or formatted (1098aa)		NCBI GI: 21327715
Description: transcription elongation regulator 1 isoform 1		Referenced in: RNA Polymerase and General Transcription Factors WW Domain
Other entries for this name: alt prot [1077aa] transcription elongation regulator 1 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.9 109 3 C cysteine 0.4 4 1 D aspartate 4.5 49 2 E glutamate 10.0 110 3 F phenylalanine 3.0 33 2 G glycine 3.0 33 2 H histidine 1.4 15 2 I isoleucine 3.9 43 2 K lysine 8.9 98 3 L leucine 5.1 56 3 M methionine 3.5 38 2 N asparagine 1.7 19 2 P proline 10.8 119 5 Q glutamine 6.8 75 3 R arginine 6.3 69 2 S serine 6.1 67 3 T threonine 6.6 73 4 V valine 5.2 57 2 W tryptophan 1.2 13 1 Y tyrosine 1.6 18 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transcription elongation regulator 1 isoform 1 [Homo... TCERG1 0.976 transcription elongation regulator 1 isoform 2 [Homo... TCERG1L 0.114 transcription elongation regulator 1-like PRPF40B 0.049 Huntingtin interacting protein C isoform 1 PRPF40A 0.046 formin binding protein 3 PRPF40B 0.040 Huntingtin interacting protein C isoform 2 TCHH 0.034 trichohyalin LOC283685 0.031 PREDICTED: golgi autoantigen, golgin subfamily a-li... FLJ22184 0.027 PREDICTED: hypothetical protein FLJ22184 WBP11 0.027 WW domain binding protein 11 FMN2 0.027 formin 2 GOLGA4 0.027 golgi autoantigen, golgin subfamily a, 4 CPSF6 0.025 cleavage and polyadenylation specific factor 6, 68 ... WASF2 0.025 WAS protein family, member 2 FMN1 0.024 formin 1 KIAA0754 0.024 hypothetical protein LOC643314 NACA 0.024 nascent polypeptide-associated complex alpha subuni... SETD1B 0.024 SET domain containing 1B LOC727832 0.024 golgi autoantigen, golgin subfamily a-like LOC283685 0.024 PREDICTED: golgi autoantigen, golgin subfamily a-li... ZNF207 0.023 zinc finger protein 207 isoform a C6orf132 0.023 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.023 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.023 PREDICTED: hypothetical protein LOC647024 ZNF207 0.023 zinc finger protein 207 isoform c WASL 0.023 Wiskott-Aldrich syndrome gene-like protein SF3A2 0.023 splicing factor 3a, subunit 2 BPTF 0.023 bromodomain PHD finger transcription factor isoform ... PCLO 0.023 piccolo isoform 2 PCLO 0.023 piccolo isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.