Guide to the Human Genome
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Name: IGLL3 Sequence: fasta or formatted (224aa) NCBI GI: 61966693
Description:

immunoglobulin lambda-like polypeptide 3

Referenced in:

B cells

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         16           2
 C cysteine            3.1          7           1
 D aspartate           1.8          4           1
 E glutamate           4.0          9           2
 F phenylalanine       2.2          5           1
 G glycine             7.6         17           1
 H histidine           3.6          8           1
 I isoleucine          0.9          2           1
 K lysine              3.6          8           1
 L leucine             8.9         20           2
 M methionine          2.2          5           1
 N asparagine          1.8          4           1
 P proline            10.3         23           3
 Q glutamine           5.4         12           1
 R arginine            4.9         11           2
 S serine             11.6         26           2
 T threonine           9.4         21           2
 V valine              5.4         12           1
 W tryptophan          3.6          8           1
 Y tyrosine            2.7          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   immunoglobulin lambda-like polypeptide 3 
IGLL1                 0.568   immunoglobulin lambda-like polypeptide 1 isoform a p...
LOC100290481          0.383   PREDICTED: hypothetical protein XP_002348153 
LOC100294459          0.079   PREDICTED: similar to immunoglobulin lambda-like po...
LOC100133678          0.062   PREDICTED: similar to major histocompatibility comp...
LOC100294277          0.062   PREDICTED: similar to major histocompatibility comp...
LOC100294114          0.062   PREDICTED: similar to major histocompatibility comp...
HLA-DQA1              0.057   major histocompatibility complex, class II, DQ alpha...
LOC731682             0.055   PREDICTED: similar to major histocompatibility comp...
LOC100294317          0.055   PREDICTED: similar to MHC HLA-DQ alpha 
LOC100294190          0.055   PREDICTED: similar to major histocompatibility comp...
LOC100294162          0.055   PREDICTED: similar to major histocompatibility comp...
HLA-DRB3              0.055   major histocompatibility complex, class II, DR beta ...
LOC731682             0.055   PREDICTED: similar to major histocompatibility comp...
LOC100294275          0.055   PREDICTED: similar to major histocompatibility comp...
LOC100294275          0.055   PREDICTED: similar to major histocompatibility comp...
LOC100294224          0.055   PREDICTED: similar to MHC class II antigen 
LOC100289760          0.055   PREDICTED: hypothetical protein XP_002347518, parti...
LOC100133811          0.053   PREDICTED: similar to HLA class II histocompatibili...
HLA-DRB5              0.053   major histocompatibility complex, class II, DR beta ...
HLA-DQA2              0.051   major histocompatibility complex, class II, DQ alpha...
LOC100290966          0.051   PREDICTED: hypothetical protein XP_002346811 
LOC100294468          0.048   PREDICTED: similar to HLA class II histocompatibili...
LOC100294189          0.048   PREDICTED: similar to HLA class II histocompatibili...
LOC100294189          0.048   PREDICTED: similar to HLA class II histocompatibili...
LOC100294161          0.048   PREDICTED: similar to HLA class II histocompatibili...
LOC100294161          0.048   PREDICTED: similar to HLA class II histocompatibili...
LOC100294276          0.046   PREDICTED: similar to major histocompatibility comp...
LOC100294276          0.046   PREDICTED: similar to major histocompatibility comp...
HLA-DOA               0.046   major histocompatibility complex, class II, DO alpha ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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