Guide to the Human Genome
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Name: IGLL1 Sequence: fasta or formatted (213aa) NCBI GI: 13399298
Description:

immunoglobulin lambda-like polypeptide 1 isoform a precursor

Referenced in:

B cells

Other entries for this name:
alt prot [84aa] immunoglobulin lambda-like polypeptide 1 isoform b precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         14           2
 C cysteine            1.9          4           1
 D aspartate           0.9          2           1
 E glutamate           4.2          9           2
 F phenylalanine       2.3          5           1
 G glycine            10.3         22           2
 H histidine           1.9          4           1
 I isoleucine          0.9          2           1
 K lysine              3.3          7           1
 L leucine            10.3         22           4
 M methionine          1.9          4           1
 N asparagine          2.8          6           2
 P proline             8.9         19           2
 Q glutamine           5.6         12           1
 R arginine            7.0         15           2
 S serine             11.7         25           2
 T threonine           8.9         19           2
 V valine              5.6         12           2
 W tryptophan          2.8          6           1
 Y tyrosine            1.9          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   immunoglobulin lambda-like polypeptide 1 isoform a p... 
IGLL3                 0.620   immunoglobulin lambda-like polypeptide 3 
LOC100290481          0.445   PREDICTED: hypothetical protein XP_002348153 
IGLL1                 0.286   immunoglobulin lambda-like polypeptide 1 isoform b p...
LOC100294459          0.099   PREDICTED: similar to immunoglobulin lambda-like po...
LOC100133678          0.077   PREDICTED: similar to major histocompatibility comp...
LOC100294277          0.077   PREDICTED: similar to major histocompatibility comp...
LOC100294114          0.077   PREDICTED: similar to major histocompatibility comp...
HLA-DQA1              0.072   major histocompatibility complex, class II, DQ alpha...
HLA-DRB3              0.072   major histocompatibility complex, class II, DR beta ...
LOC731682             0.072   PREDICTED: similar to major histocompatibility comp...
LOC100294317          0.072   PREDICTED: similar to MHC HLA-DQ alpha 
LOC100294275          0.072   PREDICTED: similar to major histocompatibility comp...
LOC100294275          0.072   PREDICTED: similar to major histocompatibility comp...
LOC100294190          0.072   PREDICTED: similar to major histocompatibility comp...
LOC100294162          0.072   PREDICTED: similar to major histocompatibility comp...
LOC731682             0.070   PREDICTED: similar to major histocompatibility comp...
LOC100133811          0.070   PREDICTED: similar to HLA class II histocompatibili...
LOC100289760          0.070   PREDICTED: hypothetical protein XP_002347518, parti...
LOC100294224          0.070   PREDICTED: similar to MHC class II antigen 
HLA-DRB5              0.070   major histocompatibility complex, class II, DR beta ...
LOC100290966          0.067   PREDICTED: hypothetical protein XP_002346811 
HLA-DOA               0.067   major histocompatibility complex, class II, DO alpha ...
HLA-DQA2              0.065   major histocompatibility complex, class II, DQ alpha...
LOC100294468          0.065   PREDICTED: similar to HLA class II histocompatibili...
LOC100294189          0.065   PREDICTED: similar to HLA class II histocompatibili...
LOC100294189          0.065   PREDICTED: similar to HLA class II histocompatibili...
LOC100294161          0.065   PREDICTED: similar to HLA class II histocompatibili...
LOC100294161          0.065   PREDICTED: similar to HLA class II histocompatibili...
HLA-DPA1              0.062   major histocompatibility complex, class II, DP alpha...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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